XLOC_034629 (gene) - C. hemisphaerica

Overview
NameXLOC_034629
Unique NameXLOC_034629
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_247:240712..249568+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034629 ID=XLOC_034629|Name=XLOC_034629|organism=Clytia hemisphaerica|type=gene|length=8857bp|location=Sequence derived from alignment at scaffold_247:240712..249568+ (Clytia hemisphaerica)
CTGGATAATCACAGTCATGCTGACGTCATTCTTCATTTTATGtggtaata ttcaattttatttttcacatttttcgtcCATGATGGACCTGTCAGTTTCA GTTCATTTCAACGTCTGCTTGTAAGCTCGTAACTGCCAGGTATCGTAGTT AAACAACCTGCACTGTTTCACTTTTATCTATTCTTATAGGATCCAGTAAA ATTTCTGTTGAGGGTTCGgttgtttcaatttttatgacactttgcacctg aaattgttttttttctggtcTTTTTTTGGGGTTATCTTTAATATTGGGTT ATTTCAGACTTACCCTAAATAAATTGACCATTTATTTGCCTAAAGCTCAA TCATTCTAGGTTCAGCATGTTCCtaaattgttctcattttttcagCAGAT CTTAGCCTCGTTGTTCGTATAACATTTTCCTTACAGAAAGGGTCAATGCT AGTGTTAGTTTATGCCACAATAACCAGCACTGCTTATCGAATCATGTGTG TATTCAAGCGTGACACTGATTGACAGGGCCAATTTTTGTCTCTTTATCGA TTAGTCCTGTGTTTTCTTGTTATgaatttttctgagaaaaaaaccTTAGG TTTTATTTTGGCATCAAATACAAAAGTTAATGAAAAGAGGTGGCTTTAGC AAAATAAATCAagatcaaaatacaaaaataatttcacaAGAGATTCCATT TGATGTATACATATTGTCAATTATAGACCTATGTGTTCTGGTCACGACTA ATTCTGAGAAAAATTTGGacctttaaaatttaaaattaacaaaaagtgac tcagcaaaaaatatcaaaacaaaaaaaatttccaacttttCTAAGTACTG GTCAATTTGGTCATAAAGATccaagacaaaaaaaaaataaattcagatTG TAAACCAATTTTCAGTTTCATTACAGTGGCATCTGAATGTCAAAACAATT AACGAAGGAGAGTTTAAATCCCCATAGGCATTACAAACAAGTCAACCCCA TTGCCATCGGACATCCTTCACTGACTCGAAGCCAACAATACGTTACATCC TGAAAATAAAGTTTGCATAAAAttgcaccataatatggaaagtaCAAAAT CGTCTTTGGTTAAGGAACTACTAAATTCGGTCAAGCGTGATTTCACCTTC GATTATCCGAAAGATTTTTTCGAAGCTCGGTTCGTCCGCTATCACTTCTC AACTTGCATAAAAGCGTTAGAATAACATCCATCAAACCATCATAACTCCC TCATGACGCTATTTTCATAGTGTGCATTATGACGGTTACGCACAACAATG TGTTACACAATAAGTTTTACCGGAAGATAACGGTGGGCAAGTTTATGTTA TTCCGGATGTTTCCAGATTAATCTTATGGCCCGAGCATCGAATGAAATTC CCTTGGGTATCCTCAACTACGTAAATGAGTTTTATTTTTGTGCGATTTCT GTTCCATCATGCCGATCTGTGCAAGGTATAAAATCAGTGAAGTTTACACA AAATCATTTGAATAGCAATCAAACTTGGTCAGGTGGAAGCACACTCAAAT ATAACAGCAGAAGTTGGAAAATAACTTTGGTTGAGGGATCCGAGATGTCA AATTATTGCTTTCTCCTGATTTTGATGGTATTTTCTTTCCAAGGTAGGTG AATGCGCTGAAAATAGGGCTATTTAATCAGATAATAGGGCTATTTAATCA TGAAAAAAACGTGAAACTCTTGATTTTAAGGTCCTTGACAAAGAGGCACA GTTTGTCGGTTGGGTAAACGTGACAGGTGTTAGTTAAATGGACAATCAGG AAGTCAGAGGATTATTTTTACCTGgagatttgatttatttttctaacGAA TTTAAAACATTAAACCAGAGTACAGAGTACAGTAAATGACCATGTTCATA AGATCATCAGGTTTTATAATTGTGTATACCGCAAGacctatttccaaaaa aaaaggaaattctttACGTTCAattctgaaatctttttttaggAAACATT TtcccaataaaatttttttactaATGTTTGATTCTTCATAAATATTCCAG GTGGCCCTAAAAGTTGAAAAAccgagaaaaagtgaaaattgaaaatttcg actTCACTTCATAATAATAGGGCCCTGGTATACTGCCTAAGGAGGTGGTA CCATGGTTGGTCCAGACGGGCTAGAATTTTAGTCCTTCTAGAACGCCTAA AAAAGGTCTGTTTTAAGGTTATTAAACGAAATTTGGCCTCATTAGTATAT TTTGTTTAATTGCTCTGCAAAAATGTGGTCGGGTCACTCCAGTTAAGAAT GTCTGGAACTCTTATATTTTCCTATTTTCGGTTTTTAGCTCGGACATACC CTTATCTCGATAACCGAGTAACCTCTCCCGGGGTATAAGGGACTGTGGAT TCCAGTTTTGACAAAGCTAGAGTAGATTAGTTTTTCTGGATAACAGCGTA ATGTAAACCCTTTGTTTATGATCATTTACCTCGCCCTTTCACCTTTGcta aaaaaatactcaaaaaagccttgaaaaaaTGGTCTGTAAAAAATGAATCA AAGCAAATTCGAAGAAAGATAAcggtttttccaaatttccaaaaaaatac tttttcaaaatttgatgacgtcaacaaaaatcagaaattctaatttttac taaaaaaaatgctgacgtcgaaaattcgaaaaattgctTTTGTAAAACAT TACTTGCCTACCAAattagatcaaaatttgagaagtTATgagcatttcaa atttttcttaaaattttcagaaatatcTGAAAGAGAATGGCCTATTATTT TTAGAAAGATATTTAAACCTTTTCCGATGCAGGATAAGGTATGGGGGAGG GCGAGACAATCTTGTAAATGTGTTGTATTTCATGCTTTAAcagggaaaaa tgaaaaactttgaacaaaaagtaaagaaattgcccaaaactaagaaaaaa aatgactttttgagATTTCGATCGTTATTCGATCATATttggcgagacca atttaatttgttgttctacgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcttgaataaa gctgaaaattaattcaagaaattgaaaaatcataaaaagcattccataca ctaaaattttattatgatcttcatcgaagataaaaaaaaaagttaatttt tgatccagatactttttgggaaaattttctcggtaccttaccaaccctga taaatgaaaaaaaaattcttattttgccgaccgaccgacccatatttttc taacgatctgtccgtagaacaacaaattaaattggtctcgccttggTAAC CAGAAAAAACCGCCTCATAATTTACATTAGCATGACAGCTATATTTTGAG GCTGTAAGAAGCTATAACTAGCCCAGAATACTGTATTATAACGTCATTAA CATTACGTTATAAAGCTTAAAATTTGCATTGAACTGAAAAACTAATTGTG ATATCAAAGTTCACTtataatgatgacgtcagcatttttaaacaattttc gttTTCTGGTTAAAAAAGACGTTAGCTTTTTTTCAGCAGGCGCCGCGGCA GCGGGAGGGGGCCGGTCGGGCCTTGAcccgaccacattttttcaaagcaa aaagaaaatttactcaTCAAGCCAAATTCTGTTTAATAACCTTAAATCAG AACTGTTTTAGGCGGAATCTGGAAGggctaaaatctaaaaattttcaccc gtcggccccaactatggtggcgcctccttgtCAGTATATCGTGGCCCTAT CACTTTCGAAGTGGAGCCGCGGTCCGGCAGTTCAGGCACCTAAAAGAAAG TAGAAACTATAGGCTAATTAACGACTGTGAACAAGCTTCCAATTCCTAAA ACCGAAGATATTCTCATTTTTCGAGggcaaaaatgctgaaaaaatggaat cttgatttttttaactcCCTCTGCTTAATATGGAGAACCAAAACTGGtta ctttattttgaaaaagtgagtaACAACTTGTCGCCAAGTGTTCTTTGATA CATTATTTTTTGCACTGGCTAAACATAATTCGAGTGTTATCTTATGTGCT ATCTGAAAATGGGACATCTCAAGGCTATGAATCGCCCCAAAGCCCATTGG ATATTGTCCACCCAACACTACTTATGATAAAGGTAACCATTGAGATCACA CAACTCTCGCATAATACAAACTACCTGTATTTTAGAATGGTAAAATCAAA TTTCCCTATTacgaaatcatttttaaaacaaatagCAACAAAACTTCCCA CTCATAAAGCTAAAATCTTCCTGTCTCAGAATTAACATTTTTAACATTAT TCAGACTCTTACCTATCTCAAGTTACAGTCGTCACATAGTGAGAGAGAAA TCATAGAAGTGTTGGGCAATATTTATGCATACGTCAGCTATATTGTTTCA AATTGTCTCTAATTGCCTCCAAAAAGTGCTGTGATGATAAAAACAACAAC TTCCCGAGGAGGCGGGGGATTATTTTAGTCATTATTCATCCAGCTTCGTG TGCACAATTCCCTGAATTGCAAAATCTTCCTAACATGTCATTACCATGTG atttattagaattttttttttgtgcagtacagtattttttttaaagttaa aatattGTAGAAAGTGTCAAgtcattattttttcataaattacgtgtCAA ACACTTTTTGCCTCATTTTGAAACGATTTCTTTTTACATAATTATCTCTC TTATCTTTaaattttaggggatttttcaGGCTTGAAAAACTAGCTGTCAG TGTCTTGAAATTACTCCAATATAAGGCACGTCTCGTTCATAACATGTAAA GTTACAATTCATTGTCGATTGAAAGTATACGAGTATACTCCGAGGCTCCT CTTCGATAGCTAACTACCTGTCACCCGGTAGGGGAGGACAACAACAATTT CTCTCTGGATTACGCTACTTACCTTGGGTCCTTCCCTTTAATCTCCGATT GTCAAGTTGAGAGGCCTCAAATACCAATTTTGTACTAAGTACCAAGCCTT TTAGGGTGATTAGGTCGGGGATTGAGCCGACGAACTTGTGCAGCGATCCA AAAGATGACATTTATATATCTTCCGATGATCGTCAGAGGCAGAGAAATAA AAGGGCCCGAAAATTGTTGCAAGGTAAAGTTTTTGACCTTGAAAAGTCAC GAGAGCTTAATCTTTGAAACAGACCGTACATTACACGAGCGAAGATCTAG TCAGCACAAGGTCGCACTTGTGAGTTACTTTCAAAACTGTTTCAGTTTCC TTCCCTTCCCCAGTGTATTGAACGAGAGCGTCTTGAACGAACCAAATTCT ACATTTTTCAGACTTGTTATCTCACGTTTGTAGATTGCTATGGCAACCAA ATTAAAATGTCGAGATTTTACTTTTTGAACTATACATCCGAGATCAGGTT ACAAAGTTTGATATCAATTCTAGATAAGATAGTTGAGGTGatattttagt ttttaacaaCAATATGACTATTATGATGATTGGGTTTTGATCTGGTCCGT CTTAtacctaaattttatttttcttgatcaTCAATATGATCCTATAAAAA CATTGATAAAAAGGCTGTAAGCTTAAACGCTCTGTTAAAAGAGGAAATCA TATCCTTGCCAACATTTCATCAAGATTTCCCCGAAAAGGCGACCTTCTAA GAAAATAACttatttttgttgaaatctgcaaaattttacTGAGCTCAATA GTTGAGAGTTTCCGATACATAGTAGGTCAGAACACGAACTAGAAACGTAA AAATAAACGTCATGACGGATGACGTGATTTTGGGGCACAAAAAGGGTACA AAACCTTCAAAAATAACATATACTTGCTAAAATGTTTCACAAAGGTTGCA CGATGCATGATATAGTAAgcattttttaaagtaaattttatagcCTTTTT CTCTAGTATTAGATTTAATCAAAACTATCTCTTACTAAAGACTATGACGT CAGTGTACGTAGTAGGTATTAATGCCGATTTGCtattttcattcatttgt tAGCAAATGCTGATTCGGCAAATAATTGCATTGAGCGTGCCACTCTCTAA AAAGAAGGCTTTTTATCTACCAATCATAAGTTAAAACCCGTGAGAATTGG GAAATACCGCCGGCTTTAAGCAAGGCTATTACTTTAACAAAACATCTTCA AGCAATATTTCGCAATATTGACATGTTTGACAGGCATGTTTGAGAGAGAG AGGTTTTTTACGTGGCCGAAAGTAAAATGATTATTGATGCGTAGCAGTCC GATACAACATTATGAAGTAAGAGGACAACCCGGAGCAAAACGGAGAAAAG TGCTTATCTGTTAATTGTTGAAACGGGTAATTGTATTAAAAGATTCTCAG ACCCGGTGTACATTTTCTAAGCATTGAAACAATGGGAAAGTACCGTATGA TTGCTATTAATAAGATGGGGCAGATGGCAATTAGGGCAAGACCAAACTGT AGACTTGTAATTAACGAAGGTTAAAAGAAAGCAAGAAGCAAAgttcaaaa aaaatgaattatcttactatttttttgttttctcttgtaGTTGTCGATGG GTTGAGCATTGTCCGGTCAGGATCTAAAGATACAAAAGGTAACTCAAACG GTTGTGAATTATACAGGGCTTCCAATTCTTATTAGCTATTCAATGATCAC ATTgcaacatttgttttgatttggaatTAACATAAGTTACTGGTCCTCTC TCTTTTTAAAATAAACAgtatatcatattttcaagacaaGACTTGTCAAA ATAAATAAGAGTGTATTAAGAGTGTTGCTGATCCGTTGTTTAAGAAAGGT TTGTATAAATTAAAAACGGTTGCTGAAAATGTAAAATTGTTGTGCATGGA TAGTAGGTAATAATATTTTCATTATGTATTTTTAGATCTGACTGCATTGT TGAAAGTCCAGCGTGACAGGGACAACGTCACTTGTCAAAATTTGTACAAG GTCTACTGGCTAGTCAAGAAAGATCAGTTCAGTGTTGCATCACCCAAACA AAACATTAACTACGTCATTCAAGCCTGCAAACCAGATATCACAAACTTAT TCTGCGCGGATGAAAGTAACGATCAAATTTGGACAGCTGTCcgattttgt gacgtcattccGAATTCTGACTTCATTGTGTGTAAAATTTTTCCGAAAGG ATTCGAATCGTACAACCATTTCGCGAATTGGACGATGGAATCTTTTATCT ACAAAGTTCGCGGAGAGGATGCTGGGAAATCTGTACAAATGAATACAAAA AGTTTGGTCATCACACCTTTCTACAGATGTCCGAGAATCAAACTTGTCCG GCCAAGCCATCAATTATTCAACTAAAAGCGAACAGAATCTTACAGACGAT CAAAGGAGACTCCTGATCCTCAAAATTctttaaaagaataaattttAATC CCATATCGCAATTTTTTTCCACAGTCAAAACAAGATTGGGAGTTTTCCAT TATTGAAGGTCTGTAAGACGCATGAACTGGACCCGACTTAATGAATATGA AACAACCAAAAGATTCTTGACGATAAATCAAGAGcaacattttattttat attcgTATCATTACACTTAGTTTTTTAATCCTGCTAAGAGACCAACTTCA TTGTATCCCAAAAAAAAGGGCAAATTTTAAATGAAGTAAAATCCGCATAG TTTATGTAGaattttatgacttgtataactgatattgggctcttccagaa aaaatccgttcatggggggtggaggatgaattgtccaggggtatttaaaa aataccaaaaaaatgcaatgtccagggggtaattttttgtgtccacgggg ttgatttgatgtttgtccaggggtataacccgtgtccaaggggttaaaaa tcaaaatatccaggggtaattcatgaaaaaaataatatatcctccacccc ccatgaacggattttttctggaagagcccatttcaaGCTCAAAAACATTC AATCATTTTGGGACTATCTATTGATTAAACAGAGTAttgttattttattt caatcattCTAAGCCAAGTTCTCAGATAACgagttttgaagattttactt TATGTAAAAGtttgtccgctttttttgggacacactgtatctAACATCGT AGGCAGGAAAATGCTTAAGACCACTTATAACGAATTCTTTCTCAAAGTTT TCTCAAAGACAATTTAAATCAGCCTTGGATTGAGACAATCATGCATATCT TTTTTGCATTGCCTTTTCATAAGTTTATAGCTTTGAGGTATTTTATTGGG CTATTTcaattaaatattttatttgctGTTATATAACCTTAATatatatt tcattatttttaaacCGTATGTCAAcccaaaatttttataattattcTTT ACTTTAAGCACATGTATTTACTCATTTCAATAAATTATAACCGACTTTGC AATTTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054948TCONS_00054948Clytia hemisphaericatranscript
TCONS_00054949TCONS_00054949Clytia hemisphaericatranscript
TCONS_00054950TCONS_00054950Clytia hemisphaericatranscript
TCONS_00054951TCONS_00054951Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054949-proteinTCONS_00054949-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_247supercontigscaffold_247:240712..249568 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.62 0.16 0.32 0.97 3.37 3.44 25.25 24.91 28.12 39.97 13.7 12.58 3.8 3.4 0.66 0.96 4.13 1.33 2.86 2.33 1.78 1.55 2.21 2.21 1.75 1.93 8.77 6.76 12.85 8.87