XLOC_033844 (gene) - C. hemisphaerica

Overview
NameXLOC_033844
Unique NameXLOC_033844
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_233:437885..443429-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033844 ID=XLOC_033844|Name=XLOC_033844|organism=Clytia hemisphaerica|type=gene|length=5545bp|location=Sequence derived from alignment at scaffold_233:437885..443429- (Clytia hemisphaerica)
TTAGATTATTACAGAAAGATAAATATTACACAAAAAAATGATGATAGTTT ATTTACCTATGCAAACATAAACAAACATGGATAACTTCCTTCTTAATGTA CAAAATCATATAAAAATCAAACTTTGTGATGGGGCTGAGAGATGAAGATT GATAACTGAGAGTTATCAAGCTATGTTATTAGCGACAAGAAACTTTCTAG ACAGAAGTGTTCTGGTAATATTGAATCATAATGGTCGTAGTTGTGTCAAC CCCGAATGGTAACCACTCACCTTTACCGCAAAATGAAGACCTGGACCCTG TAAATGGACCCATAACAATGGCCTCGCCGACTGAGGAGCCGCTGTTAGAT GAAGATGAAGAATACTATAATGGGTCAATGTCAAAGAGGAAAAGTTTGAT GAATGATAAAATTGCATTTTCCATTCGAGTACAGGAACAGTTGAGAAGAA TGGATTTTTCCATGTTGAATATTCCGATTTGGGACCATGAAGAGTTTGAT ACTGGCTATTTAGCTGAAGGTTTCTTTGGCACTACTTATAAGGTACATAC TTTTTATATTGGAAGTTCATCCTGGCTTGGATAACAAGATTTACCTTTGG CCACGTTTCGAGAGATTCATCAGGCATACCTACTTTTTGTTTTGTTTTAT TCTTTTCAACTTTCCAAAAACAGAACAGATTCGCGCATTATTATGTTTCC AACTAAAACATATAGTTTTTAGTTTGTAGTTTGTAGCCGATTAATATTCA TCAAAATTGGAGTGTCATACAAGACAAGGTGTTCTATATAGACGAGGATG AAAGTTCTCAAAAAGACAAATATTCACTCTCTGTACTGTCGCCGATACGC CGAGACTCTGCTGTGCCGTGAGCACAGGATCTACGGTATCCCGCCAGCGC TATGATTTCGCTGGACAGGGACCATGTCGTCCGCATCGGTTGGATCATCC ATCCTCCATTCAGTAAGCTTACAATGATCTATATAAATGTCGTTCATAAT CCAAATCTTTTCCCATTCCTTCCCAGGCCACTCACAAACCAACAAAAGAG GTGCTGGTGCTGAAAGAACTTAAAGATTACGAAGATTCTGAAAGCATCAG TCAATTCCTTGAAGAGATTCGACTTTGTTGTCGTTTGCTTCATCCAAATG TTATCAAGTAAGGCTATGCTTCTTGCTACAGAAACATAAAAAAAAGTTGC CATTTTGAATGTTACATTGATGGCCGATAAAACCACCTCCTTTTCACAGA CCTGGTAGGATGCCCTACCACCGGAAAATTTGAACAACATATTGTCCCTA GTTTAAGATTTTACTTCAATATTTTGAACTAAAGAACTAAATAACTTCAT TCATCATTTGAAATAAAATTCATGGTAGTAAAATTGCTACTTTGTTTTAT ATTCCTGACTGATAACTTAATTCATTTTTTCTCCTTTAATTCAGGACAAA AGGAATTACTTTCAATAATGAGGGTCGTGTGTGCTGCCTTCTCGAGGTAT ATTTTGTTTTAGTTTTCTGTGAATTTTAACACCAATAGGATTTCATTTTA GACAGAGATTTCAAATTTTCTTAGCAATGTAATAATACCAGCACACATTC AAGTTTTGAGAGTTGGAAAATTTGAAATACTGGTGAGTCAAATTTCGTCC CCTTGCTAACCGTAAAACAAATGTAGAGCGTTTGGCTACGGTACGCAAAG CCGTGGGTTCGATCTCTACCCGGGTCAGACCAAAGACTTCGTACTTATTA CAAAAATAGTATTTGCTGCTCACTGCTTCTCGCACTCAGCAATTAAGAGA AGGATCAAGGGTAAGTGGAGCAATCCAGGGAGAAAGAATGACGCCCCTTC CCATTCTACGGGTAGATAGCTATCGGAAACTGCGGTCGCAGACTTGCCTA CTTACTTACTAACATATAAGACATTTATACGGTATGGATTTTATCTAAGT TTCCCCTTCAATTATTATTACAGTGGAGTCTCTTTAATTTGAATGTCTCC TTACTTTTAACTCAAACAAGTTTTTTTGTCCCTTCAGTTAAAGTATTTAA ACCTTACTCCATAACTCGAAATCTCCTTAACTGGAACAATGTGTTTAATC CCCGTGCGTGTTGGAGGTTCAACTGTATTTTTCTTTTTGATTCACAGTAC ATTGACGGTCGTTCACTACTCGATTTGGTTGATTCATTGCGCTTAGTACA TGCGAACATGGATGTGTGGTTAGCCTACCTTGATTTAACTTTGGATATAG CACGTGGAATGAATTATCTTCACAACAACGGTGTCATACACAGGGATCTG AATTCTAATGTAAGAATCCTTTTAATCCTTTTAAATTGACTTTTCACTCC TACATTTCGATTTCTAGACATAGCTTGTAATCTATGGAAGTTTCAAAGTT GATGTAAAGTATTCTAGGCTAAACCTTACTCTTAACTTATTGTCAATTTT GCACAACACAATAGTGCGCCGAAGCTACAGAAATGTGAGCTCTACATTTA ATGTCGATTTTTTTTCAACGAACTAACTTTATTTAACTTGTATACTTGTA AGGTTTGACAAAATCTGTCATTTAGATGATTTTTGGACAATTGTTTTTGC TGAGAAATAAGTTTTTATTTTCCAGTTAACGCACCTATTCCACAAACACG ATGCGATTCTCACACTGGGAAATTATTTCGTCCCCGATGGTTCAGCCCCA TGCAAAGTTGACTTTGTTTTTATCCCCATTGGTATTCCGATGGAATTTTT ATACCCACTGGGGGGGAGAATTTCCACTGCGGCTGTGAGACAGGGGTGTA AATTAGTCGTGTTGAATTCTGTTCTTTGAGACAGGGTTATGATTACTCAA ACTAACTCTATTTAGAATGTTTTGTGTCGAGAGATACGAAAGAATCGATA CGAAGCGATTATTATCGATTTTGGGTTATCGTATGAAAAACACGATTGGA GTGATCTAAGGTAAGTCTCTTTTGAAAAGTAGAGTAGGCTTCTAGTCTAT CGCTATTTCACGATATAAGTTCAAGCTTCATGGTCAATAGATAAATATTT AAAAAGAAATATCGAGTTCACCCAAAAAATCACGGTGATGTTTCGAAATC TCAAAATATGACAGTCAATTGGATTCTTTAACTCTTTCGAAACCCTCCTG GCCTTTAGATGGAGGGGTACCCTCATCAGTCTATCAAGTTTTTTTATATA GACCGGCCTGCCTTATAGATAAAGAGAAATCTTAGACCTTTGATTGCTAT AGAAATCTTAACTTGATCCTCTATAAACAACACGAACAAGCCATCCATCT CTATTTTCATAACTCTAACTTTACAAAACTTACATAACTCGAAGCTTAAT AACTCGAAATCTCACTTTCTTCCCCTTAGTGAAGAGGGACCAAGTGGTTG CGTTGGTTCGGTTTATCACATCGCTCCTGAACTCTTCGATGACCAGAATT GCAGTACTAAGGTAATAATTTATACGGTACAAAGCTCTTTCGTCTCAACG AGGTTACAAAAAGTGGCTTTTCCGTCAGCAAATTCAACAAAATTCCGCAA AATATGTAGAATCTTGCTTTTCTAATCAATTATGATGACAAAAGTTAAAT AAAAGATCACAGAACTAAAACAAACAAAAAATTTTAACAAGGAAAATTTT TAACTTGAAAGTACCTTTAAATTTACTATTGTTGACAAAAATTGGCGTGT TCAGGGCCATTTTAAACTGAAATTTGGCTGATTCGCGAAATCAAATTCGC GCTAAATCTTTGAAAAACGCTAATTCGCGAAAACAAATTAAAAAAATTTC GCGATTTTTTTTGGCTTACGAAATTTTAGTCTCGCAAAAATTAATCTGAT TAAAGTAGTTATTGATCCTTATCTTTTTATTTTGTTTAGAGTGATGTCTT TTCATTCGGCATTTTGATTTGCGAAATGATTTCCGGAATTCCTGGAGCCG ATCCAGACGAACTGCCTAGAACTACGGTAAGTATTTACTTGTGTTGAATT CAATTTGTACATATGTTTGGGTGGGTCGACGATAGCAAAGCGCTAGGTTA TCGAGACCCCCTTATAATTCGTAGCTTTGTGAAACGGAAAGTCAGTCATA AATAGGACGCCAAAGAACACAGAACAAGTGGCACATTTTTTACACTTTTT ATTTTACCTCGAATTAGACTCATAACTAAATCCATCATGGGCGAGCAGGA ACTTTAGCGAAGAGGAACTTCCGTGATTTTCATGATTTTTGGGCTCTTTC GTGAAAGGAATGTCGTAATATTCACTATTTCTATGCCTCGCGAATGTTTG TAAGACTAAAGTAATTTCTGACTGTTGTTAATTTACCGATGCTTAACTTT TAATAATCTATGCACCGTTGGAAAGATAATTGTGAGCAATGTAATTTACA AAACAAAATTTAGATTTTAATAACGAATATCAGAAATAAAAAAGTGATGA ATTGAATCGAATTACTAACTTTTTACCACCTGGAAAAAAAAGTAAATTCT CCTTAGACCCCCTGAAAATTTTTCTCGGACTACCCCTTGGAAAGGTTTGC CCATCCCCCTATATGGATATAATAGAATGCAATCATCATTTGATATCTTT TAACAGGACTTTGGTTTGGACGAAAAACAGCTGACAGAACTTGTTCATGA CTGTCCGGCAGAATTCTTGAACCTCGCTGTCCGGTGTTGTCAGGTATATA AAACGTATATATTTTTTTATATTTAATGTTTTTTAGTTCAGTGTCTGAAT TCAATTCCAAAGATAGAAAAATCTCTTATAAGAACCGAACCTTTGGCTAG AGCAAATACTGGCGCGAGATGTGACGGTCTTTTATATATCACTTCGTCCT AAGAGCTGTTTCTATTCGAAATTTAGCTTGAGTTTGCTTAGACTCCTAGA ATTCTATAACAGATTTTGCTCCCAATATTTTCTGCGGTCTGTTATTTAGA CTAGCGTTTTCTTGGTGACTTTCAAAACTCGCCCGACGAGATAGGCGTGT TTAAAGCGCCCCGAAGTCTTGTCTACAAAACCGCAGGTAGTATAGGGAGC GCGAATCCGTTAGGGGATGCTAGCAGCCTACTCAGAATTAATTGTAATTT TATGTTGTTTCAGACAAATCCGAAACACCGTCCACAATTCAGTGACATCA TTAAACTTGTCGATTTCATTATCGATTCATTATACGATTCCGATACGAAT GAACCAAAAGAAAACGAAAACGAAAGTGTAACCATAACAACGACCTTGAC GTCATTAGAAGATGATAATAATTCGAACCAAGTTGTCAATGAATCTAATA AGGAGACACATGACGAATACATTTTAGATTCGAATCTGTTATGTTCGTGT GCCGGCAAAAATTCGAAAGCTCTTTTACAAGAAGATTCTACTGGAGAACA ATTTGCGCTAAAAACGAGCTACGATCGTCATGGTGAAATACAGCGAACTA GTTCAAGACGTGTTACACGAAAATTTTTCAAACGTTGTTCTTTCTGTGCT GGTCGTATTTTTGATACTGATAAAACTCTTTATACAAAGCCAGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053660TCONS_00053660Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053660-proteinTCONS_00053660-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:437885..443429 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.95 4.78 2.67 1.56 16.5 12.21 12.49 13.88 10.21 12.75 9.35 7.25 10.59 10.48 8.92 11.9 8.33 9.53 9.63 14.07 8.78 8.52 8.49 10.3 9.23 8.84 3.23 2.2 9.3 8.76