XLOC_032662 (gene) - C. hemisphaerica

Overview
NameXLOC_032662
Unique NameXLOC_032662
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_202:1071686..1080511+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032662 ID=XLOC_032662|Name=XLOC_032662|organism=Clytia hemisphaerica|type=gene|length=8826bp|location=Sequence derived from alignment at scaffold_202:1071686..1080511+ (Clytia hemisphaerica)
AGGTATTTTTTTAGAGTAATTTGTAGTCAAGTGTAAGATTTATAGAATTA TGAAATCGTTTGGATATCATGTCTTCTCCAACAAGAACAACATCAGTCAT TTTCAGACCAAATAGGTAAGctcatttctttgaaatttaacCATAAAGTA ACCATTTTTGTAAGTAGTTTGATTATTTTATAAAGTTCTAATATCGCAAA CTCTGGCACAAAATAATCTGCAGTGGAGACTAAAACTTTACTAAAACTTT ACTTACACTTGCTTTAACTTATGATAGAACCCGATTCAGGGGGCTCAGTA CTATAATCTCAGGCATATATGTGTACGTGAATCTTTAACATACTACCTCC CCACTCTAAAGAAATGGTACACACATGTACTAGAATTTTTGGGAACATTT TGACCCGCAGAAACCACCCTATTTTTGTCTTCTCAAAAGTATCTAATTTT GGAACATtcagacaaaagttgtataaaatttgccactactggcaaaaacc ggggtctttccgtagaaaacattacgtcatgaatatcattaattcaTTCT TTAAATTTGAGTTGGACTTAGGAAATTTTCTTCTAatgagaaagttttaa attctgAAAGTTTCACTGAGAAAGATAAAAACTGACCAAAATCACTAATT TTAGTACTAATAAGGCTAAAAGATCTTTGATACTTTAGTACCCCAATGTG CTAAAAGTACTTTTTTAGGAAtgccaccacgtcactaaataaCATGATTT CTGAGATTTAGTACCGAGCACCGTATccgttgaaaagataaccaacatat aaaaaaattgtacacccctgtgtcacagtccgcttggaccccagccccac tgaaaaatttggtaaaaaattcGTCCCCGGTATGAAAATACCTTAGAATT TCATCATCACTCGGAAATTGCCTTTGATTTTAACCCacttcgaaattcaa tgtttaaaaattgcactcaaaaaccatccccactggattttttaaccttg gaacaatagaattgccATCCCGATTGGAATTTCAATTGGGATTTTTTTAT CACCTCTGAGGAAAGAACTTCCATCGGAGCTgtaagacaggggtgtaatt gtTAAATCTTGGAATGtcagttttgaattttgagaaCTTTTTCCCTCTTC TAGTAGAACTGGGCCCTCTGAATAGGTGATcaatatttttgacaaattta ggGAATTCCCTGGCCTTGGTAGGATCAAAATATTTATAATCGGTTTGTTC AAAGAATGAGTAATCATTTACttgatcttttttataagaaactaagaACT TGATGcttaattttgacaaaaacctgagaataaattaagaacaattaTTT TCCTTGCCTCAGATTTCAGAGATGACTGCAAAAGACGCCGATATCAATCC TcttttataaacattttaagagcatttaaACCTGAAAATTACGAAAAAAT AAGAACTGCCAAGCCTCAGTCTAAATTtaccagttcttataaaaaagcct gTTTTGAATGTCAAGTACGTTTTAATATTCCCCAGTAACCAGGTCTTACC ATCTTGTTTATACGATATCAAAAACCGTATCAAAAAACTTATTTCCATAC AAAGAAAGTATTTAAAGGGTATATTGTAAAAGACTCAGTAAGTGATTGTA TTATTTGTCAGAATGTTATGAGATTGCCCTTATCATTTTCATTGCCCTGA ACACTCACTCGGCTAGACGAGCTAGTCTTTCTGGTTGAAGTTGAATTATG TTTTGGAAGAGGTAAGGGAGGAAAGAGAAGTTCTTTTCTGGAAATATTCA TATTTCTAATCAACAGTCCTGTCTCACCAGGCTGTACAGGGAAATTTACT AAATCAAGCTACTTTATTGCATCAAACAAGATTGGACATAAAAGTCACAC TGTATATAAGTTCGGTAACCCAATAAAGAACTAGACTATTTTTAACGGTA AAATTTTTCGTATTGATTTAGTCCCGAAATATTTACCTTTCCATTCATTT TTTAGGTCATCAAGTAAAGAAAACCAAGGTAAGAACCCGAAGAACCCAAA GAAACCTGAAGTACTTGGAATTACTTTATATTTCCTGCCTTTAACTTGTT CCATCTCTCAACGATTAGCTGCTTTACTTTGAATAggcgctttttttata aaaaaacaattttataaaagatCACGACGCTAAAAATcagccaaaaccta agaacaaattaaggacagttttaagaacaatgctgagcctcagatttcag aaatattGCTATTAATCAATATCATATTAGTTTCTTCAGCTAATCGAAAG ACTTGGTCACCCGAAGAACTGGCAACTTTTCAATATCCTGAAACAGAAGG ACAAAGGTATGTAGTAGCGCTCCCGNAAGAAAAGAAAACCAAGGTAAGAA CCCGAAGAACCCAAAGAAACCTGAGGTACCTGGAATTACTTTATATATTT CCTGCATTAACTTGTTCCATCCTTCAGTGATTAGCTGCTTTACTTTGAAT AGgcgcttttttataaaaaacaattttataaaagatCACGACGCTAAAAA TCAGCCagaacctaagaacaaattaaggacagtattaagaacaatgctaa gcctcagatttcagaaatattACTATTAATCAATATCATATTAGTTTCTC CAAATAATCGAAAGACTTGGTCACCCGAAGAACTGGCTACTTTTCAATAT CCTGAAACAGAAAGACAAAGGTATGTAGTAGCGCTTCCCCCAAAGCAAAA GGCTTCTTACTTAAATTTTCATCTTGAAAACAACTTTAGCCAGAAAGCAC TCAATTTTTAAAGGAGTTCTCAAAGTTACAGTGACTTTCCCAGCAGTGTG GATGAGAGCTCAGTAAATTTTACAATCCCTTTCCTTTTCTTGGTTTCTTA GAATTTTGTTAATCTTTCTTCTTACTTTGCGTTCACACTTATTTCAGTAG CCCATATTCAGGAAGAAGTTTGACAATAGAGTATGGCTCGAGATCATCGT TGCTTGAATCAAGAATACCGATTGCTATAGGGtgagaaaatttgaattat cgCAGCTTCAATTTTGTCATCATGTGTTTATTTCGAGGGCAAATAATGAG GGTGACTtcgaaaactcaaaaaatgaatacagtagactctctctaattcg agtcTCAAgagggaaaaaattttattcgaattacagagagatttgaatAG TAGAAAGTGTTTTATTAGAGTTTCCTAACAAAAACTGACGGTGACTTAGA TTtcgttcgaattatagaaagattcgaataatagaagttcgaattagaga gagtcaactttaTTCTTTTTTAGGGGTTTTGTCTTCACAGTTCGTGTATC AATATTAAGATTGAAGTTTTAGAATTCTGGATTGATCAGTACCTAATctt atttttgcttttgtttcttTAGGCGCAGTAAGAAAGATTTGCGAGGTAAT ATATCAATTCTGTGTGCTATGTGTGCCATGGATAGTATGAGAGTTGTAAG ACCGAAATACTGATACTGAATATTGAAATCCTCATTTTGATTTAGGTTGC ACGCATTTTTTCttatatgttttgatataaggGGTGCTCATTGTGTATGA AATTCctgtccgagagttaccccgtcttttttttagttttaaaaatttta ttagcTTGATTAGAAAGTTTTATATCAGAGATCTTtgtaaagaaaattga aagagGTTACCTCAAATTTCggcgggaattttatacacgattccccctat atcaaaatatatcagaggggatgcgtgcagcctaataTATCCCTGGACTC ATTTGATAGCTTTTTTTTATGATGTTTTTTTCAGCAAGTCGCGATTCAAT ACTGAGTACTGATTCATCCATAAGCACTGCACCTAACACGTAAGAGGCTT TTCTGATTCGTTAAGCCTTTATGAACAAGAATGTCTGTTCGCAATGCGTA CACTTCGTACCAGAAGGGGCTGTTTTTCCGAAATGAACTTGATTTGACAA AGCACTGCTTCTTCAAAAACAGACAGCGACATTCTAATAAATGGCCCGTT actgggattgtttcgagttaTTCAAAGTAATAATAATTAAGTTTTTAGCA GTACAGTAGAGTCCTTTTAACTTGAATCTCTATCGAATGTACAAGTACTC TTGTCTCTTCATTttaccttataaaccttactccataactcgacaTTTCC tttactcgaacaaatttgtattcCCCGTGCGtgctcgagttaaagagact ccactgtatttttTGTCGATAAGGGTATCATCCCACGCTAGACACTACTT TGTACGAGCCTTTCAGTGTTTAGCGACTAAAACTCacgatcaaaatattt tttgcatatGCTGTTACATCCCTTTTACGTTTCAGTAACCAAAGATTTAT ACACGATGATGGAGCAAGTAAGTCATTAGTAATTGAATCCCAGccttcaa aaacttttactgAGTTGCTTTGCAAAACTTTAAAATACCAATGATTTAAG TGAATCAATGTTGAGTTATCTTcttttttacacccctgtctcacagctcc ggtggaactttttcccacagttgggataaaaatttctatcgaaatcccaa tggggatagggGATGGGGTTCTATTGTTCCCGGGCTTAAAATATCCAGTG GAGATGGTTTTGGACAGCAaattttacattgaatttccaatggggataaa atcaaagtcaatttcccagtggggcttaaattgtagggtattttgtacac cggggacgaaatttcggccaaatttttcagtggggctggggtcccggtgg gtctgtgacacaggtgTGTTTTTAATGATAAAGAAAGGAGGTATACCTCT TATGCTGAAAAGGAAGATTAAGCAAAAGAATTTAGCAACATTTTTGCTCC GTCTTGGCAGTTCTtccttcttttgtttaaaaacgcTGCGTAGGCAAATG GTAGAAGATAAGTTAAATGACATAtcctttaaataaaaatgattgtctgt aggcggttttagaccactTTGAACTTGTCAGAGAaaaagatttgtaattg taatttcattgtctttttctGACGTCCACGCActattgtcttaaatctgc CAGTGAATTGTTGCCGaattaagatttttttgtgCTGTTTTTGGACATTA TCTTTATCGTACTCATATTCACGGagcaaaatgttcttttttggcCACAA TTTCTAGTGGGAATCACACCGTATCTCTTATGTCTACAAccaacgctctc taattcgacttttCGATACATACcctattattcgataatattgaaagcca ccGTCAAAAAGAAACTCTCACAAGTGACGCTCTACTATATTCGGTACGTT ACTCGatgaaatatttcttgaaaatcgaataagagagcgtcaaccGTATG TGATGTtataatgaataaaaaattcttcaaattttcagagcCTAAGAAAG TTCGGATGCGCACTGCCACCACTTCAGGTTCTCTCAAAACCACTGGTAAA TTCTTAGATGGAACACGCCCAAGAGGGCGTACGCTAACATCCCGCCCAAA GAGTTGTGAAATCAGGTTGGGTGACCAGGATAGTTTTGATGATGGAACTT TTGACAGCGGTATTTATGGTGCCTCGTCTCCGAATGATGAAAGCGAttct tcaatcaaaacaaaaacaaaatatgtgAAAAGAGAGTTGGTAAAGTTGAA AGGAAGGTCAGTATTATCTTAAGTTTTTatatattactttttaaattcat gatattcatgatgtaatgttttttctacggaaataccccggttttagcca gtagtggcaaatttaaactggacaaaagttgtataaaatttgccactact ggcgaaaaccggggtctttccgtaaaaaacattacatcatgaatatcatg aataacttGAAGGAAAGAGGTTAGGAGTCGCCGATGTCATCTTCCGCTAG TAAATTTTGCGTACATATTTCCATTGCGTCGCAGTATTTTACCTGGAAAG GGAACTTTCGAAATGATCTATatggaaaaatttttgaatctttCTTACAT ACAGTGCCAAAGATGACACTTCGATAAATGAACGCCTGACGGCAATCGAA GAATACATACAGACATATCTTCCGGACGAATGCAGAGTTAATCAAGGTAC AGTGGAAAGAAACTTCTTAACTCGGATCTCTATGATTTTAACGTCTCCTT TATAATCTGAACAAGTTTGCTGGTCCCCTCAGTTAATAATGCCTTACTCC ATACCTTGAAATTTCCCtcattcgaacaaatttgcatTCCCTGTATTCGG GTTATATGGGAAAAGAACATTACCTCcaacaaaaaatcaatttaaaattc TTCGTCTTCTTCAAGAATTTTAACGACTACGTTTTTCAGTTTTCCTTGCC AAAAATACCGTGGCTTTTTAAACTAACAGTTCTTAGAATACTGCGGAATA CACTGAAGATAGATCATTTCGTCTTAATCTTGCTTGAGGGTTCGCGACTG AACGACGAAGAAATAAATCGTCAGAAAGTTCATTGAGGTGTCACTACCAT AACTGAAATGAGACTACCACGTGACTTATATACCGACAAAGTGGAATTAA CAAAACAGAATTAGTAAAGTTAAACTTCAGACCATTGACCGAACTGAAAC CTATATATACCCCTATTGAAAATCTATGTAAATTGATTCTTACTGAATAA CTCATATTTGCATTAGTCGGTATACTCGAATATAAACCGGAAATTCCAAG GGGACCAGCTATCTTTCGAGTTGACGAGAGTTGAACTAAAGATAAATATG AAGGATAGTATAATAGGATAAGATTATCACAATGAACCAGAAAAACTTTC GAGTTATAGGAAAATTAAAGTTGTGGAGATTTAAGCCAATTGTACAACAG TATTTGTAGAAAATCTTCTCTATATAGGTGTGATGAAGCAAAGGAAACCA CGTCACCGATCCATCTCATCATCCTTGGCTGATCTTACAGCGGAAGATGT TGCAAAAGAAGGAGGGATCCCTTTCCATGGAATGGTACTCACTTtcccat caaaatttcaaggtaatTATGAATCATGCAATGGTAacgattttaatatt ttcttagtTTATTTTAGTGTTTGCAGATAGAGATATATAGATATGAgcct ccgaatgcattcggaatgggtcctacccacgaaggagtaggaatcacggc gctgacagacactgcgacttgacagacgcgagTTGCGAACGACACCGGGA GAGTAATTCTCATGCGaggccgaaccttatgagtaccacggcacgtcaca atgtctgtctaatctacccaTACTCTTTAGTGTTTACAGAGCTACAATAG AGCACTATCTGCTGTATTTTTTAGACCTTCATTaccaaataaataaatag aCGATTTGGTTAATTAAGCTCTAAGCTCTCACAAAGGCCTCCACGCCATA GACACCTGAGAATAAAGCTAAATTTGGCGATGGCTAGGGCCCGGGGGAAG GGgagggcactcatatggtccggcccacggcatgtgccgccattAAGGGT AGCTTTTTCGAAACCCTTGAAACGCACTGCAATGGTGtaattttgataga gtgcactacaaAAGTCCTTTTTTAGCTAGATACACTGTAAGGATGTCTTT GAGCATTTTGGGACTGCTGAATtgcaagtctgacagtaaaacTCTGACGT ACTTTACATTTTTGACTCGAACCCACTTTAATAGTGtgcacattgtgtcg acatctcaggCTTATTTTTGGGTGACTTCAGCAAAAAAAGTCATGCAATA AAACTACTACGGCTAATATGCGATCTAAAAGTTATGGTAATTtacagttt ttgagacatgccataacttagcCGAGCAATGTAAGGGTATATTTTCACTG TTCAAGAGCTACaatgtaagggtccgattttgaaatcaattttttgtggc GATATATGCCATCGATTAGAAATCGATTAGCCCCTCCCCCCCGGGACCAG GGTTAGTATTCTCCTTGGATTTAACTTTTAACTAGTGTTGATTTGTATTT TAGATATCACAGTGAACGAAGCAACGCAATGTTCAATTTTCGATGACACG AACGTTGTGACGGAGGATTTGANATCACAGTGAACGAAGCAACACAATTC TCAATTTTCGATGACACGAACGTTGTGACGGAGGATTtgaaagaattatc aaaaaaagtATTCGATTCTGAAGTGATGGATGATCTATTCAAAACATCAA CAAGAGCAAATCAAGAAGTTTTCAAAAGCATTTTAAAACGTTCAAAAAGT CTAGAAGAACTAACATACTTAATAGGTACTCATATGCCGACATACATGGT TTCCAGTCTGATTAAATGCATGGTTAGTTTAAATAACGCTAAAGGTGAAA TTTACAATGAAGTGGAGCACCTTATCAAGAAGTGCATCCGACATACCGAA AAACGAAAAACGAATAACGACAACAGACCTGAAATGGACACTTTGAAAGT GAATGAAGGGAATTCAACTCCAAGCCgaagttcttctttttcaaaacaaa cagccGTCTAATTCAAAAGATTCATTTCCCATGGTAACCAACGATGACTA GAATTCCGGGGGGGAGGGGTATCATAGTTTCATaaactttcttggggttt taGAATATATTCCTttgttttaaggctttgggacGCGAGAAGTtttgcaa catgctccatcccaccaacctgaaacactttctcgtgtctccaccccatt tttctttcaaccaataaaagtgaaaccTCACttttagtctacttcactgg actcagcgccatcaaaatcaGCAGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051559TCONS_00051559Clytia hemisphaericatranscript
TCONS_00051560TCONS_00051560Clytia hemisphaericatranscript
TCONS_00051561TCONS_00051561Clytia hemisphaericatranscript
TCONS_00051562TCONS_00051562Clytia hemisphaericatranscript
TCONS_00051563TCONS_00051563Clytia hemisphaericatranscript
TCONS_00051564TCONS_00051564Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051560-proteinTCONS_00051560-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:1071686..1080511 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17 0.08 0.14 0.23 0.04 0 0 0.15 0.26 1.53 0.15 0.21 8.29 3.14 0.47 0.3 0.58 0.2 8.23 8.62 8.73 9.36 2.72 3.42 6.76 5.69 3.11 5.04 0.16 0.24