XLOC_031901 (gene) - C. hemisphaerica

Overview
NameXLOC_031901
Unique NameXLOC_031901
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_17:78175..88756+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031901 ID=XLOC_031901|Name=XLOC_031901|organism=Clytia hemisphaerica|type=gene|length=10582bp|location=Sequence derived from alignment at scaffold_17:78175..88756+ (Clytia hemisphaerica)
tattgctgattttaaagtaaatttgacaaaaagttatgtcctcAACCAAC
AAGGTATGAAACcttgttttctaattttttattgatcaactgaaatatag
aaaacttttggttttttttgaaagcttataatgagtccttcaaatctaga
atgaaGTTACCTGATCATagccagttttcttttcatgaagtcaaacttta
tggGAATATTTTTNAGCTTAATATATTAGCCATGGACTGAAATCTAAGAC
AGGTATTAGATTAGCATATTTCATCTTAAATGAAGTGTAAACAacaaaga
gttttttgccaaatttgtctgATTATAACTACTCTAGGTCAAATTTCTGG
ACCAAGCCAGTTTGATTAAGCCCTGATattatgttttctgaaaattgaag
tcattaataaaaagattatccaggactaaaagtgaaattcaaaaatttat
tttttcaaaattctttcacCTATTTGGGTGACATTACCAGATTCATGCTC
AGCAAACACTTTAATGGTACGAGAgggaaaatatgaaaattcaaattcat
caaaatttaaaccTAAAGTCTGTCTTAAAAGTATGACATTATGACTCTAA
TTTGTCCAGTGGACAATAGaagacaaatgaaaaaaacatttttcttctaA
TTCCTCAGGAACCCTGCAAATACTAATACTTTGAATATCAGAGgacaaga
tttcaaaaaaaataaaccagccgaggctggaaggtcagccaaaagAGCTA
AGAGGGTTGGAAGGGTCAAAGGGGTGAAAGGGATCATTTTGATGAGATGT
GAGCAAATGTTAGATCAGCGTTCGATACAATGGCAATTAGCTGCCGGTTG
AAAAGTCCAGGAACTTCGCTCGTTTGGGATGTTAGTTAGTCTACATAGTG
TANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NgtaactttctgcagtccgctttctgcaagtccgATAAAAGATATGTAAA
AACTGTtgtcgccattcattccatatcAACCATTTAGTTAAAGCCAAAAA
CGTGTGCAAAGATCAGAAAAATCTGCTGTTCcaaactgcgtgaaaaataa
tttgatcaatttcaacaaaaactgtatatatatatatcaataattgatca
aattccaaagaccatttgtcataattttgaaagtccaataataggagatg
tgatcgtcatcatttggttcccgtcatctgaccgaccctgatttacagtc
agcaggtagagccagatatcaacaagtcccatgttgcgtactcgtcccaa
gttggagcagttgatggtactAGACAGTCCGGTGTAGTCCGGTGtgcact
tttgaaaatttaatgaagaaaaCACAAGACAAAAAATAACGCCGGAATGT
CCGGTGTATCAGCAGGGTCGTCTGAAgccaaacacgtccaagtccaaaaa
aaaaacgattgcatccagtctttatcaaatttagacagtagctgtatgTA
CTTTTGtatactttatcaaattccaataacattatacaGACCTGCCAACT
TGAGATGTGCATTTtgcgtgagataaaaatttcaaaggaaaatccGAAAT
CTTAGTCCGATTTTTCCGATTTCGGAAaccggaaatttttttccaaaaga
tcgaaaatctgggaaaatttttccaaaaatccgAAATCTTAGTCCGATTT
TTCCGATTTCGGAAaccggaaatttttttccaaaagatcgaaaatctggg
aaaatttttccaaaaatcagaaatctgggaaaaaaatttctgaaaatcag
aaaattgttttccgaaaatcggaacATTGgggaaacttttttaaaaaaat
cggaaaaacaaggaaatttattttaaatgtcaaaaatgcatgagaaatca
aacttttgaaaaagtgcGTGAGACAGTGTTGGAATGCGTGAGTCTCACGT
CCAATGCGNTTTGAAAAAGTGCGCGAGACAGTGTTGGAATGCGTGAGTCT
CAGgtccaatgcgtgagagttggcacctctgattataacaccatcaattc
cccctctagaggcaaacaagaaaaatatgtttttatttcaaaaactactg
taataaaaagcaaaaataaaaagtatcagaaaattcaacataaacaaaaa
cttgNccaggaatacaaaagaaggaatGAAAGTATGTGATTACTAAAACC
Tttaaatgcataattagaataattaacataatatatgcatggatcgtgca
tcgcgcatcgtgaatcgttggatcgcgcatcgtaaattacacaaaccgtt
cataagatgtagaaaaagaatccccttgatgaaaatcatgtgtttgattt
gccaagttaaaaaaataaatgacagatattgaagcttgcaacagattcaC
CCTGGAAATACTTTGAAACAACACTTTATaaacttatcgcttgagccgcc
atcttgaaacaccacattatgatctgtaaaaacaacacacgctaaaagta
cccaaaaagttaagtaagtaagtaagtatttatttaccatttaacactac
aaaaaagatacaagtgatgatatgcacaaaaaatatatggagggagaccg
ccttatagtctagccccgggggggtacttaggcaaatggagggtacggta
tgtgccgcccttaagggtagtttttggatttccaaagtcccgctaagggt
cggaaaaatcagaaaatcaaatttcagtcccactaagggtcggaaaaata
ggaaaattttaactttttaccNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNcccgctaagggtcggaaaattcccaaaattttcctttg
ttttctcctttttagtcccggtaagggtccaaagttcaaaagtcgggcgg
cacccccccgtcagctcgcaaccctagtacccccccgggagtctagctaa
tcaaaaagatgcggccacctaagtACAGATTGCGTTTATAACACTTTGta
aattatttataaatatttatatttttaagaatttttttNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTGGCGTCTTATGG
AAgaactggaaaattttacctatttgaatgcccagcttaggctgaccaat
caGGATCAAGATTTCTAATTGGAAGACACTACATTGCAAAACTTGGAAAA
TCTAATTTCGAAGAAGGGAAAGAGATATTCGTATGatatgattttatttt
caaatgtttctaaTCCTTTCGTGGAGTCAGGGTGTTTCAgaattaataaa
aaaagaacaattacattattttagttttcttttcaaaatcgatttttctt
tgttttggaaAGTAATTTCTAAAGTCACAAAGTTGTGTTGTTAGCACTCA
TTGGACTGACGGGTGAAGATAATATGAATTGAGCTGTCTAAGGCTAAGCC
AATTCACTAGTCACGTCTACGAAAATTCAATGTAGAGATAAATTATCGCA
AAATATAGTTGGTTAAGATTATATATTGTTTTTCGAGTCACTGTGTAATA
TTTTTCCTGccaatttttgaagtcaaaaactaattttgtCCTACAAAGGG
TCTATTTAGAACACACTTTTACTAACCTCTGCATAGGTTATCCATTATTC
CAATGCTGAAGTTCTTAGTAGAGGCATTTAAACtcataaaaactttgatt
aAAGATTTGTTTATGAATCCCCAAATCCCCAGCCCCCACCATTGAAAACC
TTGGTTTGGCAAAAAAACCTGATCTCAAGACAATGAGCCCTTCACAATTG
TTTAAACATCCTAAGACCGTGAATATAAAGAAATAGCCTGAAGCCGCCCG
GATCCACAAAGGCCACACACAACGATCACAAAATCACTTCTACACTTGCA
GATTGAGGCGTTCACCTCGTGTTCTTACAAGGAATACAGCTGCGACTGCT
TTTAGGTgcttaatatttgtttttaagtataGGCTACACAAAGACATTTT
TGCCACTCGCTTATTTAATATTTCGTTTCTGTGCGCGAAGTggattttgt
ttataaaaaaagagcCGATTTTTTTGACTCAAAATGAAACATCTTTTCTC
AAATATATAGAGTCGGTTGGAGGACAAGAACCAAACCATCAATTAGGCTT
Ggcctaaagtctgtctcaaaataatttgcagctggagaaaaaaatagctg
taacttttgatagaattcgaatgaattgcgattttgtgctcctTAAAAAG
ATaatcgtgagtggaatattatgaagtaaaaaattttagaaaaaaaagga
aaatgaaaatgaaaaatgaagaagaaaaaaatcgatttcttgtagaaatg
tggtataattaccattttcacaggagtgattcatcaatcttagatcatta
tcactctcaaaaaatttttcaaaaatattcattcaatcaaaagatatcaa
acaaagtttattgctggttgactctataaacactatactataaagtagta
aaaaacgacaaaaaaaacagccttttgtcgatcaaccagcaataaacttt
gtttgatatcttttgattgaatgaatatttaaattgaaaaatcttttcac
actgatgatgatctaagattgaagagtcacaccaggacaaagtttttgca
agcgaggcgagggaagatatgacagtcagggaaatccctcaattgcggta
tactgcaattgcggtagttttcattcgtgcctacaaaggcttataacagc
tacatatagtgctggtcaacaaacatcgactgtaaaaaatcgtacgagaa
gatagcttttctttattaaaagaatctgatctacggaaaaaatattttgt
ctgtgcgttCAAAAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATATGaccaa
ttatgtacaaaaattgcctgttttctccttgaatcttgaattctgtttct
tgaatatactgcaattgcggtatatgaaaaattcaaaagtgaagTTTATC
CCGCAATTGCAGTAAGaaattactaccgcaattgagggatttccctgact
gtatgaggatttaatatcatcgaactaatcgaactttttactgaccgaac
tgatcgaactgctattgcttaaaaaattgtgagtgttcgatataggttcg
attaatttttttaattgaattttaatCGTTTGACTGGGTTCGCTTAGTTT
GaattgtttgattggttcgacaagttcgattgatcggatCTCTGGCATGT
tatatgacagaaagtatgattgataaacttggtggagttatcaaaacaaa
tttgttgtcaaagagatttaaagtaagtgaaaatacaggtcAGATATACA
ACAAGTCCCATGGTCAAGTTATTCAAAGCCTTTCAAAGCCTGTCGCACGC
GTTCGTTCGCCAAAACGACAATTGCTATTGGGTTGCAAAATCTCACAGAC
TCTAGACTAGACACAAAATAGCAAAGCAGAAGATTATGAATACAATAAGA
ACAGATCATACTCACTTATACTTTAAGGTGAATAGTAGAAATGTGTCAAT
CACGAGGTTCAACTTATATACCTGCTtgaccttttttgaaatttgagtaG
GCTCCATCCAGCtaaactttcactttcgttttcggaagTTACTAGACTGC
GCTTCTTTTGTAGCGCCTGCTCCACGATAGAGGCTAAATCTAACGTCACC
ATAGTAACGTTTGATAATGGCagagaacaaaaacaaaaaaagtcgGCCAT
TTGTTCTTCTCAAATTACAGCGCGAGGACATATCTCGAGTGCGCAGGGGC
CTTTTTGggtttttctaacttttatgggattttaatttcttttgtaaaag
taGGTAGAATGCATCGTGCTTACCAATCGATAACTCCTGCCAACAATAAA
CTTTTAAAGCAGAGATGGGATATGACAAGATATGATACACATCGGAAAAA
GGTAAGACGTTGGCATgtgttttcttttcaacttttgatatttctttAAG
CATCACCAGTGCTTAAAAATGTAAAACGCAATAGGTTTTCTGCTGAAGTT
TATTAATCGTTATTTTTGTTGCTCCGTAACGCTTCAGAGGGCTagaattt
tcgcgaaaaagacTAAAATTTTCGAATACCTTATTAACTTCAGCGAATAA
AATAATGGTTAATTGCTTTCTTCATTTTCAGGTTCGTCAGGCAAGCGCAG
TGATCGATAACCATGCCCCCTGTACATATTTGCATCTACActtgaaactt
aaaaaaatgCAGGTAACTTACGTTTAAACCTTTATCATAATTTAGATGAG
CAGTACTCCGTTTGGATTATTACAGTATGTTTTATAGACTGGACTTTTTT
GGAAATCATCTTTATACTCTTATGGAGGGGCCTTAGTATAGTTATTGATA
CTGTGTATATGCAACAAATTGCCGTTCGAATTCTAGATTGAGGGAGAAAA
CTTAGCAACTGTGGAAAGAGACAATCGAATTTTATTGGAGAAAATGTCAC
ATATCATGAGAACCAAAGGGCGTGTAGATAATCGCAACTACTACGAACAC
AAAAGTTTGAATAAAACCAAACGTCAGCGTGAACTTCTTCGAGTAACACA
CGAAAATCAGGTAGCGTTAGAAGCCTTTTATCTTCAAAAGTCTAACTAgc
tgttgtttttctctttttgattAACAGGATTAACTGATTTTTTTGAGTAA
AATTATTATCACTAATGTTACAATTTATACGAAGGgccattttcttttga
aaatgaacagaatttttttaaaaacgttttgaaTGAAACATTTTCTCCTT
TTCTGTTACAGGCTATATTGAAAAGAATAACATCGAAAGAACCACATTTG
AACCATTTACATTGGGTAAGTAACTGTTATCGTCTAAAAAGTAATGAGGA
TCAACTAACGCGTCTCGATTATTTCGAAATGCATGTAAGAGATATGTGAT
GATTGGATAAAATTTTAAATGGATTTCTCACGTCTCGCGTTTCATTTATT
TTGGTTTATGTGAAATAGATGCTCACAAACAGAACAAGATTTGAGCGTCT
GTTACATTCatcaattcaaaaataattaattttctttctcCCGATGGAAC
TGATCCAATTAGATTAGATTGTCGAGGACATGCTTATTTAAATAGGCTGC
CCTTAAATTGCCCtgtgattgaaaaaaaactcaCAATGAAATTACAGCTG
ATCTCCGTAATTTAAAATGATTCCTGATTTTAACTCTGTTGGGGCAGAGA
CAATGAACGGAAATATTTTCGCGATTCGCGGAAATTTAGTTACCGTGAAG
TTGTATATACACTCAAGGTACCTTTAAAAGTTTTCTCATGAAAAAGGCTG
CTACTTTAGGCgtggtcgaaaaatcgcgaatttgaggaaaaaatgttttt
cgcgagcataaactttcgcgaatcgttggataaaaataagaatttgtATG
AAAATTTCCTTAAAAGTGAATATTATTCGATAAGTCCGATAAAAACGGTT
GCTCCTCAATTTCAAAAAGGCATTAAATATGCCGAAAATTTAATATTAAT
TACGATATTTATTATTGATTTCCaactttttgagaatttttcacGATAAA
CTTTCGTGGAttgccctgttaagaattttcaaagacatttactttcgcga
aaaaggtcaaaattcgcgaaaatcgcgaaagttggtacgcctaaagtaag
cctcaaataaaaatagattttggaAATTGTTGGATTTTctggataaaaaa
aattcaagttttaTGAATTTAGGAGGAAGAATGGAAAGCTAACCAACGAT
ACATGGATAATATCGCAAAATATCCCAAGGATTGGTATGAAGCTATCGTT
CGAAAGACCAAACCCAAGAAGAAGAGCACCTCAATGCAAGACAAAGATGA
TAAATCAGATGAAGAGAATGACAACAATGAACATCTACCCTCTATCAACA
ATTAAAGCCACTTTTTTCTTAACAAATGaacaattcttttttctaatatt
ttgataaattttgttatctttttgtttttaatgaagtaattttatattaa
tattttatttaacaaaataaatagATTTAGTTATATGTAAATTGTTTTGA
CTATACAATAAATGAAAATGGTTTGactaaaaatctataaaaatttAATA
TAAAATTGAGTATAAAATGGTATGAAAATaagtatataaaaataaagatg
ttgaaatcaaccctttgagtgccaatgtcgtatatatcagacatgggcta
tgtaggagggcgaagcccaaAACATTATTCGGTTGTATGGAAAACTTCTT
TCGAACCCGCGGACGGGGAGcgtggagtaaggtttataacgCACTCTTAA
CTGAGAAGACAAGTAGttagagacattcgagttatagaggttggAGTTAA
AGTAAAGTTTCCACTATATATTAGCTCGTGGCCAGAGCCGAGTTAACTCT
CTATAAAATTTCGATGGGTAAATATAAGCACTTCTACAATCAATCAATGA
ATAACGGTCGCAANTCGATAAGTCCGATAAAAACGGTTGCTCCTCAATTT
CAAAAAGGCATTAAATATGCCGAAAATTTAATATTAATTACGATATTTAT
TATTGATTTCCaactttttgagaatttttcacGATAAACTTTCGTGGAtt
gccctgttaagaattttcaaagacatttactttcgcgaaaaaggtcaaaa
ttcgcgaaaatcgcgaaagttggtacgcctaaagtaagcctcaaataaaa
atagattttggaAATTGTTGGATTTTctggataaaaaaaattcaagtttt
aTGAATTTAGGAGGAAGAATGGAAAGCTAACCAACGATACATGGATAATA
TCGCAAAATATCCCAAGGATTGGTATGAAGCTATCNCTATCCAACGCTAT
ccaacgagcttctaactccttctagatccggagatataagcctttaaagt
tcgaactagcgattttttttaaacttaaaaaaatgaccgtggcacttaaa
gggttaagaaatattctttatTCTCTAAAAGATGATAAGCGTTCACAACA
ATCGTCGTGTCTATACTGTAATGTAAGTATAGATAAGTTTCAATCATCGC
TGCTCTCGCTCACCAATTGACTAAGTTCTGCAGCACTGTACCCCAACAAC
ATCTTCAGATCACAAACAAACTGATAAACGAAGCGCTTACCACACACTTT
GTGTATCAAGTCGCCATCGTAGTAATACCTCAAGGCTCGACTCAATTTTT
CGTAGTTCATGGAGGGTTTGTTTTTGCGTTCACCCCATAACTGAGCAACT
CGTTCAGGGTCAACCAATTTGAAAGCACCTTCTTCGCCCACCCACATAAT
TATGTCTTTCATGTTTTTCTCTGTTAACAGCTCCAATAAGAATTGCCACA
GTTGTATTTGCCCACTGCCCGGTGATGCTAAAAATGATAGATGAAAGTTT
CATAGTAGGTGCTCCACAGAGTgcagtttttattgaaaaaagtttctcat
AACAAAACATTATTCGGTTGTATGGAAAACTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050376TCONS_00050376Clytia hemisphaericatranscript
TCONS_00050377TCONS_00050377Clytia hemisphaericatranscript
TCONS_00050378TCONS_00050378Clytia hemisphaericatranscript
TCONS_00050379TCONS_00050379Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050376-proteinTCONS_00050376-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:78175..88756 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
C17orf105uncharacterized protein C17orf105 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.68	3.27	3.69	3.58	859.13	646.13	426.44	443.82	259.89	240.34	145.17	225.65	3.04	2.56	2.83	3.24	12.37	8.69	3.72	5.09	15.29	15.17	23.39	24.91	76.19	47.87	131.99	151.2	14.81	7.62