XLOC_033848 (gene) - C. hemisphaerica

Overview
NameXLOC_033848
Unique NameXLOC_033848
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_233:580385..585892-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033848 ID=XLOC_033848|Name=XLOC_033848|organism=Clytia hemisphaerica|type=gene|length=5508bp|location=Sequence derived from alignment at scaffold_233:580385..585892- (Clytia hemisphaerica)
GAAACAAAGTCCAGTTATCAGTCATAGGGTGAGTAAAACCAAGTATTTTT
TGTAAAACAAAACATAAAAGCTATTGAGATTTATTTGTACGAGGTATAAA
TGTAATTTGCTGTACAACCTCCGTTCGAAAAAGTTTCTTTTACACTTACA
CAGACGTCTGAACGCAAGAAAACTCTCGTTGCGGAGCGTTTTAACCCTAT
TCATATTATACTACCGTACTTACCTACCGGTTGCGCCACAAAAAAGTTTC
TCTCTTTGAAACCAAATTTCTCGAAATCTAAAAATTTTGAAAGAACCATT
CCTATTTCATTGGAAAGAAGAAAGATAGACTTAAATTTTGATGGGTCATT
TATTAAATTCGATTAATTAGATTAAAAGTTATGCTCAATTGAATAAAAAT
GTTACTTTCAGAAAGTGCTCGAAAACGTTAAAAATCGACCTATCAAATTT
TTACTTTAAATTTGGCAATCGCAATAGCCTTTACATGATTAACAGCATTT
TTCATTAACTAAACAGATACATTTTGAAACTGAAGGGTCGAAAGGGTTTA
AAATCATCATCAAAATTAATTTATTTTAGTTTTACCAAAATTTTCCTGAG
ATTTTTGGTTCTAGACTGGATAAAGTCTATGTAAGGGTGGATCTACACAC
CCCTGTCTCAGTAACCCGGTAGAGTTTAAAAGCTCACCGGGGTGGCTAAG
AAAATAACAGGATTTCACCGGGGCAGATTTTTGACTGAAAAAAGTCGCCG
GGTTGTAAAATTTGAGGTAAACTTTCACCGGGGTACAGTTTTTTTATATA
AAGACCAGTAAAATCTTTTGATGCTATGACTACTATTGTTATTTTAAGCA
TCAAATTGTTCTAATGCTTTTTATACTCCCTGATTGTAATACTAAACCTC
AATTTGGCTAAAATAGCCCCGGTCAAAAAAGGGAAATGCTTATCGCCCTG
TACCAAAAAATTGAAAAATTGAACCCGGATGTTTATTGGAGTTATTTTTT
TATCAACCTATTTCAATGCTTCCAGTGAGTCTACATTCTAAATACAAGGT
CAATCTGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNACGCTTTAAAGTCTAGTACATTGAATATGCGTAAAATATTCT
CATATAAACAATCTTAAATGTGTTCCTAGGGTTATGATGGAAAGCTCTTC
AAGTTTAAAAAGTAAATCGCAAAATTGCAACACAAATTTATTTTTCTTTG
TTAATTTCATTTCTTTATCACTTTATTAGTTTTCTTCTTATATTATTGTT
CTGTTTAAAATGTAAGAAGTTTAAGAAATATTTATTTATAAAGGATGATA
TTTGACCGGGCCTCAACTATAAATTTCTAAAATTTGACCGGGTTCAAATT
TTAGATTATTTTTTGACCGGGGTTACCAATTTTCCACCGGGGACAAAATT
TGGCCTGTTTTTAGGCATTTTTTTCACCGGGCTACTCACCGGGGTGGATC
TGACCGGGCCACTGACTCAGGGGTGTATCTACCTCGAAACCAATATTTGA
TGTATTTTTATGAATTCTACTAGACTTTTTGGCCTTTTTCGACGAATTTT
CTTCCTTTCATTGAAATTCAACCTTCCTTTAAATAACAAAAGGTCATTTA
GACAGCTAATTATCATTTTCAATGACTGAAACGAAAATACTGATATATCA
TGTAGTTATGCTTCTGAATAATTTGATAGGTAGATTTTTAACGTTTTTGA
GCACTTTCCGAAAGTAACTTTTTTATTCAATTGAGCATAACTTTTGATCT
AATGAATCGAATTCAATAAATGACCCATCGAAATTTAAGTTTATCTTTCT
TCTTTACAATAAAATAGGAATGGTTCTTTTAAAATTTTAGATTTCGAGAA
AATTAATTTTAAAGAGAGAAACTTTTTTGTGGCGCACCCGGTATAACAAT
CCAAAAGCTTCCTTAACAATCAAAAGCGCCAGAATCGCAAATATCTAGAT
ATTGCTGCGGTATAACCACTTTTTTGCAATTTTGGCGCTTTTAATTGTCG
AGCGAGCGGTTGGATTGTTAAGGGTAAATACGGTAGGCTTTTAAAACTTT
CAGAACTAGGGGATGGGCTTTTCCTGTACCATCCCTCAACTTTTGATCTA
GTTGGTCTTTTTCAATGAAATTTGGCACACAATATCCTTGTCATTTAAGG
TAACTTTACAACAAATTTTGTTTGATGACGTCACTCATCATACCCAAAGT
TAGCAAAAACTGAAATTTCCATTGCTCTTCTAATCAATTGTTCTTCTAAA
TAGCCATTGTATTCTAACAAAGGCCTTTGAAAAATGTGCTCTGACTTCAA
AATGCTTACTCTATCCTAAATATTCGATAAATTACGGTTTAAACGATATT
TTCAACATAAAAAATAAATTTATACTTGAAATGGGTCAATGTTTGTGACG
CCTTACTGTCAAATATGTCATCATCCTCAAAGGTGTGAAAATTTTCAGGT
GTCAAAAATTATTTTATTTTTAAGCTGAATTAAAGTTAGGAATTTACAGA
AAGTTTGAAAAATTTCAAAAGCTCTATTATTTCTGGAGCTATTTAACATT
AGTCTCACCACCGAACAGAAAAAGCCCCCCCCCCAAGTATTAATAGGATT
AATGCTTCCAAGAGTCTTCGTCAAACAAGAGTATGTTCTCGCGACTTTTT
TTGCAACCAAGATCTTATTAGTGTACATATTTAGAGTTATACTTAAAGTA
TTCAGAGCCTTGACTATGTAATATTGAACGCAACATTACATTATACCGAA
GGTTAACACCACTACAAAACTATCGGCAAATCACTAAACTCATTTATTGT
CTCCTTTTCTTCTGATTTCAGGAAGTCAATCCAAAGAAGAACACCAAGAT
GCATATTATGTGGCTTCTTGTCCACCCCTTACTCATTCTAAACCTACTCA
AAGGATCTTTTGGTAAGAGCCTCGACCTCATTGGTAAACACAAGAAGACC
ACTCTAATACCATACCATACCATACAAACACCAAAGCTTCAACAATGCTT
CTCGATATGCCATTATAGTAAGAAATGTCGTGTAATGGAAACGACCCAAA
CAAATTCATTCAATTGTAAATTCTTCGATGTTACATTGCAAGCCTCAGAT
ATTACTGGCCCGGATCTTAACACAAATATTTATGCTGAAACACGCAACTG
TCAAGATTTGTACAATATCGGAGTACGGGCATCAGGAGATTACCACCTCA
ATCTTTTTGGTGATGGATACGAATATCTATTGTTTTGTCATTTTGATGCA
GATGGAGGATGGATCGTTATACAAAGACACATTGATAATGAATTCTCTTT
TCATCGCCAATGGGACGTATACAAAGAAGGATTTGGTGACTCTAAAGGTA
CTCTTTCTTTTCTAGTTCACTTCAACCTAGATAAGGTTGTATTGCATAAT
GTTGTGATCTCTCTCGTGATACGCAAATTAAAATTACACTTTCTTTTATA
AGGACAAGAAAATTTTTGTTAAGGTTTTGGCAATTTTAACTCAAATAGTT
CCTGCTATCCTGTCCTCGCTTTTAGGGAAAAGTTGGAGTATTTCTAGAGA
TAACAACCAACTTCACCCTTCCTTAGTTAATAATTTGCATAAAATTCCGC
ACAGGCTTATTCTTAAATTGTACTTATTTTTTGACGTTTGAGTGTAAGAT
GGAACAAGATAATTATATCTAAACTTACTTTCTTATTCATATAGGAAGTT
TCTGGTTGGGTTTAGAACTAATCCATAAAATCACCCGAGATCAATCTCAA
CAAGTCAAGATTGAAGCATTATCTTTTAGTGGCGATTCTGCTATGGCGAA
GTATGGTGCATTTTCAGTCGCAAGCGAAGATAAAAACTATCTTTTATCTG
TTGATGGTTTCGATGCAATCGCAAGTAACAATATGGATATTTTAAAATAT
TCCATTGGAATGGAATTCAGCACCTTGGAAAGAGATAACGATAATTATGA
ACATAATTGTGCAAATGGTTGGAATAGTAGAGGTGGCTGGTGGTACGATA
CATGTGGGGATTTCATGCCAAATGCTCAGTGGTATCCAGAAGAACAAGCA
TACAAACCGGTTGGCGATGGATGGAAGGGTATGAGGTATGGACCCATTAC
TGAATCGTGGACTTTGAAATCAACACTGATATTGATCAAACCAAAAGACA
ATTAATCGAACTGTATTGTTCAAATTCATGAAATGAATTCTCTGTTCAAA
AAAAGATGCAGCGTGCCTTTTGCCGAAAAAGATAAGCGAAAGAGACTTGG
CTCTTTTCAATTGACGGCAGATTTTGGTGTCAGTACTGTGGTAGTTGTAC
TTTGGCCAAAATCTTGACTTTAAAATTATTTAATACTGATAAAAAATCTG
GAAGAAAATATTTACAGCAGACATACACCAAGGGCATGTGTGTTAGCGAA
ACTTTGCTTGGTAATTAAACAGGATCTGCTTGGATATTATGTAAAATGCA
ATAATTTAACGTATTGTGAAATGTTATTTATGTATTTCAACGTCATCAAA
TAGGGCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053667TCONS_00053667Clytia hemisphaericatranscript
TCONS_00053666TCONS_00053666Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053667-proteinTCONS_00053667-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:580385..585892 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.36	1.4	1.98	1.49	0.17	0.1	1.22	1.25	5.21	3.35	3.66	4.65	8.4	7.8	0.35	0.32	1.84	2.36	13.5	13.59	6.33	4.72	2.46	4.31	2.18	2.85	1.68	2.37	0	0.04