XLOC_029964 (gene) - C. hemisphaerica

Overview
NameXLOC_029964
Unique NameXLOC_029964
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_119:51209..58264+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029964 ID=XLOC_029964|Name=XLOC_029964|organism=Clytia hemisphaerica|type=gene|length=7056bp|location=Sequence derived from alignment at scaffold_119:51209..58264+ (Clytia hemisphaerica)
CGCGTCGCCGAATTctcattaaaatttaaaatacgtTCTTAaacgaagaa agaaaaagaattcaGATAAACCCACTGCTTGACAATTTTCTTTGTCTTAG CTCTTCCCGCAATACCACCACTTTCATCTCTTTGATTCTTTCCCTCGGTT AAGGGTAAGCAGTCATCATCGGCTGACTTTTTGTGGCGTTTTGTAAGTTT ACCGATATGATGACCCTTTCCTTGACCGATCCTTCTCCTCGCGACCCGCG TAgccgaattttcattaaaatttaaaatacagTCTTAAACgaagaatgaa aaagaattcagataaacaaagcaaaaaatagACAGAAATTGAAAACGTGA CTCTTTATTTAATTTAAGGTAATCGATATCATCAAATTGTACAACAAAAT TTATGGGCCCGGGTCCACCaccatcatcatcgtcatcacCATCATCATTT CTTCTTCTCCTCTTGCTTTGGTCGTGTTCTTCCTCGTTATCTCTCCAGTA GTTTAATAACTTTTCAGCCAACACCGCTTTCACCCCTTTGCACGATAGGT TTCGTCTTCTTAGCTCTTCCCACAATTCCACCACTTTCATCTCTTTGATT CTTCCCTCGGTTAAGGGTAAGCAGTCATCATCAGCTGACCTTTTGTGGCG TTTTGTAAGTTTACCGATATGATGATCCTTTCCTTAACCGATCCTTCTCT TCGCTCCATATTCTACGACTTCTGCCACATAAAACTTCTGCCACTTCTTC TTCTGCCacgtctttttcttttttgtcttttttgtcttACTATTTGGAAA TCTATGACTGGATCATCAATCTGTAATTTCGAAGTCAATGTGGCCAATGT GATGAGTCTATAAAGTAATGAGAAAAATCTGCAGATAACAAATGGAgagt ttcattgaaaagtttgtatattttctaaataaaaCAGATAATAAATTACA ACAAACAATGGGAGAATGCCTGGCAAAGACTTCCTATCTTTACTAAAAGG CGAATCGGGTACATGTTTGCCTTCGAAAGCAACAGTGTCCCTTCCTGAGT GGTTTTTTAAAACAGCTTTTGTTATGGAATTCCAAGGAGTGATTgttata atacaaaaataaatcagcaactttaaaaggaaaatcaaaACTAGAGGACG AGGGTTTTGTTTTTGAGCACAAGGTAAAAAGAGTGCGTGATGTATACAAC AACATTTATTTGGGaggaaatttttgtaaaaaataccTGCTCGTCCAATT CCGCCTCCTCGAAGATTGTGCTTGAAAAATAGAATTTGGAATATGAGTTT TGATTAAGTATTTTCTCGCTGTAATAAATTATATAATAAGACCCAATGGG TCTACCTTTTTGCGACGAcgggatccgttgattcattaccaATAAATGAT ACGCATATGATTTCACACATGAAAAACTTATCAGCTAGTCCATGGTTTTC ACTGTTTTTGAGGTGCAAtcatatcttttgattgaaactcccccttctca cagaaccgGAAGGATTTTTCTAATCAGTGGGGGGGGGGAGAcaggactga aatttgattgggatgaaagtttttcttgttttaaataACGGGGATTTTAG TTCTATTATTTTATTGCTTAAAACATTAGGTTTATGAAATATattaatat tttgcagtgaggactCAAATatttagttgttttttttttcaatgggacaa aaattgaaggaCTTCTTTCCGTCGGAGACGGccgaattttccagtgggag gggTGCCCCAGTGGgtatgtgagaagggggtgtttgtACTGAATAAAGAT TTTTGAACGAATTTCTCGCAGTTATGATATTAAAATTTCATTCGAGTGAA AATATTCTATAAGATCCTCATTTTTCTTTctccattttcatcttcatctt ctaattttcatcaaaagacTTTATTCGTTAAAATTATTCCACTTGCAAAT GTCTTtccaataaaaataaaaaatttattatgattgaataattctttaat aaggcaaaagaagaaaaaaaaagaatctatACTTAATTCTTTGAGATTGA AGCAATCCATAAACGGGTTACGAGGAAAAAATTATGTATTCTTATTAGCA TTTTAATTTATTCAAAGAAGAACTTACATTTGCCGAAGCAGGTTGAAAGT CGTATGTTTGCTGAGGAATAAGAAAAGGTTTTATGTAAGTCAGTTTAACA AAAGAAAGCAAATTATTCCACTCATTACTATTTTTCCTATTCTTTGAGAT TGAAGCAATTCATAGACAAGTTACGAGATGAAAAGGATGCATTCTAAATA GCGTTTTAATTAATTTGAAGAGAATTTCAACTTTCAGTTGATGTTTCAGC TTCTCGATCGTCGTGAGCATGCTGaggaataaaaaatttattaatctact gtttaataaaaaaaaaattcatcacaAATTATTCCACTCGTCGTTGAGGA GAATTTCAACTTACAGTTGATGTTGACACTTGTACGTCGTGAGTTTGAGT TGATGTGTTCGACACTTGTACGCACTTGTACATTTTCAGAAGAAGGTTGA TCGTCGTAGGTTCGAGTTGGAGCTTCTTGATCGTCGTTAACGTTAGTTTG CCGAGgaataaaaaaaaggttttaagtcagtttaacaataaaaaacattt atcaTAAATCATTGCACTCGTTGTCGATTTTCCAATTCTTCGAGATTGAA GCAATTTATAGACAAATTACGAGGAAAAAAGGATGCATTCTTACTAGCAT TTTAAttaattaaagaaaatttcaacttacAGTTGATGTTTCAACTTCTT GATCGTCGTTAGTTTGCTGAGGAAtaaaagaaaatgagaaaaaaattgat ccTAATGAGAGAAAATATGACTCACTGAGAGTAAAAGATGAAATTAGAAA CGAAAATATCTAAGGCTGTAAAAGAGCTGAAAGCCTGCAAGAAACCGACC TGTGGGCCACCTATCCCCTACGGGATAGAATATGTCAATAATCAAACAAa actaaatgaaaaaataaaactaaaagaaaatgaaaaaaaaaattgatctt aTTGAGGGAAAATATGACTCACTGAGAGTAAAAGATGAAATTAGAAACGA AAATATCTAAGGCTGTAAAAGAGCTGAAAGCCTGCAAGAAACCGACCTGT GGGCCACCTATCCCCTACGGGATAGAATATGTCAATAATCAAACAAaact aaatgaaaaaataaaactaaaagaaaatgaaaaaaaaattgatcttaTTG AGGGAAAATATGACTCACTGAGAGTAAAAGATGAAATTAGAAACGAAAAT ATCTAAGGCTGTAAAAGAACTGAAAGCCTGCAAGAAATCGAGCTGTGGGC CACCTATCCCCTACGGGATAGAATATGTCAATAATCAAACAAaactaaat gaaaaaataaaactaaaaaaaaagaaaaaaaattgatcctAGTGAGAGAA AATAAGACTCACTGAGAGTAAAAGATGAAATTAGAAACGAAAATATCTAA GGCTGTAAAAGAACTGACAGCCTGCAAGAAACCGAGCTGTGGGCCACCTA CAATTTGGGCCATAAACTGTAcgaaattgaatgaaaaacctttaaaactg aAATCTTTATTTTACTTTACCTATGTAAAACAGAAGAATACCAAATAGGA ACGAgaagaataatttcaataaccTGAGGtcaaacaaaaccaaacataaG CCTACGGAACAGAACACTAAATGAAACAGCAGAAACTCACCAACTCACGC AACCAACAGCAAACAACGTTTGAAAACGATCTCAAATTTGAAGTGCAAGA AATTGAACTGTTAGGGTCAGCAACAAGCAACAAAGGTTAATGTCACAAGA AGTTTGTATTTACCTTAATGTTTTGATTCAAAAAACGACGTTGACGTTTA CGTTATACTGCaactgaataaagaaaaaaaagaaattcatacaATATTTG ACAAAGGGTAGGGGAAAGAATATGTCAATAATCGAAACAAaactaaatga aaaaataaaactaaaaaaaaaatgaaaaaaaattgatcctAGTGAGAGAA AATAAGACTCACTGAGAGAAAAAGATGAAATTAGAAACGAAAATATCTAA GGCTGTAAAAGAACTGACAGCCTGCAAGAAACCGAGCTGTGGGCCACCTA CAATTTGGGCCATAAACTGTAcgaaattgaatgaaaaacctttaaaactg aAATCTTTATTTTACTTTACCTATGTAAAACAGAAGAATACCAAATAGGA ACGAgaagaataatttcaataaccTGAGGtcaaacaaaaccaaacataaG CCTACGGAACAGAACAAATGAAACAGCAGAAACTCACCAACTCACGCAAC CAACAGCAAACAACGTTTGAAAACGATCTCAAATTTGAAGTGCACGAAAT TGAACTGTTAGGGTCAGCAACAAGCAACAAAGGTTAATGTCACAAGAAGT TTGTATTTACCTTAATGTTTTGATTCAAAAAACGACGTTGACGTTTACGT TATACTGCaactgaataaagaaaaaaaagaaattcatacaATATTTGACA AAGGGTAGGGGAAAGAATATGTCAATAATCGAAACAAaactaaatgaaaa aataaaactaaaaaaaaaatgaaaaaaaattgatcctAGTGAGAGAAAAT AAGACTCACTGAGAGTAAAAGATGAAATTAGAAACGAAAATATCTAAGGC TGTAAAAGAACTGAAAGCCTGCAAGAAACCGAGCTGTGGGCCACCTACAA TTTGGGCCATAAACTGTAcgaaattgaatgaaaaacctttaaaactgaAA TCTTTATTTTACTTTACCTATGTAAAACAGAAGAATACCAAATAGGAACG AgaagaataatttcaataaccTGAGGtcaaacaaaaccaaacataaGCCT ACGGAACAGAACACTAAATGAAACAGCAGAAACTCACCAACTCACGCAAC CAACAGCAAACAACGTTTGAAAACGATCTCAAATTTGAAGTGCAAGAAAT TGAACTGTTAGGGTCAGCAACAAGCAACAAAGGTTAATGTCACAAGAAGT TTGTATTTACCTTAATGTTTTGATTCAAAAAACGACGTTGACGTTTACGT TATACTGCaactgaataaagaaaaaaaagaaattcatacaATATTTGACA AAGGGTAGGGGAAAGAATATGTCAATAATCGAAACAAaactaaatgaaaa aataaaactaaaaaaaaaatgaaaaaaaattgatcctAGTGAGAGAAAAT ATGACTCGCTGAGAGTGAAAGATGAAATTATAATTAAAATATCTAAGGCT GTAAAAGAACAAAAGGTCGCCGAAATAAGTGATCAGAGGCGTCTTTTTGC ACCCTTTGTATTTCGATGCACCTTTGAAAAACCTCCGCAATGGGGGGGGG GTAGGCATTTGAGGCATAAGATTAACCTGAGGTCAAACTGTCAAACAAAA GCTAAACATAAGCCGGTGGAAAAGAATAAATGAAACAGCAGAAACTCACC AACTGTTAGGGTCAGCAACAAGCAACAAACGCAAAATCTCAAATCTGAAA GCCTGAAAGAAACGgaacttaaaaataaaaagaaataatttatcTTAGTA TAAATGTCATTTGAGTATATCATCAtgtaaaaaacaacaaaataccTTCC ACGAAGTAGTGTTACGCAATCAATTAAAATTCAATCTAAATCAAAAGTGA CTGGCCACCTTGCCTCCACTGCAGATTGGTTTATAagttgatttttgaaa acgtttgaaGCATGAATCGTATTCAATTGAAGTAACTTCTTTGCATTGAA TGCAACTTCTTCTTAAATCCCCCCTATTTTAAAAACCAAATTATTACTTT TAGAACAAACCTGGATTGCAGCTCCTCAAGCTTTCTCCGTCTCCACTGAA ATGCACTGAAAATTATTGCCTATTATTGCCgtaaaaaggctttttttttt tAGCTGTACTTCTTGCATCATACATTtcctttaaaaaagtttttttttgg gtttgaatttgaaaaagaattgtTAATATACTATATCTTGTAATTTTGTC GAATTTtgatacagtatatggcccccaaaacagagacggcccccaaaacg taggtctTCATTAAAATTAGGATTCTGACCTGTAaatttatcagaattag acgatttttgtctattttaaaagaatgatagtcatacttaaaaatgagca tatttttgatggtttgagactgTTTCAaaataatacacgctttttttata agaacacactttataagaatgcctGTGATGAAAATGgcgaaaaaattaag aataatgctaagaatatcggcaccatcatggaattttgctactcaagcta agaatgacattttaaagaccattttcaattataaattatcagTTATCCCC AAGTTAGGCCTAAGTTGGCTCACtgcttttacaaaagtgccattttatgc ttgagacgtacgTACTAAAATGTTAAATCATGGTTAAATCTATTAGGAAT TAGGAtgctaacctaagaatgtgctgtaagaatattttaggatgattttc ccaaaaacgtTAAGAACATCCATGACGAAAtgaatttacaccattcttat aaaaaaaaacgtgtatatttgcgtctaaaggaaatatttcaacacaaaaa ttagataaaaattgcatataactcactctagctccttgaatagtgaaaat aagttatgaaaatggggtataggaaactttctacacctaatgcctttcag aaaatgcagatacaacTGACTTtagtaaaagatatagcatcttaaaggtc aaccagtattttggggccctaaaatcagcattgataaaaccagAAATTCT ATATAAtgagaaacaacaaaaaatcttggaattccattcctatcagcttg agttaatagtttataacaaaaaattaacattataaaaatgttcgctgaat cagcaaaaacggcagattctgtcatttttttgcaaaatataggagaaaaa tacctttaaagcttaatattttcagtttcagttaagctgtttttctaaag atttca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046964TCONS_00046964Clytia hemisphaericatranscript
TCONS_00046965TCONS_00046965Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_119supercontigscaffold_119:51209..58264 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.2 0.23 0.41 0.5 0.75 0.66 1.07 1.51 0.54 1.21 0.81 1.01 1.61 1.17 0.2 0.23 0.24 0.2 0.14 0.33 0.62 0.54 0.27 0.28 1.19 1.37 0.46 0.5 0.39 0.28