XLOC_031928 (gene) - C. hemisphaerica

Overview
NameXLOC_031928
Unique NameXLOC_031928
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_171:178536..181898+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031928 ID=XLOC_031928|Name=XLOC_031928|organism=Clytia hemisphaerica|type=gene|length=3363bp|location=Sequence derived from alignment at scaffold_171:178536..181898+ (Clytia hemisphaerica)
CTCACTGGACAATAGTTTACAAAATGAGGTCACCTTTCTCAAAGATGAGT
TAGCCAATTTGGAAATGAAGAAAAGCCAGGAAATCTTAACACTAAGCGAG
GTAAACAATTATTGGATACATATAAAGTTTCAAGTGGtcgaaattaaatt
gaaatgtcTCTGAAAAATAGACCATTGAGACCAAAAATAATTGTTACTCT
CGGGGCTAGGtagggggtttggaataagcgggggggggggctgaagttgg
gttggaaaaaaatgtactgggtggaaaattttgaaaaggacGCTAATata
gcagaattagggcaaaagagggaactttttcccaaaaattattAAGGGGG
GGGGTGATTgttcgaataaaaatgtcttgagtggaaaattttcgaaaatt
aatgggcgggggacgcttattaggcacctgagagtaacCAGGAACAGAGA
AGAGCCATCCTATAGGTTTATGTCTTTAGCAATGATCAAAAACTGAATGA
CAACCATTGATTCGAAAACCTTTTGCCAGAAAAAGTCTTTTACACATCAT
GATACTCAAATTAAAGTATTTGCTTAGCTTTTACTCCATTGTAAAATGTG
CTAACTATATGTACTAGAGAACTGAGCGACAAATCAGCACTCTTCATGTC
CTCCGCCACAAAAGAGAAAAACTTGATACAAGAAGAGAACGAACAGCTGA
AAGAATCACTTTCCAAGAAAGAACATCTTTGTTTACAACTGCAAGaaata
ttgaatgaaaaatcaCAACAAATCGTCCGCATGCAACACAAGGAGACTGA
AAACAGATCCAATTTAAATACAGAGGTAGTTGTGGTTAATTTGCTTTGAT
CAGAttattttcgcgagattaaatcaCGTGAGATTACTTacgcgaaactt
ttttaaaacGCTGATTTTTGATTCGCAAATCTTTTGgctcgcaaaattaa
atcttgCAAAGATTTTAAATACGATCTAAATGATTTCTAGCATCTATAtc
gtatttttgtctcgatcctccgtccaATATATACGATCTAAATATATTGC
ATCAAATTTCTACTAGAAGCCGTTTTTCGAAATCTTAATTGAATATAGGG
TCACGTCTGTTTGTGCCGTAACGTGAAGTTATATCATTCAGCTATTGTAC
GCAAGTCTGCGGGCTAGGTCACACTAAAGATTTCCAAGATTGCATTTGGT
ACCTCTTTTACTTGATGCTCAGCAGCTAGAGACACAGACCCAGGAAAATG
AGAGTGGctccctcccctaccttcggataGTCCTAAAGAAAAGAGAGCCT
CTGGGTTTCCTTCAAGTTGGGTCGGAAACTTACGTATATATGGCGTGTTT
CTATAGATCACCTCCAATATAACAAACCAGGTTATTTCGTTTTCCTTGAT
TTAATCTTGTAATGCATCAATTATACAGGTCAAAAATTTGCGATCGAAGA
AAAGTCAATTGGAAAATCGTGTATCAGACCTGGAAAAGGTAGATTTCATT
TCTCTTTTAGAATTGAAGTTatatatttctttaaaattatctgcatagtt
caaattttcttttcgacCCTTATAATTATAATGATATTTTACGACCGCCT
ACGTCGTAGGTTTGGCCTGGACGGAACAATCTCTAATGTTTGCGAGAGAC
TAATTCCATACCAGACCTCCCTAATTTCTTGCTCATGGTAATTGCACAAA
ACCTattcatgtttttgttttcaagactTGATCCACCAAAGTTTTCACGG
GACGACCTTTCTTTATATAACGATCGTCATTAAACATGAGCATTTTTGTT
GTCTTCCCTATTCTTTAATTACGGTGTGTTTATTTTCGCTAACAGGCTTT
TTACAAACAATTATCAAAGATCAAAGAGTTTGAATCACAATTCAAAGAAA
TGAAAGAACAACGTGATATTTCAATGATAGTAAGGTCTTGTTTGAAAACC
CTTCTGTTCACTTTTTCTCTTAGtttgaaccacaagtgattttgtgGTTT
AGAGATGTTGGCTAAATCGATCTGGCCAGCCAGGGTGCAGTACGCAGTGC
TGATGAGTcccaataaggacgaaatgcatgctgctctgccacccaaatct
cccgagtgaatatagttggacagaaatttttattttcttcacatgtataa
aaaaatttacgaaTATAAGTTGAAAGAGTAGACTTGTTTCCTTTGTATGA
TATGTAGTCTCCCTTTTTCCTTGGGTACGTCTTgtcatcaaaatccaaaa
caCTTAGTATAATCTGCTTCATTATTTCGCTTTTTTATATGTTAGgccaa
agaagaagaaatagCTGAATTGAAACAACAAAACGAATTTTTGAAGAACG
AAATGAAAAACGTTCAGAACGACGTCTATACTAATCCCGTAAGAATTTTG
ATATTATCGATGGTTTTTAGATGAAAGGGAACAATCAAAGTTAGACAGTA
TTAAAtgccttatgttaaagttgcaACAGGGGTATCTATTCTAATTCTTT
ATGAGATGAATTGTATGCTCTTTCACTAGGAGTGATGGCCAAGTGGTCTA
GCGCGTCCGCGTCTCAAACCAGGGGTTCGCGGCTCCCTGCGGCTCCCTGC
GGCTCCCTGCGGCTCCCCGCttcttccaatgttccgttcagttcaaaGAT
AGCAGAGCCGGTTgaccgtggaccccgtgaaaacaatagaaagactgtct
aaaagtcctagattactgggctatccgcGTAAAATGTCGACTCTATCCTA
TAACTAGGAAATAAATTGCCAAGAGCCAGATTCGTTTTAATAGCATTAAG
AGACAGTATTGAGGATATCTTACATTCTGGAGCCAAACGTTCTCTTTCTC
CAGCTTTAATGAAATGATGTTATTGCCGTATTACCGGAGAGGGGCAAGAG
AGGCCAATAATCTTTTTAGAAGTGTGTATTGTAATAGATTAGGAACTTTT
GAATTGAATGCTGTCTTTATTTCAATGAACGTGTTTTTAGCGATATAGAC
TTCTAAATTCTTAAAATCCTTAGCTAAATATATAGATTAGGAAGTAAGTC
TCCACTGTACCACTAGACTCGTGCCCACTCCATATTTCCTGTTGTATAGA
AAACTACAATATCTGAAATATCTCCCACTTAGGAGACCACTAGACCTCTA
AATTTCCATAGCTTCAAAGTCTCAGAGTCTCTAATATCCCTGCTGTatag
aatattttgatttttgtaacgTCTCATACTTCTAGGAGATCACAACCCTA
CGAACACAATTGATGAGAGAAGTCCAGAAAAACAAACAGTTACAACAAGA
CCTTCGGAATGTTGATGATATACACCGTAATctcgaaaatgtcaaatttc
aactCAACCAGGt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050423TCONS_00050423Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050423-proteinTCONS_00050423-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_171supercontigscaffold_171:178536..181898 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.14	3.43	1.04	1.46	17.45	15.07	8.21	9.26	5.11	6.15	6.52	4.1	3.33	1.39	3.13	3.82	3.74	4.57	1.32	0.93	2.29	2.21	5.06	4.64	7.7	8.09	1.49	1.37	5.06	4.37