XLOC_033636 (gene) - C. hemisphaerica

Overview
NameXLOC_033636
Unique NameXLOC_033636
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_228:280154..290849+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033636 ID=XLOC_033636|Name=XLOC_033636|organism=Clytia hemisphaerica|type=gene|length=10696bp|location=Sequence derived from alignment at scaffold_228:280154..290849+ (Clytia hemisphaerica)
ggaatgaaataaaaattgaataatacGAACGGAGTTTCCGCGGAAAACCA
AAGACACAAAATCATTTCGGGAATTTTGTCCCATTATGCAAAAGCAGCCA
GCGAGACgaccttttttccgatgtgttctgagaccatatttcagctagaa
attttgatctgttctgaccagatcttcgaaaattaatcagctacaAATGA
TGATGTGTTCTGGTGAGACAGtggtataatcaaggtcatctaCTGTGTTT
TTGTTGTCTAGGTAgccctagaaagcttcagaacataTCTTCTTTTAAGT
AGACACGTATAATCCCcgtataatcaagagaaaatttatgtaatcttgtt
gcctagtaaatTTTCataacacatctttcgtggagcaaaacaaatatatt
acaagtttatcttggcaaactgtttttcctagattttagagcacatcaaa
ccataaagtaatgataagtttagggagacaaatagggcgatagaaatcag
aacacataaTTTGTATGGAAAATTTAATGGTTAATggtcataacatttgg
tctcttaagataagaacacatatttctaaaaaatctcggCTGCTTTTGCA
TTATATGTTCGTCAAAAAAATGATAGGTTTTCAATCATTCAACGACCGTT
TTCGAAACCCTTAGTACGATATGTTCACAACCTAGTCAAATATTAAATAT
CCCTTCAGCTTTTTTTTATATTCCGATCCGTAAAATACACACCTTTAAAA
AGTTCAGCTAGAGTACAGCGAAATTGAACCTTTATCGACAAACGAACAAG
TGCAAAATTATAGTACGGTAGAGACTTTAACTCTAATTTCTcgttaactc
gaacaagtttacTCGTCGCTTCAAATAACAATTTGCCTTAAATCttattc
cataactcgaaaattccttaactcgaacaaatttgtgttcctcgcGCAGA
TTCGAGTTCTAGACGCTCGACGGTTTAACAAACGAAGTGCTAAATTATGA
TATTATGGTTTTCTTAGAAAGACGTACAATTTTTGATTATCGATAAACAG
ACAGTGAaagctcaaaaatttaaaagattttccatACTTGTATGCCAAAA
TGTTTTTGCCAGATACGAAGGCAATTTGTAGACACACACGTAAAGTACCT
CTTATAAAGAAGAAAAGGTGGCCCCTAATGGAGAATGACAAGCAACCCTA
TAATTTTTTGacgcaaaaatattttcctttgaagTCAGTACTGTCACGCT
ATCGTGAAAATTCTCTGATCAAAATCTACAGGAAATTCACGATATTCATA
TAGCTTATCGTTGCAACACACGGTGTCTTCCATGGGTTTCCGAGGTAAAC
TTTGACTCCATAAAATTGTCGTGCTTTTAGATTATCCACAGCGTGAACCT
TTTCTCCATTTATTTCAATCGAATACTCGTAAACACCTCCGTTTTTATAT
CTTTGGCTGATCTTTATATGGTACTGGTTATTGAACTCGATAAGACGATT
GAAGCTATGATCGAAATCATTCCCTACAGATGAAAAAAGCCATATTTTCC
CATCAACCTTATAATGATATATTGCCGGTGTACGATCGCCATGAGAGCCT
AGTTCATCGCCTTTTGTCATATGGAATACTGAACACCAATCCCCTCCTGG
TATTCCAGTGTTTACATGATTTGCATTCATTGTCAGGTTCAATTCGACCT
CCCATTCCGGTGATAAAATGGGTAATGTctttttgagattattttgTTGA
ACAGCTTCAGCTAAAAtagattagattttttttttacgcTCTAGATTGAT
TCATTTGAAATTGGAGTATTGAAATGACTGAaatgtctgaaaattttgca
atagacgatatcggctatatataaaaactcagatttgacctccgagaatt
ccccacaatgctttgtgcggaaaaaatttcacGAATGGACTTTATAAGTT
TACGCTCGACCAGCAAGGATTTGTGATTCTTTTTATGTTACCTTTGTTGG
TGATGACTATTGGTTGAATTCCATGTCTGTTCTCGGGAACCtgtatttaa
aaagaaaataaagataagATTTTCTTTAACTTCTTTAATAcccgaaaaat
caaaaaacaatttttttgaaatcgcaAACTTTGAAGTGAATTGTCTTGGC
TTTGACGAAAGTAATTTAGTTCATTTTCCGGTTCGTTAGAAAACTCGTTT
CAAAAGCTATCTCTTCAGCATGCCACTTTTTTGAATAAGGTCCTCAAATA
AATCTACGGCGACTAAAAAATGTATTTCAAGGCATAAAATTAGCTGGTGC
GGTATGGAAAGAGTTATCACTGGCAATCATTTTCTCTAATCCTGGAATAA
AACTTGACGGATTTTGCGGATTTGAATTCTTACGCGAAATTATTGTCAat
atggaaatttggaaaggtctTCCCAACTgacacaaaacgttgtttcaacg
ttcatgtaaggttaaatggacgttgtgaacattaaattgacgttgaaaca
acgttgtgtggcaGCTGGGTTATctgcgaaatatttttaaaaacaaaact
caaaaatgtcGAATAAATGAAAGAAGAAGCATTAttaatgcgtatttcaa
cacAACCATTATGTATGATTTGGCTGGGAAAGGCACAacatcgtgaaaat
attgtctcacAATAGTGCCTTATGTGTGCCagccagatggtgaaattttc
atccgacacgctaaagctctgaaggtttTTGTTCTAATAAAGAAAGCAAA
TCCTGTGCCGTTTGAAAAACATTCTGAAAATTATATGATACAAACCTGTC
TTTTACATCTCTGTGTAACTGTGGATgaaattccaaataaaaaacaaaat
gctaCCAAAAAATGCATTGCTGAAAACGTAGTTTAATGTCTAAGCGTTTA
ACTTAGGGCGCTTGAACGATGATATTGTTTATGTTACTATGCTacttttt
ttctcccttttttttagttcaaaatatttaatgaTTTATTTTGAACTAAC
NGGTATTTTAATGTCTAAGCGTTTAACTTAGGGCGCTTGAACGATGATAT
TGTTTATGTTACTATGCTactttttttctcccttttttttagttcaaaat
ttttaatgatttattttgaactaaccgaaattgttaataatttataataa
tttattttgaaCTAACCGAAATTGAATTCACTAAgaattttaatttattc
attCCTAAATTTATGTTTGACGGAATTTTCCTTAATTATTCATATGTTTT
AATTGAAGAACTAAGCAAAGGCGCCTGAAGCATAATTCagcttttataaa
taaaatagaatCGGCAAAGCTGGCATTTTAGCAtactttttgcaaatatt
tggTGAAATTtccgacttcaagtcgtcttgtttaagGAGAGGATTTACTT
GCATGACATTTACTGACATTTCTATTCACTTTTTATCAAAGTAAACAAGC
NTAAAAGCCGGCATTTCAGCATacttttttgcaaatatttgttgaaattt
ccgacttcaagtcgtcttgtttcctttttttgtacattaaagggacataa
cagtacttgcgaaatatgtaaacaaactgtatgcagcggatacaaaatca
aaacaaatgtcacatgtcaaaataaaaaatcaaactaaatatggctaatt
ttgattggtcaattgttttacaagtttgttttggacacgtgattttaatt
gttctcttttatgacacgtggttcgcgcaatgtttacattttactacttt
tactGACATTTCTATTCACTTTTTATCAAagtaaacaagacgacttaaag
tcgaaaatttcgcataatacttgaacatcaacgacgaagacgcgtgaaac
gtgactcctgcagcattatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATAAgagattaa
acaaaataaaatcaccaatttttcgaattttgtttgtaattctcttcttc
attcttctgttattttctgaagtttggGAAATTATGAtactaaaaatttc
tttggctgagcctcaaggtatgcttagcatatgcttaatttttctggaaa
tttgagcttcagtatgcttataaacgttatgcttataaaaaaagctccag
cttctggactagaaaattgcagggtaaaaactagccaactttaagcttta
aagaaataatactccttgatgagattaaactttgactcctttataactgc
tttaaactgcatcccattaaacaaaccctccccaatctcttgccgaTTAT
CCCATGAAAaatatataggggaaagattccagaaaagtaagcaagaatct
tagtgcggaaatgggaatctaaTACAGACAATGTACCAtggttcaaaatg
aaaatcctaattagcaaaaggtgtGTCAAGATcagtgaagtttgattgaa
gctcgattagtttgatttattaccttgttgcccattctttttacattccg
aaGGCTTATTAGCaaacgcccacgctaaagcttaaagagtgagccaatat
ctatcatcccatcggggaggaaaagctggaacttttactaaccaaactca
tcgaacaccaatcaaacttcatcggataaaaaactgtcaNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNccaaacgcccacgccataatttgcgccctaaaaaatgtctcgccagc
cagacacacggaaggctatcgtaatactttcgctaagcgaaattaacaaG
CTGAAACttctatagaaaaaaaattacaaatcctCTACCACTTGACAGCC
GTTGTCGGAATTCCTGACAATACTATTTCATAATTAAAAAAcccttgttg
atattttttgatacAGTTTTCCAAAGAGTTCTTGAGAGAAAATTTACTTT
AATTCCCCATCAATTGACAGCGGTTATCGAAATCCTAGCTACGTTATACC
CTGATATTGTCTGGTTTTCAAATGCGAAAggttacgtaattcaaaaacaa
aacgtcagattttaTTCGTTCTTCTATTTTGTAGTCATTGCGCTGCAGCT
GTCAGCCTGGCTTAGGGTGTTCCCTGGCGTCTACCAGTTACGTagataaa
gcctggaatacacggggcgAGGTTGGTGTGACCATCAATGATGTTTTCTA
AGGCTTCCCTAAAATCAGACAAATTTAACGATATAATggacaaaagaaat
taaaaaatatccatcataagctttttttctaagaataaactttataagat
attgtccatgatgaaaatgccCAAAAATTAAGGATATCGTAAGAATATTG
CTATCATGGAATTAGGCAACTGAAGCTAAGATATTTAGATTAGATTAGAT
TATTTTACCTTGCCTTTTACCTGTATATTGCCATTTACTCCCAAGCAATg
ctactctcgggtgcctaataaacgtacagaccaaaatTTAAACGTACAGG
GGGGAgataaaattggaattaatacagtaaacgtacaggctgaaataaag
GAACGGGCGAGAAATCAGAgttaaaataaacgtacagggaaaaatttacc
aatttttcaaaagtagaacaTCCAGGTCAAAAAGACTGACTTAAGTATAG
GTATATCTCTTATCGATCATTGACAagtacttaagggctctgaccatagt
cggaaaattgattttagtatctgaacataaaagttatgtttagatgcttt
aacacttttaacaaagaatcgCTTTTATAAATTGCCtcttaatcaaatcc
cttaagagtaattaagaacttaattgcaaaaatgacgttatgaactttaa
aaagacattAATaatattggtcaaaaagcactattttcaagattttgaag
caaataagcttttagaaaaattttccagaaatttataattttagttcgat
aaaaaatagaccatctaccgcaaaaatcttttcaaaatgttttttcttcg
cccaaactaagctcttcaaagttgaaatactcttcttcgcaaaagcttca
ttttcttcttcattaatttttttcattgcgatttttaaattttcagactc
acgggtagttggcctaacagaaaatgtataatataTCAAAGTTTTGTCCG
CTACATCAGGAAGAAATTCATATTTTGCAAGTGGCAagtattaaaaattc
actatggtcagagcccttaaataatCTTTTATTACTGTAAGTAACGAATG
AATTAATTGAGTCAATACTTTATATCAGTTTTTAGAAGACCACATAATTT
TTTCCAGTATGAATCGGGCGATATTGTGTCAAGATAAATAAACGTACACG
AGGGAATAAACGTACAAGcgggaataaacgtacaggcgggaaaattcttc
aaaagaaataaacgtacaggcccTAATAAGTTGCGTACAGGTGGGAAATT
tgacacgaaaaaaataaacgtttattaggcacccgagagtaagaAGTTCT
AAGAAGTTCCCAAATTCTTCCTTGAGGCATATATTGCATGCTAGATTTAG
GTTATGTTTTCATCTTAATCTAAGAATACTTTAagagtatttcaggatga
tttcgACCAAttagttaagaatatccatgattaATTGAAtatacaccatt
cttataaaaaaaacgtgtgtaCCCCAAGATTAAATGCCACCCTTATACTT
ATACcttatcaaattttaaaaacttttagatttcttAACGTTTTATAGAA
TCTCAAGGGATAGCgatacaaaaatataaatttagaGCAATGAACAACAT
GCGATAGACCATCTAGATTTAAAGTGAAAAACTTATTTTGGAGGATTTAG
AGTACAGATTACagcattacacgtttttttttaagaaactagttttacca
agcagccttaatgtttcttaagaaatcggccttttgacccttaaaaatgt
ttcttacatgtttctaaactttttgacataatcagcctatttttcataca
aagaaaaaaaaacatttgttttgattggaaggttgtTAAAataccgaatt
aaaaaatgttattttctcattctcagcctcagcatgtttcttagatgttt
cttagtttttaggcattctgagcctcatgtttcttaaaagtgtgtttctt
aaaaaaaaacaacgtgtatatCGAATCGTGTCataaatttcctttgttta
ctttcaatACAGGCAGAATAAAACTACAATTTGATACAATATAATTTAAT
GTTCATTTCAAACATTGGGAATAAATTAGTaaactttgttattttttcca
CCAAGTGaaatgatttatatatttacatattatattttacagattttacg
gaatgaaataaaaattgaataatacGGGCGGAGTTTCCGCGGAAAACCAA
AGACACAAAATCATTTCGGGAATTTGGTCCCATTATGCAAAAGCAGCCAG
CGAGACgaccttttttccgatgtgttctgagaccatatttcagctagaaa
ttttgatctgttctgaccagatcttcgaaaattaatcagctacaAATGAT
GATGTGTTCTGGTGAGACAGtggtataatcaaggtcatctaCTGTGtatt
cttgttgtctaggtagccctagaaagcttcagaacataTCTTTTAAGTAG
ACACGTATAATCCCCGTATAATCAAGAGAAATTtatgtaatcttgttgcc
tagtaaattttcagaacacatctttcgtggagcaaaacaaatatcttaca
agtttatcttggcaaactgtttttcctagattttagagcacatcaaacca
taaagtaatgataagtttagggagacaaataggGCGATAAAGGTTTctta
gaaatcagaacacataatttgtatgaaaaatttaatggtcataacatttg
gtctcttaagataagaacacatatttctaaaaaatctcggCTGCTTTTGC
ATTATGTGTTCGTCAAAAAAATGATAGGTTTTCAATCATTCAACGACCGT
TTTCGAAACCCTTAGTACGATATGTTCACAACCTAGTCAAATATTAAATA
TCCCTTCAGCTTTTTTTATATTCCGGTCCGTAAAATAcacacctttaaaa
aaatttatgactGTCAACAACAAGTAAATTCAGAAAGATTCAGACACGTG
CCTCTCCGATTATCATAGTTGACATCCCCAGCTCAGCTAGAGTACAGCGA
AATTGAACCTTTATCGACAAACGAACAAGTGCAAAATTATGGTACGGTAG
AGTCTcgttaactcgaatgtctcgttaactcgaacaaatttactCGTCGC
TTCAATTAACAATTTGCCTTAAATCttattccataactcgaaaattcctt
aactcgaacaaatttgtgttcctcgcGCAGATTCGAGTTCTAGACGCTCG
ACGGTTTAACAAACGAAGTATATTATGGTTTTCTTAGAAAGACGTACAAT
CTTTGACTATCGATAAATAGACAGTGAaagctaaaaaaatttaaaagttt
tccaTACTTGTATGCCAAAATGTTTTTGCTAGATACGAAGGCAATTTGTA
GACGCACACGTAAAGTACCTCTTATAAAGAAGAAAAGGTGGCCCCTAATG
GAGAATGACAAGCAACCCTATAATTTTTTGACGCAAAAATATTCTCCTTT
GAAGTCAGTACTGTCACGCTATCGTGAAAATTCTCTGATCAAAATCTACA
GGAAATTCACGATATTCATATAGCTTATTGTTGCAACACATGGCAAGTTC
CATGGGTTTCCGAGGTAAACTTTGACTCCATAAAATTGTTGTGCTTTTAG
ATTATCAACAGCGTGAACCTTTTCTCCATTTATTTCAATCGAATACTCGT
AAACGCCTCCGTTTTTATATCTTTGGCTGATCTTTATTTGGTACTGGTTA
TTGAACTCGATAGGAAGATCGAATTTATGGTTGAAATCATTTCCTACAGT
GGACGCAATCTGTAGTCTCCCATCAATACTATTATAAAATATTGCCGGTG
TACGCTCGCCATGCAAACCTTGATCATCGCCTTTTGTCATATGGAGTACG
GAACACCAATGCCCTCCTGGTATTCCAGTGTTTACATGATTTGCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053285TCONS_00053285Clytia hemisphaericatranscript
TCONS_00053286TCONS_00053286Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_228supercontigscaffold_228:280154..290849 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.65	0.64	0.23	0.58	0.28	0	0.05	0.12	0.16	0.07	0	0.08	0.79	0.58	0.03	0.13	0.21	0.03	0.7	1.22	0.55	0.47	0.41	0.2	0.28	0.53	0	0.19	0	0.05