XLOC_032562 (gene) - C. hemisphaerica

Overview
NameXLOC_032562
Unique NameXLOC_032562
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_201:379874..385917+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032562 ID=XLOC_032562|Name=XLOC_032562|organism=Clytia hemisphaerica|type=gene|length=6044bp|location=Sequence derived from alignment at scaffold_201:379874..385917+ (Clytia hemisphaerica)
CTGTATTCGTTGGTTTGAAGTTTCTGTAAACAGGCCTAATAacagaaatt ccaaaattctacTCTACGTAAAGAATCTGAGAAATTTGACATGGCTTCGA ATAAACAAAACATCATCCAAGAAGAAGAAATGGCAAGTCAGGCATGCGCA GTACAAACTGATCATTCGAAATGTTCCATTTGTCTAATGCCATTGGTCAA CCAAGGTTCTTCAAACAAATGTCACCAATGTATGGCAAAGATTGATTCTG TACCGAATGGTTTCCCTTTCGAGACCGTAGGACCAGAGAGAAAGGAATTT GAGTGTCCAATTTGTCTATGCATCATAAAAAATGCTACCGAACTCCCTTG CGAACATTTAATGTGCAAAGAATGTTTGGAACACTATGAAAAGGAACAAA ATGAAAGAGCTAAAAGGTATAAACCCAATAGACATACAactttgtttcaa cgtttatctaacgtccaTATAGCGtttgatgaacgttgaaacaaagttgt gtgccagctgggaaggaaACGCCGGATTTTGATGGGCATTTGAAAGCTCC CTTTATCTCCTCATATTTgttgaacaaaataaaacttaGTATCAtattat ggcgcgccaaagcggaaataaatactatctctcatttcgcgacactacct ttcatttcacgacactatctttcacttcgcggcactatctttcatttcgc gacactatctttcatttcgcgatactatcttttatttcgcgacactatct ttcatttcgcgacactatcttttatttcgcgacactatctttattaaaac gacactatcttttttaaaacgatactatctttccaaaaaaacattatctt aattgaaacaatactatcttaTTTAcgggatactatcttttttatggaag ccgagaagtgccatcgacaaaaaaatatttaatctcagaaaaaaataata aattttagaataaaagaatatttaattttagaaaaataaatttgaattca gagaaaaataattgattttagaaaaacgatttaaatttagaaacaaaata tttaattttagcaaaataaatttaaattgggaaaaaaatatttaacttta ttttagtaaaaaaaaaaaaacttagaaaaattatcaatttagagaaaaaa atttaattttactttagaaaaaaaattaaaaccttaaaacataCCTTATT AATTGGAACTACttctcgcgggttttaattttagcgcttTTCGTGGTTTG TTATGTACATTAATTTTTGTTACCGAAATCTAACGCAACCGTTACCTACC TTTTTATGATACtctacttttatgcaaaaaatgagaaaaatttttacCTA CGTTGTTATTATGGGGAAAAAATGTCAGCGGAAagcaagtgacgaaaatt ttgaaggggtgacgaaatttttccccaacaAAATTTATTCCCAACATTTC ATCACctgaccaaaactttttttacccgatttttttattcccgaccaaaa acttttactcaatttttcccCAAACCAAActtcaaatccaaattttttac acctttattaaccgaaattagtgttttataaacgtcgaattacaagatct attttcgagctaactaagtgaagaaaaccatttcatttggacagtTTAGT CATGTGAAAGTGACTagctaaattgtaaatttggtcggggaaaagtgacg aatttgaaattttggtcgggagaaagtgaagaaaatacCTCTAGGTGACG ATTTTTTTCCCTGACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGACGATTTTTTTCCCTGAC GAAATAAAActtcgacattttttccccaatAAATAAAAGGTATTAAATAT TGAGCATAATATCGGTTCTGTCAACTTGAATTGATTGTGGATTGACATCT ATGTgatgtgcaaaaaaataatctgGTCTGAACAAAAGTGAAATCCAAAA ACAAATCCAGTAAgtatgaaaacgaaagttgtaaGTAAGTGTGTGGCCCG GGAGGAATCAggccaaaaagtttttcttttttcaaatttttttcagacgg tGGACTTTTGGTGTAAGCATGCACGGAATCAGGCTCtcccaaaaaaacag ttttttctgaagtgaacttaattttttctctaaattgatattttttctaa atttaatttttcttactaaaagtaaatattttttttctaaaattaaatat ttttttctcgatggcacttctcggcttccataataAAAATGGTATCTTgt gaaaaagatagtattgtttcaattaaaagaatgtttttttgggaaaatag tgtcgcgaactgaaagatagtgtcgcgaactgaaagatagtttcgcgaaa tgaaagatagtgccgcgaaatgaaagatagtgccgcgaaatgaaagatag tcccgcgaaatgaaagatagtgccgcgaaatgaaagatagtgtcgcgaaa tgaaagatagtatttatttccgctttggcgcacCATATCATATATCATTT TACCTGACAGTTGCTTTGTtattacagaaaaatgttttgtACACTGCTTT TTCTTTTAGGGTTGGATTGGATGAAGCAGAATTCCTTTGCAGTATTTGCC AAACAGAATATAAAATTGCAGATGTAAGCATATCATTTCTCCGTCTTGTC TATTAGTGTTGCGTACatattttcctgaaatttttttaattatattttct tattaAGTCAAGGGCTTTCTTTTGCCACAGTTATCTTTAAAAATAGTTCT GACTCAAGATAGTTTTACAAAATAGCTTTACACAAGCTCGAATTTCGAAT AAAAGGGGACTCGAATAGCTGGATGTCTACTGTCCTTACAGTTGATACAC TCTAATATATCTAACTATTCTCGGGTATCTAATAGCCACCCTCCCCCGCc aattaagtttttgaaaatttcccaccgaggacattcttattccaactccc cccccccgcttattgattttttaggaaaatgtttttaaaagttcccTTTT TCAGATTGGATGTTGGCGCTTTCAatgctcaaattttttctgtgtattta gaccttttcataaattacgtcacgaacatcacttgcctcgtattcaaaca attaccatggtgattgtgtcccttgagacattaaatgattcttttatGAA TAGGAAGTAGTTTTAATAAAAcctgctgggagttaatcaccatggtaata atttcaaaacgaggcaagtgatgttcgtgacgtaatttatgaaaaggtct attcgccGGTCCTGAGCTTGGCTCATATCATGaaattgtctttttctttt aaatgttaGAAAAACGCAGTCCGATCGACAGATCGCATGATTCAAACGAC TCTTCAAGTGAAATGCTTGCAGAAAAAGTGTCAATGGGTCGGATGTATCA TGGATTATGAGGTATGAGGTatttcactttaaaaaaatcaaaattgaatt cACTGTATATTTCAAACAAATCCGATTTCTATGCCTTTCGCCTATGCTCA AGATCAATTCTTTTGAGTGCCAAAACTCTATGATTTTTTAAGTGCTCATC AATTTAACGGTTAGTAGAAGGAATTTTTTCAGATTCTTGATCGTCCCCCG GGGGGGGGctactcgatttcgaaacgacggtatgtgccgcgaaAAATCTG CTTTTTAAAATCGTGCatttacagtgcagttcaatatggctgaaaaggta cccttttcaagaaaaactgaGCAAATTATTCTTATCAACTGttattatca gacaatagaaacttttaaaaaaaacgagaagtaaaaacctttctttttat caataattttgaatttgttttaaaattcgacccttgcagtgcaatctcac agaaacacaccctttcagtgcatatttttgggatgctgaaaaaccccaac cttaagcgcggcacatgacgtaggccagatcatatgagtgcccccccccc cccggtgatCGTCACTtgaattttttagtcaaagcacttgttttTGGAAT GTATAATGActcatagctgtcaacttcgcctcacaaaaatgcgggagagc tccaagtcggaaaaactttccccgataatccgatttttcaaaatcggaaa atcggaaaatctgggaaattttctcgtaaaatccgattttattggaaatt tttttcgcgAAATTGGGGAATTTTTCGTTCCGATCTTTCAAAATCCAGAA ATTTCGCCGTTTGGTTTTtacaaaatcagaaaatttttggaaatgcggga gatgcgggagaaaatcccaaaaatgcgggagatttggcagaattttcttc acgcgggagaaatcgttgacatgcgggagtctcccgctcaatgcgggaga gttgacagctatgtaatgtataagaaatcaaatttacatttacatccaat tttttttcggagaATAGTGTAATTCACAGACCAGAAAAGAAAACGTCCGA AAATCACCGAAATCACAATGTATGTAATGTAATGTGGCTCAATGTATCTT TAAAAATTCAACTTACTGTAGGGGTTAACATTCCTTTAATTGTGAATTCA CAGGTCCACAAGATAAATCGATGTAATTTTGAACTAATCCGATGCTCGTA TTACGATTTGGGATGTTTGACCAATGTAAGTAAAGCGTCCACGTTCGATT TTGTAAAGTATCGTTCACGAAGCACCCAAAACACCCCTGTATCGCCCTCG taaaaaaagttgagaaaacCATTCTGTGGTGATTCGAATTAGTTGTACGG AGACCATCCTAGGCGATTCCAGGGCGAACATCACCAACGTTTTTATTTGG ATATTATTTGATGAGTTTTACGCCTGGTACGCGATCTCGAAAGTTTTTCT TATACACTTCACAAACGCGCTTGCTTCAAAATAACAGAATTGAGCTGCTA GACAAGCTGTGCTCAAATTTGTCGAAATTTTTTAAGGGTCTAATTTTGAG ACCCTCATTATGTCCACACATACGGTAGCTTTTCAGATTAAAGATGAATA CACCCTGGGGGAGAGGGTATTTGCAATCTTCTCTGTGCAATCTGTCGATT TATTCGCCAGAATTGAGATTTAAGGAATAGAGCTCatacaaaacaaattt tgtttttcgtttCGACAGATCCTAAAAGGGGATGTCCAAAAGCACAACCA AACAAACCGCTTCATTCATCACTCTCTGCTTTTGACAGCAGTTAGTGCTT TTTCTGAAGAAAGAAAAGGATATCGTCAAAAGATCGAAAGTCAAGACCTT AAAATCCAAAGTCTTCAAGACGAAAATAATGAGAGATTTCAAGCTTTGGA AAGGAGAATGGATGCACAAAGCAACCTTGTTGATGGTGTTGTCAAGAAAA TGCAAGCactggaaaaagaaaatgttgatttagtagaaaaagtgaagcaa cAGGACAAGACAATCGAAGAGATGTACAAGGAAGTTatcagaaaaaaagt tgaagcaGAAAAGAATATTCTTGAggtacaacaacaacaaaatcatAGAA ACAACCAAGCTCTTTTCAGATTatcagaaaatgataaaaatgataaactA CGTAAAAAGATATATTGTTCAGTAGCTGGTTGTGATCAGAATGTACGCTC AATAAACGATAATCAATGTGAACACCATTACAATTTCAACCAACAGAAAC AAGTAGAGAAGAAAATCGAGAAGGAAATGTGTTGGAATTGCAACAACAAT TTTGCAGATGATAACGCTCTTGGCACGTGTACAGTATGCGTGGCGACGCA AGATAATCTCATCAAAGAAGCGCAACAAGTTGATCTTTTCAGTTTACCGG ACCTTCCCCGGGTCCAACAACCTCCACCACAAGCAGAACGTCGTAAACGA GCAGATCGATGGCAATCGCATTattcaaagtaaaaacaaaggaaGCGAAA TTAAAATAAACTTTTCGAAAGTGTAAATTTTGATTCGAATTTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051386TCONS_00051386Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00051386-proteinTCONS_00051386-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_201supercontigscaffold_201:379874..385917 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.73 0.73 0.22 0.45 2.12 2.04 2.02 3.18 1.36 2.34 2.41 1.45 4.29 2.93 2.08 2.55 3.07 2.46 3.46 3.72 2.25 1.94 2.46 2.17 4.91 4.78 1.44 2.62 2.47 2.56