XLOC_033592 (gene) - C. hemisphaerica

Overview
NameXLOC_033592
Unique NameXLOC_033592
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_227:285847..294288+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033592 ID=XLOC_033592|Name=XLOC_033592|organism=Clytia hemisphaerica|type=gene|length=8442bp|location=Sequence derived from alignment at scaffold_227:285847..294288+ (Clytia hemisphaerica)
GAAACATAGAAACATATAAAATAATGTTGATTTATTGGATAGCCATCTTA
TGTTTAATTACCTCATCATTAACCAGTAAGTTTTATTAATTGGGGGTAAT
AACGTCATCAATCTCGTGTAATTGAACTCAATTAAAGAAAAGATAAAGGT
CTTTTTTATTCTAGAATTGGGGCTTGGTTGGCCTGTTTCTTCCCATaaag
gggataaaaatttcgatcGCAATCCTAATTGGGAATAGAAATTCTTCTAT
TGTTCCAGGCTCAAAAAAATCTAGTGAGGGTGGGTTTTTGGAGTGCATTT
TCCTCCATTGGATTTttaatggggataaaatcaaaagtaaatttCCCAGT
GAGACTACTGAAGATTTGGGGTATCtttcccactggggacgaaATCTTGT
CTAGATTTTTCTATACAAGAGcgataaggcttcgatgaccatgcaaaatg
ttaagagcaaattaagaacatttcaaaggcTTTGTGGTctcaaaaaaccc
tttttttaggaaaatggcctaaaatactcacaaaatggtcaaaataagaa
catgctaagaacattttcaggcttaaaactcaaaaagttaaaaacatctg
aAGGCTAGATCAGGGGTGTAAATAAGTACATGATAAAACAATTTAAGGCT
TAAAGTGCAAAAAACAATAAGAACCAGCCCAACCAGAtcttcttacaaaa
aaaaaaagagtttctCATCGCATTAACTCTCTTGAAATTTTTAGGAGAAT
TGAGTAATGTACAGCAACAAAGACATGGCATTTTACTGAGAAACCGACGA
AACGATCCTGTAGAAGTCACTCCCAAACCACCCATTTCTATGGCTGCCAC
TGGTAATAAAAGTAACAATAACAAAGGTAGGTATTATTTTTAAACTAATC
ACGTAAGTGATTTTTCAATCCTAACCGCGATGACCTTTAGAAAGTGGCct
attttttaaaataatttttggccACCTAAATCATTGCAACTATTCCAAAC
TTCAAACTTGTGACCTAAACTTTTGCTTGGAAGTGGCTAGATAGTTTGAA
ACGTATTTCACAGGTCAACAgtttacaggtcacaggtccgCGTTGCCAGG
TCAGTCTTAATTACAGGAAACACTAAACAATTTTAATATGGCCTGTGACC
TGAGTATCTATGACCTGTGATTTGCTGACCTGTACCAGTGACCTGCCATT
ATCGAAGCAACCATTTGGAAGTCTTCAGTTACAGCTAAGCTAACGAGTGC
ATATTTTTAACGTCATATTGGAGACCAAGGCTCCGTTAGAATTCTAAGGG
GTTAAAAAACCTTCTTCTCTTCTTTAGATAACGAAGATTTGAAGATAGGT
CTGATTGTTGGTGGTGTATGTGCAGTCTTTATTGTTCTTGGCTTGTCCAT
TCTCACGTGTCGATGTTATGACAAAcatgaaagtcttttttattCAGTGG
AGAAGAGGGTGAGTGATTAAGAGACCCAGCTGGCACCCAacgctgtttca
acgttcatttaacgttatcttatatggacgttgtgaaggTTAAACAAACC
TTAAagtaacgttgtgtgccagctgggaatgaATTGTAATTCATTACAGT
CCTGCTCACAAACCCGGTAGAATGAATTTcctcagccagtgggggtaaaa
gtaATGGAATGAAACTGgattgggattgatattcccatattttttatggc
tgaaaatttaaattattttgttttaaatttaaaaaattcaattgGAATCG
AAAAAAACATcctgcagtgaggattggtttatttgattattttcagtggg
ggaAAAAATAGGGGTATAGTTCTCCATagaggacgatattttggctaatt
tttccagtggcaAGGGTCCCcattgggtctgtgagaagggggtgtttcat
taaattatatttcacaggacTATAAttgacctctacgaaataatctTGAA
GCTTAAAACCCAGcaagcacacaacgttgtttcaacgttcaaataatgtt
atttggacgttatgaatgtcaaatggacgttaaTACGACGTCGAGTGCCG
ACAgggaatacaccttttcaaccgtagccgccaattgccgcgtgggcatt
tttttgtccccTTTATCcaactaaaaccgtcccagtcattttttcgcacc
tatagacagtagaaattgtgtcaaaaaggattggatcgactTTAGGGAGA
TAATTAAATTATTAGATTGTACGCGcctgactacggtcgaaaaggtataC
ATATCTAATCCTTGTCTATCGTCCAGTCtgtagaaaaaaatagaaagacc
gggcgttttttttggtttttgtccTAGAGGGTTTCGAAAATTAGGAAAAG
ACTTTTATCTGGGCTGGTCTAGAGCCTCTTGTTTCAGAGTTTAAGTCCGT
TTATATTTTCTAAGTTTCCTTAACCCATTAAGTGCTATCACTTTTAGACG
TACCGGTACATGACCGAAAACTTTGGCACTCTCATATGATACCAGTGGCA
CTTAAATTCccccaatagacctttttataaattacgtcaagaacatcact
tgcctcgttctCAAACAATTGCCATgatgattatgtcccttgaggcaata
aatgattttttttaatgaaaagaaagtAGTTTTGATGAAATCCGCTGAGA
GttgatcaccatggcaataatttcacaACGAGGAAAGTGATGtttgtaac
gtaatttatgaaaagttctATCCCAGGTCTCTAATAGTGGAAACTCTCTT
TACTACAGACACGTCTGAGTCAAATCAAAAGAGAGGAAGCACATGATCCT
TACACTATGGTCATTTCTCCGGAAGCCGAAGTCATTGAACTGGATGAGAC
GGACGGAAAAGAAGGTGGATTTGAAAGACCACTGACCACTTTTCAACCGT
ATACAGGTATTTAAGTAATAAAGTATGGCCTTAAAGAGAAAGCCTTATTC
TAGGAGATATTGGatttatagcaaatttttgctttagaGAAGAcacacta
aaatatttattattactgacgtcatcaatgtgTGCTTTTCAGTATGGGAT
GTGGAAATAGTATAGACTTTTAgaccagagatttgggaaaagaggataag
aaacgccgctgccgctcgctgttttcctattctttccctttgaaatcggc
accctttgaagaagcaaggctgtagaatagttgagcaagaaggaaggtcg
aaacaaaatggcgttacgtacaggttaaccaatgttcaagaaagAAGTCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCTTAGAAAAACTT
CCTCCATGGTAATGGAATTGAGATTCAGTAAGTATACTTGATTTCCTCTG
TGGTACTTTTAGCTTTATCTAGGGAAAGCATTGACCTTTtcggttggaaa
tttcaagtttcgacAAAAAAAACATTGCAAAGTTCAAATAACTTCAACAT
GTGATATATAAAGTCTGACTATTGATGGGTCATGATTTTGGCCGGTCAGT
GGATTGACTCACAAGGCTTTGGCaacttttcagccaaaacatAATTTCAT
CGGTGGACTTTACAGTCTGTGTTAGGGTAATTCATACAGATTGCTTACAA
AAAATTGCTTCAAAAAAGCCCTAATTTTAcagtagattttcattttatat
attttcaggctAGTTATCGTCATTTTCTCTATGAAATACTGTTTATAACA
ACACTTCCCAGAAAAACCAGCCCACAGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATTTT
TAAACAATGAGTTACACATGTATTGGATTTAGTCCTCTATGGAGCATTAA
TATAATTTTCTAGTCCAGCTTTCAAGTTATACAATCTGAATCAGTAGTAA
GGTTACTAAGGTTGTAAGGTTTTGGTCTTTTTTTATAGTCTTCttaattt
tatttcaagttaagtCATGAATgatactgatttttttcatgcaatacatg
tttttttttataagcaagtgtatgccccttggtcaggctcgtgtatgctt
aagttctcaaagcatccaggcatagtttatgcttattatatgcttaagaa
tcatgctaATGATTCacccccgagccaagtttttaatgaaatttcagaaa
ttttgtaaaaatttgttcagattttgggagcagtggaatgtagctagcct
tggaatgtcttattttttacttgacctctaccaaaccttttttaaacaga
taaaaacgaccacttgaaaaatattttaggctgacatatatgctcatgtt
atgcttaggaattcagtaaatctgagccttcatatgcttataagtgttat
gcttataaaaaaaaaaacatgtacgtcTTTATAATTTCCCAGGTGTTATA
AATGAAGgtgaatcataaaaaaacccttttgggtttaatcttttttagaa
aaatttcaaattatacaCTTTTATTATACTGTTTTATTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGCGTAATTCTCCCCTTC
AGGCACAACGACGAAGGCTTGAGAAACACTACGTTCAAAgtgaaaagtgc
ttataaaaaatatcaaaattcctgatttaaaaaaaaattatttcactttc
gatatcaatcacggctgccattttttgtttgtacttctagtcttgtgcgc
ataacGAATCAAGCGCTCTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNAACAATCGATCGGCCgcagacatttcaatagaaacaaaagattct
acagcctagcttcaaatagatgaatagcgcatttcttatcctctttttcc
aaatctctgttTAGACTATCTATTTTGGTTGGGCTTAGGTGTGGTTAGAG
TGTGGTCAGATATCAAGGAGGCTTGAGATTAAGTTATTATCAGAGGATAA
GTGTTAGAGCTCAAAAAACAAGCCCTTGTTTACATTTTTACCTGCGTTAA
TGCTTTATCATAAACGCACTCAGATTCAATTCATCGACAAACGGCTCAAA
TTTAAGGGTTGTTGAAAACCCTTTTAACTTCTGcatatattttcaaaagt
ttctccTCATTTTCTTTATGTGCAGGTACTTTCACAGCCTTTCCCGGTAA
AAACAACAATTTCACCAGTAACAATCGAGACTCTGCTATTTCCTTACTGG
ACATTTTGGATGAAAGAGACAAAACAACTCTTATTGACCCACTTGAAGAA
AGTACTTTTGCCAGAGAAGGAACAGTTCATAACCCATTGTATCAAGATCA
TGGAGGTGTTGATAATGAAGGGATGGAACATGATGATGACGACTCGGATA
ATGAAAAGGTATAGGCTGATTCGGTAAATTCTATTTAGGCACTATCGTCA
GGCAAATCTCCAGCAAGCtgcctgttcctaactgactgatttttacccac
gaaataaaaataaagactACTTGCTTGCTTGCAAAGGCTATTTGCAGGTC
TAAACGGGAACACTGAACGCCTAAAAATTAGCAAGTGGTACTAAATCTTC
CTGTACATTTTCTTTCtgtcattttttggaaaattggttgatcgtgggtg
aaaatgacgtcagATATATTTCTTATATGATTGGCACCCCTGCTATGTCA
CTTTTCCAAATACTGATTGGTTTAAAAGCACCCATTTTATCCCCGTTAAT
GCAAAAACAGTTGCTTCGACCTTCATTTAACGTTTATGAGCGTTATGAAG
GCGAAATGGACGTTATATCGGGCGTTTTTCTAAACACTagtaacgtccat
ataacgtcatATCCCCGTCCATATGAAACAGCGTCTTGTCTCATAAAGGA
GGGCTGagagctagatgtcgtgctttggctgaaaagtgtgctgaggttag
gtaggaaatcgtacctaggtcacgtgacattacaatataatttcagcaCT
TGACCAATATGATGCTTCGCGggtttcgaaaacaatagcattaatatttc
actattttttgcttggaaaagcatAAAGTACGACATCtatcccttcgggc
tttacagaaatctgtggtcTCGTCattggtttatttttctttctcatcTC
TTTCTTTAAAACCCAGACATCAGAAGCTGAAGCACAAAATGACGAAGaat
ttccaaacatttttgATGACAGTTTCTTTAAAGAACCAATCACCTTATTA
TCATATGCAAAGAAACATGAAGAAGATGACGGTGCTGGTGATGTCGACTC
CAATACAATGTCAATAAAATCTGGTCAATCTGATGCACCATCTGATGATA
GGGAAGATAGTGAGCCATACCAAAGAGATTTCAATGAGAACCAATCATCC
AATACATACGAGGATATTAAAGAAAGGGAATATGAAGATATCAGAGATGC
TACCAACAGCaccaatgatgatgatgattctCCTGTAACCAAGGAACCAG
ATTATGCAACAATACCACGGAACACTCGCCCATTAGTCATTGAATGTGAC
TCTGAAAATTCTTCACCAGAGCCTTCGGATAATGAGGATGAAGAACCTTC
AGAATCACCGAAACAGGAAGTTAATTCTGATAATGATCGATCTTTATTGA
GAACTGGGTCTGTTGCCAAACTGGTAAACGCTTTCTTGACTAGAGATGTG
AACAAACGTGCAAATGATAGTGAAGATGATATCGTCAGTAATGATGGTGA
ACAAAGCCCTGTTGATGCACAGGCGTATAAAAATCCAAATTACCAACAAG
AGAAAACATTATTGAGATCCTACTCGAACCCTCTATTTGAAAttgaagat
gttgaaaattcAGAATCTAAAGATACTGAAACAACACCAGTAGAGTTGAA
GGATGAAAATCATTATCTAAAGGCTGTAGACAGTCCAGTTGTTGGGACAC
GGATTTCAGATCCTACTCTTGAAGAGGAAAACACATTCAACCAATATCTA
GACCAATCATCAAATGCTGATAACACCGACGATGAAGTTTCCGATAGAGG
TCTTTTAGATTCTGGCGATTTTACACCCAAAATTTTGGAAGCATCAGAAC
CAACCAACAACCAGCCAGAGCTGTTTTACAAAGATGGTAACAAGCCCACA
CAGAAtcaactaaataaaactccagTTCCAGCACCAAGGAAATCAATCAA
GATCGTTGCCACAAGTAGAGCTTCGATTAAAAGTCCTACTAAAAAAGATA
CTAAATCCCAACAGGAACCGTCCTCGAAGCCTCCACCTCCACCAGTAGCT
ATCAAACCAACCAAGTCTTTTGACCGAAATGAAGCTCTACCAGCTATAGG
AAGTCCAACAAAGAAACAACCACCTCCTGTTGCTCCTAAacaattttcaa
tcaaaagagGTCCCGTTAGATCACTGACTGTTCAGCCTGTAAGACGAGCT
CCCGCACCGCCTCCTAGAGTTCCTTCTGTCAGATATTAAATGAACGAATT
TCAACATGCAAAGTACCAACCGGAACTGGTACACAGTTATGACAACCTTG
TGTTACTAGCCTGGTTGGACCCCGCCCAAGGGTTGTGAGACTGAGGTGTG
TTATTGGCCCATTAAGAGCCTATTATATGCATGTACGTTTTGAGACTAGT
TGAATTAAGAAATCGACtcgtttttgaatgaaatttgagACTTTAAGAAA
TTATTTTACAGTGCAATAGGAAAATCTGAATGAAAGTAAGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053213TCONS_00053213Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053213-proteinTCONS_00053213-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_227supercontigscaffold_227:285847..294288 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.02	0	0	0	0.01	0.04	0	0	5.16	3.23	0	0	0.06	0.01	6.26	7.62	0.03	0.02	0	0	1.39	0.62	0	0	0	0