XLOC_034180 (gene) - C. hemisphaerica

Overview
NameXLOC_034180
Unique NameXLOC_034180
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_242:139140..150792+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034180 ID=XLOC_034180|Name=XLOC_034180|organism=Clytia hemisphaerica|type=gene|length=11653bp|location=Sequence derived from alignment at scaffold_242:139140..150792+ (Clytia hemisphaerica)
CTTATATGGTTTTTAGGTTTTCTTTCTTAGTCATAATACAACAATGGTAA
AAATGGATGAAAAATTACTATTTTGCGTCAGTATCAACAGCCCTAAGAGA
CGTTTATATGGTCCCGAATGGAAAGAACTTGACGGTGGAAAAACTTTGAT
TGatctttttttacaagtttgtggTACAGACATTTTAGGACAACAAGTTC
AAGTTTTGGTTTCAAAAGAGAGAGCTTTCCTAGAAGCAGCAGTTGTCCAA
GTATATACACCGCTGACTGTGCTGGCAGAGAAAAGTCAAAGCTATATACA
GTTTATCCTAACAACTGATAATACTAAACTAGAGGTACATCTTACATTAA
CAAGAGAAATTCAACAATGGTTTAACCGTACTTAGATTCAGCCGTTTAGA
AATTTTAACCCTACTTTTCCTATTGTACCTGATTGTACATTTTACTGGAA
ACCACTTTTGCTACAAAAAtgttaatttgaaaattatttatcCAAACCTC
CTTAAAATAAAACTGCCTTTTTCTGTcattttgtattaaaaattgACTGC
TTTTCTCCCATTTTCTTAGGAACATTTTGGAAACAAAAAGTCAAGTTCAT
CATACGAGTAAGTTACTCCTATACTCTGCTATACTTATTccttacaaaat
ttctgaagattttcttctaatttttttatANTCTGCTATACTTATTcctt
acaaaatttctgaagattttcttctaatttttttataaacaagttTGTAC
CTATGCTACAACAGGCAAAAGTCATATTTTGTGTATGGTTGACATTACTA
TGTCAAGCTATAGCGATTTCTATGGTATGCTTTCCTAAATNAAACAAGTT
TGTACCTATGCTACAACAGGCAAAAGTCATATTTTGTGTATGGTTGACAT
TACTATGTCAAGCTATAGCGATTTCTATGGTATTCTTTCCTAAACGTATT
GAGTTATTGGCTGAACTTAACACCTTTCTTCCTTAGAAGTTCTCTTGGCC
GTCATGAAACGTTCAGCATCAAATCGAGTACCGGTTACCTTGGAAACGAC
AATAAAATCAACACGTCATACGTCAGTAGTGTCGGTGGAGGAACCAAACC
TTCGTTTGCTGATATGACTGTCGAAGAAATTTGTGATGAAATTAGAAGAA
TTAGAACTAAAGAGGTTTGTAAAGACTTGAAGGAATAGCCTGCTGATaaa
tgaaatttagcaaaatagCTGTATTCATTGTCCTTACCTGGCCTGTAAAA
ATTGCAGGCTTTCCTCAACGGACCATGAATGGAATGGGCtgctccattaa
atttccatgcAGGGGGGTTGACGAACCTTTTTAAGTCAAATAAATATTCG
TAGAAATATGTGGATactccctggaaaatggcaaaatttgcaaaataacc
ctttgaaaaatcttttacataccttaaaagtaagggtggatggactaaaa
tcagtctttgaaaaaatactccGTTATACCCCCTGAAAATTCTTCTccga
ttaccccctggaaatgttcgtccacccgttcgtgtatggatataaaatgg
aatggcccaatcttTGAACCTATTCCTGTTGTAGATATTCCTCAGTTTTG
TATTCAAGAACTCCGTTGTCTTCTACGGTCACCTATTTTATTCGATTTGC
TATTTTTCAAATTGGAAATCAAACTTGGAAGTTTAGTGAAGATCCTTCGA
AAAttaattcatattttttttttcattcttacTAGACATCTTTTTAATGT
TATGTTTTGAAAACAGAATGATATAGATATTTTGACCGTTTTATAATCTT
CCTGTTATTTTTGTGTCGACCAAATTGACCTTACCATATgccatcaaaat
aaaaacaagaatttTCGTCCAGTTTGATCGcggactttcaaaaaaaatta
ctgaattaaaaacattttattattGATTGAGTGCTGAAGAAGACCAATGA
AACTTTAGTAATAGATGAGAGCAATGGATGTTGAACAAAAAGagagcatt
ttcattttctttcctGTAAGATTTATCACTATACGTTGGTCTGTCTACAA
ATTTGcaccttattacatgaatattaccagtcattttattaaaaccagac
gtggtgtccttgaaaaagctaataaaattcgtgttaattttttggaccta
cctccgggtgccccggtggaggtcctataaattaacccatgtccgttcgt
tcgttcgttcgtccgtctgttaccagcttttctcagNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNctcaggattggctcattagttttttttgatttttggcacaatg
atgcaaaatggtaatgcccaaaatgtgacggagcccgattttcgaaaaaa
attcatttccgtctgaaaatgccggaaatatgccggaaaaacgttttttt
ggcattttctcaagatttcatcatgagttttttctgattttttgcaaaaa
gatgcgtattagcaatgtccaaaacttggccgagtccgatttttgagaaa
aaatcttttccggtcgaaaatgccggaaatatgccggaaatcgccatttt
tgcagattttcatcgaactttttccttatatttcgttgttttttcacaca
aaaacattattaatagcaatgccaaccatgaagcatggttcaatcgtcaa
tagaactgagttttgaagccggaactttctaaaaatcgccggagcagccc
attttcgccggaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttgataaca
atgctcaccatcaagcatgattcaattgtcaataaaactgatttttgcga
ccagaactttctatttattttttccttacaaccctttcctctcccccatc
aacaatcaatgtaTCGTctacaatcaatgatgaattttttgcgttatgca
ttttcgttaaacgctatattttctgactgatttttttcatttttctcctc
gcattgctatctaactttcatcatcaggtaggtccattcagcatctagct
tgttgcgtgttaatttcaaggtcgttgaatacttgcctagtaatattcgt
gtaataaggtagctCAAGTGTTCAGGTCACGTCCCAAATTGTGTTGAGCA
AGTATAGATGACATTTTTCtatttgaatatttctttttttagctATCAAA
GTCGACGATTGATTCACTTGATGATTCGAAATACAATGACTCCATTGACA
AGACGAAATGCGTGAGTCCTTTCGTTATTTGGTAACTTTCGACTTTTTGG
TGGCTTATTTTTAAAAGACGTTATTTGTTTTTGAGCTTATTCACATCGAG
CCATTTAATGCTCTTTGGGGACGaggtggagtttttacaagctcttattt
gatttggttggtcgttaaccagtataacaattttgttactttttctaaag
gacgcgtcatttttattacttcaaatgaccaattatcaaagtatcttata
gaaactccatctcatctggcgTTTTGAAACGCAATAATTATTTGAAGCTA
CCTATTCGATGTAACCTGAGCTTTAACGTGCGCAATTTCAATCTCCTTTT
TTCAGGATTCGGTAACGCCACCCATCATAAAACGCCCTTCAAGTGGAGCA
CAGCGTACGCCCGTCAAAACTCCACCTTCATTAAAAGCATCAATTGCTCC
TTCACCTACTAAAACTTCAAAACTGCGGACTGCAAGCAATGCTAAAATGG
GGCGTAATTATGAATCGACGCCTCAGACACCACCCAAACGGACACCTTCA
CCTGGACCAAAACGCAGTCCCTCTCCAAGTTTGAAACGATCACCATCACC
GAATCTCAAGAGAAGTCCCTCACCTTCTTTGAAGAGAAGTCCCTCGCCTG
TTCCTAGAAAGTCATCAGCCAAAACTACCTCTGAAACAACGTTGACGTCA
TCGACGACGACTACCACTCGGAAAAGTTCGTTGAAATCTTTATCGGTATC
ACCCACTACTTCGACGAAAAAAGCAACCGACAAACAACGATCCCCCGATC
TTGATCGTTTATCGGCTCTTGCCAAACCACGCCGGCGAAACAGTGAACCA
GCCAAAACAACACCTGTCAAAAAGTCGTGTAATCCGATTCGGAAAGCAAG
TATGAAATGCAAATCTCCCCGATTGTCAAACGTCAAAAGTCGGTTTGTGA
GACCGGATTCTGCTAAATCTGATAGCAGTAAACCAAAAGATTATTTCGTG
GAGTTTTTCACTCAAACTGCTGACGTGATACCACAAAACACTAAAGATAA
ATCTGTTCAAAATACTTCTAAAGTTGATGGAAAAGATTTACCAAATAACG
AATACGGTGTAGATTCACTCTCGGCGTGTCAAATCGAACCTTCGAACGAA
GTTTTAATGGTTTCTGATGTTTTGGCTGAGATCAGAGACTCGCAAAGTCC
AACTAAAGAATCAACACAAaaagaggaagaaaatttgaattcaaatgaaa
atattatagAAATGAAAACATCCGATAAATTGACAACTGAATCTGACATT
ATGGagataaaatttaatgatccTGTTGACGTACAGGAGGTCACACCTAC
TTCTGATACTACAGagataaaaccaaaaaatgaaTTCATAACAATGAACA
TTGATTCGAAATTAGCATCACCGAAAAAGTTGTTATCCTCACCACAACAT
AATAAATCACCATTGTTTTCACCATTATTGGAGAAAATCAAACAGTCTAA
TTCGAGCGCATCCAGTCTCGAAAAATCGACTTCAAAAAAGTACTTTGTAT
TTCCACCTGATggagaaaacaacaaaattgaCGTCACGAGATGTAGTAGT
GGTCAAACGATAAATATACAATCGAACGATTCTTCACTTAACTTATCTGA
AGACATCCCAATAGACTCTCTCTCCATTTCGACCAGTAGTAAAAATAACG
ATCTCTCGTCTGACCACGATACCAGTAAAGACACTTCAGAAGAAAAGACG
TGGGCAAACTCGCGAGGAATTAAGTTTAAAGGCTCAAATAAAGATACGAA
AAAACTGAACAATACTTTTACCATCCAAGGAGGGCTTTCGGAGAGTAACG
CGACAGgtataattttttgagtttgtgaGATGCAGTTTTCACTTGCTACC
TACGTCCGTAGCAGTTTTGTCCTATAATCTCGTACCCTGAGTCACTTGCA
ccgatttttgattttactgatggacttTGGCACAATTGTTACCATTTTAA
AAGCTAACTAAGGGATTTGTTGTCATTTCACAGCAGCTATCcgttaaaaa
aaaagagatttaaaaaaatcatttaatctaACTAGCGATTTCGTCATGAC
TTAGATACTAAGGTTTGATTTTCCAGATGAGAAGAAAAGTAAATCCAGTG
AAATGTCAAGTGAAGTAATCGACGAATCCTTAGAATGTGTCCCCATGGAA
ACCAATCCCAACATGCCACACGAACGTAAACATTGGACTAACAGTCTAAA
GGTATGCTTCCTTTTTGTGTGAGTATTTATAAATATCTTAGGGTTTTCTG
TCTGTCTTTCTCGTATTGTTCACGCATCAACAACTTAGCCAATACCTCAT
CTTTTGAATCGTCAGGTAATTTCATtcagttaagggctctgaccatagtg
aatttttaatatttgccacttacaaaatagaaagttctacttgatgtagc
ccacaaaactgtggcatgttatacattttctattaggccaattatccttg
agtctgaaaatttaagaatttcaatgaaaaaatttgatgaagaagaaaat
gaagactttcgcaaagaagagtatttcaactttgaagagcttattttctG
CTTAtttgcagtagatggtgtatcttttaccgaactaaaataaatttttc
ggaaaatttttctaaaaccttatttgcttcaaaatcttgaaaatagtact
ttttgaccaatttttcatagaaaaacagccataacttttgatgcatcaat
ttagaaaatttttccgaaaaaatttaaaacagttcaattctttgcggaaa
gtctgaaaaaacttcgaaacaaaaaggctaattacccattaaaacttagc
cctttttgtaaaagaagatgatgcaacatattattaacgtctttttaaag
ttcataacgtcatttttgcaattaaattcttaattactcttaagggattt
gattaaaaagcaattataAAGGCAAATCTTTGTTAAGAGTGTTAAATAAC
CTAAAGCATAAcatttatgttcaaatactaaaatcaatttggtCACAGCC
CTTAAATTCGAGTATTTAAAAGAAATGTTTAATATTTActcttcattttc
tttgtcttttcagGGTATGGATGATTTGGTGGTGGCATCATTGAAAGCTT
TCTCCATTGAATTGCGTTCCTCCAGTGAAAGTGTCGCTTCTAATATCAAG
TGAGTAGAAACGAATTCTCATTATTCTActgtaaaaagttcaaaaatctt
cataaaatcttcataaaatcttaataatcaaaatttttcaaaacattcga
ccaatagtaagtcgctATTAGCGCGTAatgtcctgattacccattatgct
ttgcgactgtgaaatggcctatgtgATAACTATTAAACAAAACTTAAACG
AAATAAGCAGCTTTCATTGTCAACAATGACAATGACTCGATAACTAAAGT
ATGTCTCAATGCAATCTGCAGAGGAGACAATAAAGGCTATAAGTTTGATa
taatttgaaactttttcagTTATAACCTtctaagattgaaaatttcctaA
ATTGAAAGCGAAGATCATAGGACAATTTTAcataacttgattttttattc
atctttttagttttattttctaaaatttttttatagtttttctACTTTAC
AATagtaaagttttcaaaatagcctttcttgacaaaaatgtgaGGGCCCC
GTGGCCCCCTGCCTGGTGACGGGGGCCATACTACTtactatcttttcaac
aaacgcataaccaccgtttcattcgaacaaaaattacagcctttttgtat
ccgctgcagaTTGCAAGTCTGGTAGGCGTTTTTTGAAAACGTGAAACACt
catttaataaaatctttcattttgaagGGTTTTATACGAAAGATGGCGCA
GTCTTCACGAAGGGGCTGATGATGAAGATGGAAAAGAAATGACACCTAAT
AACGTGTCTAGTGGAGCATTGAGTAAAATCACACCACGAGCCTCACCTCC
CAATGAAGACGTCGGTATACAACAGGTATAGaatcaacctcgttccctgc
gtattatcagcttttgatgcttactgatagatAACGCTAGATAATACGCa
ggcattggctggttttcgaacacgtatgattacgtaattcaaaaacaaaa
cgtcagatttcatttgttcctgggtttgaaaccattgcattgcagtgcaa
ctttgtaacgtcaattttttttatgNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNcccctctgagagggggaactcgcatcagccaacaccagggtattctct
ggcgtccataagtaacgtaaataaagcctgggatacacggggacgaggtt
ggtaTAGAATTATTTGCCAACCTCGTCcctgtgtatcccaggctttgtTT
ACGTTACTTATAGACGCCAGAGAATTATccagcgctatcagtaagcatca
aaaaagctgataatacagaTAATACACAGGAAACAAGGTTGATTGTTTGC
TTGACAAACTCCAACCAAAATCGTCTTTTTAATCTACTATTACCAAGCCT
TGGTCCGATTCTAATCTCCAGTCCTGAATATTACATACCTTACTATTTTC
TTAAATCGAGATCTCGTAAAatcatagcttcagccaggtttctagctccc
cccaacaaagtaaggccccccaacaatttagctccccccaaaaaattgcc
ttgtgctaggtcacctaacacttcaggtcccaagataaacaaaaacaaaa
acattgttctcccgcccccgtagagagaagtcaataaaaatatatgcgag
tgataaatgaaaactaaattttacttgttttaatatttatgtttacaagt
cgtttgctttttatatttgatttaatagtaagataatAATAAGATATCTT
TTGAATTTAGCTGAACAAcccccagagtctcagtcagatcatctaggctc
cccctccccccaacaatctaggtccccccaaatattttggtaattttagc
ccccaggctctttaaaggccaaaatatttcttagccccccccccccccca
acaatctaggtccccccaaatattttggaattttagcccccaggctcttt
aaaggccaaaatatttcttagcccccccccaaaaaaaaaaaataaggggg
gggggctgaacctatgaaaataaatacttttacgttgaaaaatgtatttc
tttttcttgctAAAAGTCTATATCTAAGGCCGCCAGGCCAAAGATCATGA
ATTATCAGATATTCGTGATGTTAGAGAGTTGGTATCAAATGTTCATTTTA
TATCCTCTTCTAGAACATTGCATTCATCTTCAGAAACTTACGTAAAATTG
AAGTCAAACTAAAAAGTAAGTCTCAGAATTAAATTTCTTACTTCAGTCTA
CGATTTTTTTATCCTCCAAATCGAATTTGTTCacaatacaaaatctttgt
taACCTGGAGCCTCCTTTAACATTTCTATAGTATTTTCTCAATCAAATAT
GTTTTACACAACCTTGCAACAAAATATCTTCTTCTCCACCCTCTGTAGCA
ATGGAACAAGCCACGCTGACAATGGTCCAATCATCTACAACAACTTCTCA
ACTCAACACTAAAGAACAGGTAACAAAGCCATGTGTGTTTTGCCGCAACC
CTTTTATTCTACTAGCCCAGACACAGTGCCATAGGAagcatttgattttt
ttttgggggggaggtgaaactttaacccttcccaggcaagagaaattgaa
gctacttatttcccatccaaaacgcgcatagaacgcgccttaatcatgac
gacggattgtatctagcggtccctttgttttggaggactacattttttga
aatctagcgatagattttagtttcaatctggtgtttgtgtaaaaactacg
cgcgggcgttctggatgggaaaaaagtggtttcatttcccatccaggagt
ctcgcctctagcccttgtatatttttggacctaccccggtggtgtggagg
tcctataaattcacctctgtccgttcgttcgttcgttcgttcgttagtta
ccaatttttttggactttgaaaaattggatcattaattttttcagatttt
ttgcatgaaagtactttaatgggataaactttcgcggggattaaatttcg
cggttggacctatccgcgaaattcaaaaatttcgcgtggacttaatttcg
cgggtggcactatttggtgacaatattttcacgattttgtgacttttact
gtcaaatcatgcatgttggttgtttagcgaaatccgcgaaatttaatccc
cgcgaaagtttatcccattaaagtagcNaaaaaatgggtttttttggact
ttgtgaaaaatcggATCATtaatcttttctgattttttgcatgaaagtag
ggtaccatcataggtaaaagatggctaaagcagattttcccaaaaaaaat
ttgttggctcaaaaaacgcatgtttatctataagaatcactattaataag
catacatcaatgttcttagtcaaattactcagttttttttgctcatgagg
gttTACTTTTGAGGTTTGTTTTggtgaaattttggtttctaaacgttttt
taataattttaatagatcgtcactatttgtgttctaaATGATTGTtaaac
ggtcatgctcacgtagatatcaattatatgtgttaaatgcataaccaggt
aggtccataaaagtatcacttgtttttaatgttttgaacAGTTGTCTTAA
AGAAATCATCTTTGAAAAGATATTGGGGGATGGTATATTATCTGGTGGAG
ATTACCAGTATGATCTCCATCTCAataacatgccttgaaaatagAATTTG
AGTCAAATTTTAGATCGAGTTTGGCAATTTTGTGACCCTTTAAGAGATTT
AATTGCCTAAATCTTGAACTAttattaattttgattgatttttacaaaat
ttaaaaagtcgtGTTCCTTGAGAGGGAAATTCTcgattttagtgatttta
aaacttaaaaaagcctaTGAATTTGTATCCCTTTGCGGGACTTTTGAAGT
ATGAAAAAGGGTACACTTATGGCATTTGCAATAATCGAAATAATGCAGCA
AGAATCTTCAATTGATGGTTTTACAatttattcttgatatgcataagtca
agaagacgtcatattttttaacggaagcacccaaaaaagccggtttttga
cctctgtgtttctatttttagtaacagagagaggtcaaatcccggctttt
ttagggtgtttccgctagaaaaatgacttacgcatatcaagaattttctC
ACATTTAGACATTATTGGTACCAGACGGAAATCGCAGACCTTCAATTCAT
CGCAGCAGTACGTTTCATTGATTATAAACTTACGTATTACATGTTGGCGA
GCa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054188TCONS_00054188Clytia hemisphaericatranscript
TCONS_00054189TCONS_00054189Clytia hemisphaericatranscript
TCONS_00054190TCONS_00054190Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054188-proteinTCONS_00054188-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:139140..150792 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.41	0.48	0.44	0.27	4.34	4.47	8.3	6.58	0.84	0.68	3.39	1.4	3.47	3.33	2.91	6	4.57	4.56	0.18	0.18	4.19	3.93	1.7	2.53	3.65	4.98	0.68	0.21	0.45	0.4