XLOC_030157 (gene) - C. hemisphaerica

Overview
NameXLOC_030157
Unique NameXLOC_030157
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_126:28083..38491-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030157 ID=XLOC_030157|Name=XLOC_030157|organism=Clytia hemisphaerica|type=gene|length=10409bp|location=Sequence derived from alignment at scaffold_126:28083..38491- (Clytia hemisphaerica)
TTTAGTATGGGACAATGGAATCAGAAGAGATTGTATTCCCAAGATTAGAA CGAGCCAAATTGACTGAAGGTGCTGATAGCCAGGTACAGATAAACTTTGT CTACATTTTCACTCTGATCAGGGGGAGGCATACAATTACTATATGAACGC TATGACACATTAGTACCGTGATGGCATATATAGAAAAAATTGCGAAACGA ACAGTTAGTACACGATAAAATTTGAAAAGGGAGCATTTTTTTTGAGAATG GTTGAAGTAATTTTTCAAATTTTGTTGCAAATTTCGGCAGTGATTCTCTT TTACCTCAATTTTATATACCTAGGATCACATTAATATTTATTTGATACAA TCAAATATATCAAATTTTTTTCAAAGTTTCCAAAGAAAAGGTGATTTCCC CACTCTTATACCTAATAATTGTCAATATTGGAGTTTGGGGGTAGTGCCGG GATTGTTAAGGTCATAAACAGTTAATACATTGGGTAGTGACGAAATGGGG GGTGGCATCTGATGAATATATCAAAATTTTAATACACACAGTGTAAGATA GTTACTGCATGCCCCCCCCTTCTCTGATCAAGTTTAAAGAAGAATTTAAT ATCATCTTGGTCCATTACAGATATAAAATAAACACAATGTTATATGCTAA CTGCATCATGCCTTTTCTGACTAAACGCTAACTAATTTTACAATAAAATT AAATCTAAAAATTTGGCTTACAGATTTCACAAAAATCATGTTTTGTGCGT AACTTATTATTTCAAAATGTCTTTACATTTAAGGAATCTTCCAAATTAAC CACCTCGTCTGCTAAAAGTAATGACGTCCTATTTGAGGTAAGATCTTTAT TTTCATCACCCTTTACTTCATATGAAAAAGACCACTGATTTACCTTAAGG GAACTAAATTTAATCATTTTGAATTGCAAAACAAGTTTCTAAGTTTCTTT TTCACTGTTTCTGGTTCTTTTTTACGAGATTTCGTAATATTAGGTTCCTT CAAATATTGTCTAACCGCAAAATTAAATAAATATTGATAAAATTAGTGGA CCGTAAAAACTAATTCCACAAAAAAAATATATTTTGTGATCCGCAAAAAC TAGTTCCCGCAAAAATCAGTTCCCTTAACAGCAAGTTGGAATTCGTGGAA ACTCTACAAAAGCTGTTGGAAAGCCTTTGAAACCAGTTTTGCTGGAAATC TCTAGGCAAATTTGACCCCTGAAAACCATTTTTTGTCGAATTAACTCTTT CGGTACCATGGCAAACTCAAATTTGACATTTTTTTTCTTTTTGCAATTAC CAAACTTTGAAGCCAATTATCTCAAGAACCAGAAGGGCTAAACAGGTCAA GTTTGAGTTCGTTGGAAAGCTCTTCTCAAGAGCTATCTTTTCAGTGTGCC GGATTTCTGATTTAGGCCCTTAATCAGAGCTGCCGGCAGCCGAAAGTGAT CGTACATATATGAACGAATTTTGGCTGGGTGGTACTGAAAGAGTTAAGGA TCATTTATTTCATTTTTCATATTTGGATCATTTTTTTCTCAAGGATTGTC CGGAAACACCAGCAAAAATTATCAGAAAGATTGTTCTCCCACAGGTAACT TTTTTCATCTTCATATTCATAAATGGGATTTTTTGAATTGTATTAAATTT TTTTAAATATTTTTATGTACTTTTTTAATGTACTTTTTTACAAAAAAGAA AAAAACTTGATGAACCTTTTTGTTAATTATTCATATTAACAATGAAGTGA AAATGAAACAAATGAAATACCTTTAACAACGTAGTAGGTATTATATTAGC TACTATCACTTGGTAAAAATATAACTATTGACACAGTTATGGACGACTAA ACTTTATTTCAGATTTCATGTAAAAAAGATTTACTGTAAAACTTTTTTCT TTACAGGTTGGTTGCATATCGCCTGTTTCTGTGTTAAAAGTAAGTTTTAC CTTTTTTTATACAAATGAACCCTCTCTATTTGTTGTTTTTACAAAGAAGA CCATCATAATTTGCTTCTCCCCCTACCCCTCTGACTAAGAATCGAAAATA ACAATAAAGCCAAATAAAAATCTAGGATGAAGAGAACACATTCACAAAAA TCATGTTCTGTGCGTAACTTCTTATTCTAATTGTCTTTAAGGAATCTTCC AAATTAACCACCTCATCTGGCAAAAGTAATGAGGTAAGATTTAATTACTT TATTTACATCAATCTTTACTTCATATGAAAAAGGGCCACTGATTTATTTG GATCATTTTTTTCTCAAGGATTGTCCGAAGACACCGTCAAAGGATAGCAG AAAGTTAACTCTCCCGCAGGTAACTTCTTTGTTTTCTTTTTTTATAAAAT ATGATTATTGGTATTGTATACTANTCTCAAGGATTGTCCGGAAACACCAG CAAAAATTATCAGAAAGATTGTTCTCCCACAGGTAACTTTTTTCATCTTC ATATTCATAAATGGGATTTTTTGAATTGTATTAAATTTTTTTAAATATTT TTATGTACTTTTTTAATGTACTTTTTTACAAAAAAGAAAAAAACTTGATG AACCTTTTTGTTAATTATTCATATTAACAATGAAGTGAAAATGAAACAAA TGAAATACCTTTAACAACGTAGTAGGTATTATATTAGCTACTATCACTTG GTAAAAATATAACTATTGACACAGTTATGGACGACTAAACTTTATTTCAG ATTTCATGTAAAAAAGATTTACTGTAAAACTTTTTTCTTTACAGGTTGGT TGCATATCGCCTGTTTCTGTGTTAAAAGTAAGTTTTACCTTTTTTTATAC AAATGAACCCTCTCTATTTGTTGTTTTTACAAAGAAGACCATCATAATTT GCTTCTCCCCCTACCCCTCTGACTAAGAATCGAAAATAACAATAAAGCCA AATAAAAATCTAGGATGAAGAGAACACATTCACAAAAATCATGTTCTGTG CGTAACTTCTTATTCTAATTGTCTTTAAGGAATCTTCCAAATTAACCACC TCATCTGGCAAAAGTAATGAGGTAAGATTTAATTACTTTATTTACATCAA TCTTTACTTCATATGAAAAAGGGCCACTGATTTATTTGGATCATTTTTTT CTCAAGGATTGTCCGAAGACACCGTCAAAGGATAGCAGAAAGTTAACTCT CCCGCAGGTAACTTCTTTGTTTTCTTTTTTTATAAAATATGATTATTGGT ATTGTATACTAAAATCTTTTATATCTTTATGTACTTTTTTATAACGAAGT TTACAATGTGATTCATGTTGTTTAATAAATATTAAGATTTTAAAGAATTT AACTTCTAAGGGGATTGAAATAAATGAAAAGTGAAGGGCAAAACGAGGGA CGGGGAAATTAAGAGGGTTTGCAGCTGGCTGCGAATATAAAAAATGTAAT AAATGATAGTGATTTGTAAGAACTTAATGACAAAAAACATACGCCGTAGC ATACTCTCGGGTACCTAATAAGCGTCCCCCCCGCTAATTAATTTTTTCGA AAATTTTCCACCCAGGACATTGTTATTCCAACCCCCCCTGCTTATTAATT TTTAGAAAAACATTTTTGAAAGTTCGTTTTTTTTCCCTGATTCTTCTGTA TTAGACTGCTTTTCAAAACTTTTCCACCCAGGACATTTTTATTCCAACCC CCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNCTTTCCCCCCCCCCCCC CCCCCGTCTATTAGGTACCCGAGAGTAAGGCTAGAGAGACTGAACAAATA CATTCTATTTATATTGTCAGAATTCAACAAAAGTAGATTTCAAAATGAAT ATGAGAATAACTCATCACCCTTCAAAGGATGTTATTGAGTTGGAGCCTAC ACAACCTGATGTGAGTTCTATTGTTTTTTGATCAATTCAAACATAATTTA AATTTCTTAATGTTTTCAGCTTTATCTAGTACACGCTTTTTTAAAAGAAC CAGTGAATTTCAGTTGAGGCTTACTGTTCTTAAGAATTTCTTGATTTTAA GGCTGAAATGTTCTTATTCTGTTCTAAGCCTAAAGTCGATCGTTTCCTTT CTTTCTTACCTTTCATAATTCATATTGGAATAGATCAGTAAAAAATGACC AAATTCAACGTCAGAAAGGAATTTGATCAGAGTCTACCCACTAATTACTG ATTTATCCATAACTAAATCATAAAACATCCTTCTTCTAAGGAATTTGAGA ACTTGCTCTATTGTTCTTAAGTTGGTCTTAAGTTCATAAAATCTTTCTTA TAAACTAAACTTTTCTTCTACCAATGTTTTCAATAGGACCCTTATGATTT CATTGATGAAGAATCCATTAAAAACGACTCTGGCTTACACGGGGATTTTC CTACATTCTCAGATACAGATAATGAAAACACGAATGTATGTATCAAATTT CACTGTGTAATTTTCCAAATGACTACTCTCGAGCCTCTTATAAACGTGCA GTTACGTCTATTAATTTTGACAACAATTTTTGAAGTACAGTTTAGCTTAC AAGACTAAGTAGCCATCATTAATATTTTGGAATTAATCTACTCGTCAAAA GAATACAATTTAATCCGTTTTTGCTCCTATTGATCATTGGAAATTTTCTT AAATACAATCAATAAGTCTGGTTTTCATCCCTGTATGTTTACTCCCTCCT GTATGTTTATTCGAGACCCGAGAGTAACAAAAGTCATGCAAACAGCCGCT TTATTTGCTAAATTAAAATTTATGTTTTAGCATAGAAATCAATTCTCTTT CTCTTGCGTAAAAATGAATATTAATCTTTTCAAAACACTGGAAAACAAAG AAATATTTTGATTAGAAATCGAAATCGAGCTTGAATATTATTATAGGTAG TAAGTACAAACAAGAAGTCTCATTTAGTAGTTATTTCTAGAATGAGTTCT TCCTTTTGGAATTTAACTGTACTCGTTGTTTGCACGAATATTTCCACCAT TTTAGGAAAGCAGCGAGGAAGAAGACGATCCGGTCAAAGACCCTTCATTG AAGAATTGAAAATTGAAGGAAGAAGAAGTAAAATCTAAGGAAGAAGAAGA AACAAAATCTAAGGAAGAAGAAGACACAAAATCGACGGATGACGAGGAAG AAGATAGAAAACTGCAGGACCCAGCCAGCTCAAAAAATGGTAAAGGAAAG AGGAAAAGATCGGCAGAAGAAGAAGAACACGAGGAAGATGATGACATAAC GACGATTATTGTTTGCACGGCCAACAACGGAAAAGGACGTCGAAAATGGG ACAAAAACCAATCTTGTGTCTTCTGTTCCGTGAAGAGAAGAAAAATTGAT AGACATCTCAGAGACGTTCACTCCGAAGAATCGGAAGTTGCTGAAATTTT GGCTATAAAATACGATCGTACCGATTCCGTAAAACTAAGAAAGAAGAAAA AGCGACTACGAAAGATTGGCTGGAATAGACTTAGAAAAAAGGGAAACTTC CTTCATAATAATGAAGTGCTCAAAAATGGTCGCGGATTTTTCATACCTGA AAAGCGACCTACCAAAGACCAGAGCCACACCAATTATTTATTTTGTGAAT TTTGTCTTGCGGCATATAGCAAAAGGGATCTGAGAAAACACCTCAAAAGA TGCACCGAGAAACCGACTGGCTACATTGTTGGTAAAAGAGTTCAATCATC GGCAAGCATGTTTATGTTTACGCCACCGTCAGCATCAGACTCACTCAAAA ACGTCATGGAGAGAATGATTGTGGATGATGTTTCTCGATGTGTCAAAAGC GATTCATTGATCATTGAATACGGAAACAAGATGTGTCTAAGGTTGAGGAT GGAAGGTGACCAACAACATCATATCAGTAATAAAATGAGGGAATTGGCTC GACTTGTCATCGAGACCAGGAAATGCTGTGACCAAGTCTCCTCTCTACAA GATGTCCTTATGCCAAAGAATTTCAATTTTGTGATTGAAGCCGTGACAGA ATTGGCAGGATGGAACGAAGATGAAGGCTGCATGGAAACTCCCTCAATTG GTATCAAACTTGGGCATTCTCTTAAAAGGTGCTCCTTGATTTTGAAGGCA AGAGGAATAAGAGAAAACATCCATTCCTTAAAGAAGCAGGCAGATGAGTT TTGTGAACTCGTGAAACTCTCGTGGAACGACGAAATCTCACGTCTTGCAC GAACAGAGCTATACCGGAGAAAGTGGAATAAGCCAAAGCTGTTACCATTA ACCTCTGACCTTCAAATTTTGGGAAATCATTTAAAAGAAACGATTACAAC ATCGCTGAATGCTCTTGCCAATGACAACAATGACACTGCCAGTTATCGTG ATTTGGAAACATCCCTTCTAGCAAATATTATATTATTTAACAGAAGAAGA TCCGGAGAGCCTGCCAAAATGGAAGTAGCAAACTTTAAGACATTAACTGA AAAAGAAAATCCCATGAACGACGAAGTTAAAGAAAGCCTTACTGAATTTG AAAGAAAACTATGTACGACATAGAATTGAACTGCGTGGAAAGCGTGGCCG GAAAGTGCCAGTTCTCTTAACAAGAGAAGTCTTAAAAGGAATTGATGTTC TGCTCAATCTTCGAAAACAAATTGGTATCCATGTCGAAAATCCGTATATC TTTGCTGTTACCTCTAATGGGTCTCTAAAATATGTTCGGGGAGCTGATGC GGTCAGAAAACATGTACGAATTTGCCATTTAAAGTGTCCAGAAGCAATAT ATTCAACAAATCTTCGTAAGCATGTAGCGACGATGTCACAGATTTTGAAC TTAGAAAAAAATGAGATCGAAATGCTTGCTACATTTATGGGTCATGACAT CGAGATTCACAGAAGATATTACCGACTACCAGAAAATGCCCTGCAGCTCG CAAAATGTGGGAAATTAATGATGTTGATGGAGAAAGGTGGCATTGGCAAA CTTCATGGTAAATCACTGGATGATGTAGAATTAGATTTGGAAGGTATTTC ATTTTTCTTTTTTTTTCTTTTCTTTTTTAATTTCTAACTAGCTTTGAAGT TAGGAGAGAACATTTCAAAGGCTGTCCTCGGAATGAGCCATTGTAACCAA TTTAAGCTTATATCTTTATTTGGCAAGTCTGAGTAAAAATTGAAAAATTA CTGGAAAACTTTGTAAATAGTGGGAGTTTCGGTACCATAGAGGGTCACTT TTTCACGTTTTTGGTAAAAACTTGAAAATTAGTACTCAAACTACTCAAAA ATTAGTTCCACGTAGGGTCGATTTTCCTTGTACTCTCCACCCCGGACCCG ATGCATGTTCCATTGGTGAAATAAAAAACAAAACTTGGTTCAGTTCTTTG ATTTATCATACTTCGCATTATTCACAGGAAAAACTTAATAGATCACAAGC TTTGTGAAATGTCGTTTCCAGATTTGGGAATAGGTGGGTTTCCCAAACTA ATCACAAGGTTGGGATCCTGCAACTNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNAAGAAAACCCAATGTTCACAATATC CCAAACTTTATTTCACAAACTAAATTTTGAAAATCCGATTTTTAAGGGCC GGAAACGACGTTTCACGAACTTGTGATCTGCTAATTTTTTCCTGTGATTT TTAAGGGAAAAAATTTCTACAGTAGCTCTACCACTTTTTACATAGTTTCG TTAATCAATAATATCTGCGTACAGTTTTCATAGAATTTGAATTGATACAG CCCTTTTTACAACGTGACGTTTGATGAAATAAACAGATATTTATCACAAG AGTCACTTTTATATCAATTTATATATATCAATTTATATTGACATATAAAC ATGATAATTCTTTCTTTCACTCTGTTCTCTTTTCTTACTAAAGTTTCGAC ATGAAAATTGCTAAAAAATTAATTGGGTAAGATGAAAAACCATTTTGACA AAACGATTCTATATAATTTTTTTATCTTCACAGAGTCGATACTATATTAC TTGTATTTCCCTTTAGAAACTGTTGATGTACCCAATCCGAGAGATGGAGA AGGTGAAGAAGGTGGGGGTACAATTCAGATGCTTGAAGGTATCATTACTC GTCACTTATTTGCGTGCATAACAAAATTTGCTAGAAATGATGCAGTATTT ATTTATGGAGAATGATTTTTACATATAAAATATTGAACTTGATTGCATTA AAATGATTGTCTTTTGCTGCCTTTTGAACTTGATTTGGCCCAATCAAAAT TGCAAGAAAACTTGAAAATTTGCTTAACTTTAATCATGTTAACATTCACC TAAAGAATTCGTCATTTGTTATAAGAGCGACCCACACATACTAAATATTG TAATTATAAGAATTTTACAAACTACTTCTATTTTCTTCGTAAGTATTTGC AAATCATTGTTAAAAGTTTTGTTCATTTCACAGATGTAGAAGATTCGGAT GCAGACTCGGATGACTGGAATAGTGACGCGGATGAACCAAAACAAAAAGC AAGGAAAAGAAACGCAAAACGAAACAGGAGAACGTCAGCGCAACAAAAAT CTACGAGAACGAAAGGTAAAGTCTGTCTCAATATAATTACCAGTGGAGGC ATGCTCAAAGATTTCTCAGCGAGTAATTTTCACTTCATAGATTATACACT TAATTAAGTCTGTTTCAACGTAATTGGCAGTGGAAGCATCTCTAAGTATT TCTCAACGAATATTTTTCATCAAACGTAAATCTGAAAATGAAAATGAAAA ATGAAGAAGAAAAAGAACTTTCCATCCTTTGGTGCTGGAAACTTCATTTT TATTACAGAGGGTACTTTGAACCTTGCCGATTTCAAATATATGATTATTC TTCTCATAGCTATATTAGTTTAAAAGTTACATATTAGGAGCGACCCACAC TAATGGAGCTTCAAGTATTGTCATTCTAGGAATTTTTCAAATTATTTCTA TTTTCTTTTAAAGTATATTGGCCAACTATTTTTGAAACTTTTGTTTACTT TACAGATTTAGATGCAGATTCGGATGACTCGGTTAGTGACGCGGATGAAC CAAAATGGAACCAGAAAAAGCCAGCAAAACAAACCAAAAGAAAAGCCTCC AAAGGTAGTTATTTAATTTCCCCTAGGGACTTTTGTTACTTCATGTAAAG GACGTGCTAGCTAGACAAATCTTGTTGATGTTTTCTTCCAAAATAAGTAG TTTATTAGCTCGTATCTATGGAAAGCAAGAAGTGACAATTCTTTCTTAAA CAACGAAATCTATGCTTTTTTAATCTTAGCTGTCTGTTGTAGCATGGGTA TAAGCTTAGCGGTGCTAATATTTTTTTTCTCTGTTTTACAGGCAAAACCT GGTCGAATGACGAGAAAGAAGCTGTCAGAAGACGGCTTAAAGATTTTTTT AAACTTAAGAAAGTGCCACGACAAGGTGACATTCAACCGTGGCTAAAAGA TGAACCAGCTTTGAAGAATCGTGATTGGAAAGCCGTGAAATTTCATGTCA ATTGGGCTATTATTGCTGAAAAAAGACAACTAGCGAAACAAAACACAAAA AAAAGATAATTAATCCTCAATCATTTTATTATATTAAGGTGGGTCATCAC CTTCAGAATTAATTTTTCATGTTTTTAAGTATTCCGTCGATAACTCTTGA TGACGTAACATTTAGACAAAATTTCACTTGAAAAACTAGTATTGGCTAAC TACTACCTACTTGATAAAAAAATACAGCCCTTAAAAGCTATAAAATAAGT CGATATGGGACCAACTATCCGATAAAATTTTTGAGTGAGATGGAAGCATC TTTTTTTAGCTAGGATATATGATCATGCTTTTTCTTTGTATATATAGTTT TCTATTTTTACCTCTTTATCTTCCCAAGGGGGGGGGCAAGGAAGATATTG TGCGAGGAGATAACTAACATGAATGACTCCAGTGGAGTCCATGACAGATG TTGAATTCTATTATTTTTGTTATGTCTTCCTCGTGTCGTGGGGTTGATAT TTTTTTCCTCAAACATTTTACTGGGAAATGACAATACCTACTAAAATATT AACCAATCAGGATCAAGATTTTTCCAGCGGGGAAGGGTAGAATTTTAAGT ATATTTTCCAACAGGACAGTTTAATGGACTTATTTTCCAGTCTGTAAAAT AGGGTTGGTTTTTATTTTCGATAGCTTTATTTTCAGTAAATTTTGCCTTA GATAGTTCTCAATCTCTTCTTAGGTTTTGACTTACGGGGCCACTGTTTTA CACATGCCGACCCACTTGTATATAGCACATAGCCTACATGAAATATATCT CAGGGTCAACGGACTCATTCTGTCTCCAATTCTTGTCTACCGGCCACTAA TATTGGTTTCATTGATGAGATGTTTAATGTGAATAAAATTTATGGAAGGC AAATATAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047341TCONS_00047341Clytia hemisphaericatranscript
TCONS_00047340TCONS_00047340Clytia hemisphaericatranscript
TCONS_00047339TCONS_00047339Clytia hemisphaericatranscript
TCONS_00047338TCONS_00047338Clytia hemisphaericatranscript
TCONS_00047337TCONS_00047337Clytia hemisphaericatranscript
TCONS_00047336TCONS_00047336Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047337-proteinTCONS_00047337-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_126supercontigscaffold_126:28083..38491 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.02 0.04 0.02 15.07 14.55 13.47 16.5 8.42 7.05 7.55 7.16 3.08 3.41 0 0.01 0 0.02 0.05 0.02 0.02 0.03 0 0 1.73 6.02 0.09 0.06 0.02 0.02