XLOC_029485 (gene) - C. hemisphaerica

Overview
NameXLOC_029485
Unique NameXLOC_029485
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_106:190286..196062-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029485 ID=XLOC_029485|Name=XLOC_029485|organism=Clytia hemisphaerica|type=gene|length=5777bp|location=Sequence derived from alignment at scaffold_106:190286..196062- (Clytia hemisphaerica)
TGTCCATGTGATAGATGATGACTTTTTTGTTTATTGTTTATTTGTAGAGA GTGAACAACAGCTAAACCGTCGTATACCAAAAGTACGGTTCATTTCAGCC TCTCACGTAGATTTGCGAAGTGAAATGACATTTGAACAAGTCTCTAGAGA TTACATCATGCGAAAGGCTAGATTTGCCCATTCTGATATGTCGCTGTCAT CACAAGAAATGGAAGCCGGTACAGTAGTATTTCAAAATCCTGTTTCAAGT CAAGATATTCACCTTGAAGAGCAAACTTTGGAAGATTGTAAGTTCATACC TTTTCAATACCTTCAAAAGAAGAATTTATGAAGGCCACAACTTTAATTAG AAGTATTAAATTTAAGCTGTAGGATGTCAATTAATAGGTAACTGGGCAAC GAACAATAGAGACACTTTTGGTATCACACCTCCTCAATATATAATTTTTG GTCGGCTTCGTAAATGTTGTTCATTTGGAGCAGCTGTGCAAATTAATTTG TTTTTTGTCCCAGGCCGAAACACAATTTTGAGACAGGTTAGGCTGGCTTT CTCGGAACTCGAATTTTAGTGGGATCCTATTGTTTTGCCCTGATCCCAAA CTAACGTTTATGTTATCTGAGTGTTGAACCTTTAGCTTCAATAAAATGTC CTTGTGGTCGTTTAGCCTACATATAGTTTCATGGTCTTACATGGTCTTTT CTGATGTAAAAATGTGTAATTCTTTTGCTAATATCGACCTCTAGGTGAAT CGACGAGTTTAATAGATGCTGAAAAGATCTCGGCTTCTAAGCTACAAGGA TTGGACGGTGTGACATATCTTCCACGCTGCGTGAAATACATAGCCTGGGC GCTATGTTTTTCGGTCATTGTTGTGGCTGGTTTCTTCACCTTACTTTATG GATTAAGTTTCGGCAAGAATGACCAAGAAAAATGGCTTTTCGCTTTCTTT GTTTCGGTTTTCGCGGATATTTGCATCAATCAACCTATAAAGGTATATTT TCATTTTATTATATAGGCCCAGTAGTGTACTTTAGGCGTACAAACTTTCG CAAGCAGAAAATTTCGCGAGGTCGAAAAATTTACTTTCGCGAGTTTGACT TTAAAAAGGCATTTTTGAATCCAAAATTTTTGAAGCCTTAAGATGTTCTT AACTATTTGAGTTTTTAGCTTAAAATTTTCTCAACATGTTCTTATTTTCA CCATTCTGTGAGAATTTTTGCCCATTTTCTTAAGAACTTGGCCATTTTCC GTAAAGCTTTGGAATGTTAACATGTTCTTGACATTTTGCCCATCGATCCT TATGTTCTTATATAGTTTGTTCTTATTTAAAAAACGTGTACTATATATTA TGTTTTTTGACAAATTTTTATCTTTTAAACCCTTTGTTCTTTTTTAAGAT AAGTAAACCAAAGCACGTAGCAGATGCCTTCAGTCTTGTAATAATTGGGA TAGGTGGAAGAAAATCTTAATAAAAAAGAAGTTGGAAAAAAATTCCCCGG GTTGAAAAATACTTTCATAGAACAGAAAATTTAGTGAAAGAACCCTTATT GATTGTCTTAGAGTTGGACAGTCTAACCTATTGTTCCTTAATTTTTTCCA CTCTTCAGGTCCTATTACTCGCAAGCGTTCTGACGCTTATCTTCCGCGAA CTAAACGACGAATTAATTCTAACAGAAATACACAACTATCGTAATATTGA TTTTGGAGATGATAGAAATTCCTTTCACAAACTGAGTCAATCTGCTGAAA CACCAGACGCCCAACCTAAACGCCCCGAACCGCCCTCAAAGGAATATATT GAAGAGATGAGAAGGCAGCGATTGTATGAGCAAAAGATGATTAATATAGT GATTGAAATTTTCACTTATACTTTCTACATACTCTTATGTTTACTGATCA CGTATGGACACCGCGATCCAGGAGCTTTCCAAATGACGACCAACATTGAG CATATTTTCTACACCGGAAAATTTGAAAAGGTTTATTCTCATAGTTTTTT CTTTTTGTAAGGGAAAGGCATACGAAAATCAGCTCGTTATACGCCTGTCT CAAGTATCAATTCGAGATATTAAAACAGCTGGTGTTTTAAAAAAATACGA TATTGATACTTAAGCACAGGAAATAAGTAGTTTCGAATTATACATAGAAG ATTCAACTCTACCTTTCGGTTATACCTTATTGGTAAGGTCTAAAGGAGTA TTAGACTTTCAAAAATTTCTCCCATATGGGCTATTCTTTTTGATAGACCA TAGGTCATCTAGCTCTTGAAATGTCTTTGTATACATTTCATAAGCAACCA GGCTGCTAAGGCTCGAGCCCTTGAATTATACAAAATGTTTTTACTATCTC GTAAAGTAAAAGCTTACCCTTTACCTAATAATCATGAATATTGTATAATA TCAGGAGTGGTCGAAGCTTTTTTTTGAAAATGATCTAAAATGCTGACCCG AAAATTAGAATTACTTTAAAAAAAGTTTGTAACGTCTAACGTTTTCCTTT TTTTAAGGTTGACTCTATACCAAAGTTTTGGGATTGGTCACAAAATGTGT TTAGTGATGGATTATTTAATGATTACTGGTACAATGGAGAGATGACACGA CGTAAAGGCTTCCTTGCTGACGGTACATCTTATCTACTTGGTAAAGCACG ATTACGACAGATCCGAGTTAAAGAAGGTAAAAATGGGAAACTCCTTTATA TCTTGCCAACCATATATACTTATATTCATAATATGCACCATTACAATTTC TTCAACGGATCCATAGCTGATTGGTTGAAAGTGAAGTTTTGACTGATTTT ATGTCACTTACAACCAATCAGTTATTGGGTCCGTAATGTAATATCAGAAG ATATTGCAGTGGTGCATATTATGAATAGGCTGCTGGCATCCACTAACGGA TTCGTGCTCCTTATACTACCTGGGGTTTTGTAGATTTTGCGATTCAGACT AATACTTATACGATTGCTTGAGTTTTTGTTTGTAAATACACCAAAATAAC CCGCCACCGTGGATATTTTCAGGTCGTATAAATAGAGTGTACTCGACTAA ACTAAGGTGGTTTGTTGAAACGTGTAGATGTTCAGCAAAAATTTACCGCA TCTTATAAGAAAGCTAATACATGTTTTTTTAATAAGCATAACGCTTATAA GCATATGAAGGCTCAGATTTGTAGAATTCCTAAGCATATAATAAGCATAT GTGTCAGCTTGAAATAATTTTCAAGTTGTCATTTTTTAACAGTTTTAAAG GTTTGGTAGTTTGGTAAAAAAAAGACATTCCACGGCTACCACTGCTCCCA AAATCTGAACAAATTTTTACAAAATTTCTGAAATTTCACTAAAAACTTTG GCTCGGGGTGAATTATAAGCATGATTCATAAGCATATAATAAGCATAATC AATGCCTGGATGCTTTGAGAAATAAGCATATACAAGCCTGACCAAGGGGC ATACACTTGCTTATAAAAAAAACATGTATCGCTCTACTGTACTATATGAT GCGAGTAATTATGTGAATAATGTGTTTACCTTTCAGAGAGGTGTATAACG CATGGTATGTTTGGTTTAAACGAAACGAACTGTGGTGGACATTACGATGA AGATATTGAAGCTAGTTCTTTCATTTTCAATAATGGCAGCAATAATGGCA GCAGTCAGAATGGTTATCAACAATTTTGGAATCATAATGAAAGTAAGGGT GTTTACCCATCGATTATTTCACAAATTTAGTACACATATCACGCTATATA CAAAATACATCGAATGAAGCTACTTAACATTTTCCACATGGGCCATCAAA TAGCTATTTTTGTGTGGTAAGGACCAGCTGGGTCCGATCATAGTGGGTAG TTAAGACGAAGCTGCTAAAACATTAAGGTTCCCTTCCGTATGGAAACAAA ATGATCCCATTTTTTTCGGCTTAAATTAACTTAACCACTGAAGGTAGCTA CTTCTAGCTATGGAAAAAAAAAGGAACCGCAATTTATTTCTCTCACTTAT ACAAGTCTTAATTTTTTTAGACGATGGTGATTTCAGTAGTGTATACGACG TTTCCGGACGAATAGCGACGTATCCAGGAAGTGGATTTTCCGTTGATCTT GGCAAATCTAAGAGAGAAACGGACAAAATACTCGAGTACTTGCAGACAAA TCAATGGTTAGATGAATTCACCAGGGCTGTATTGATCGATTTCACCGTAT ACAATACACAATCAAATTTCTACTGCATTGTGTTGTTCCTTATGGAAGTT CCTGCTAATGGTGGTGCTTTTGTTTACAAGAGAATCTTAAGCGTTCGTTT GGATCGATATTCTACAGATTTTGCTGTTTTCTTGGCAGTCTGTGAATTCT CATTCTTGTTCTTAACCATATATTATGTGGTCCGTGAAATCAAGAAGTTG AGAATAATGCGTATGCAGTATTTCAAACATTGGGAAAACTGGGTTGAAAT CATTAGTTTTGGTCTAATCTTGACTTCATTTTGTCTGCTCATGATTCGGC TTGGTATTGTCAGCGAAATCAAAAGTTCATACTTCAATGCACCCGATAGG TTCATCAACTTTGATCCAGCTGCTTTGAGTGATCAATTCTACGGTGTTAC CTTAGCATGTCTATCATTCATTTTATTCATCAAATTCCTGAAGCTGTTAC GATTTAACCAGAAAATATCTTTGATGTTTCGCACCGTTGCATGTGCTTCA GAAGATACTAAGAACTTTTCTATAAGCTTCTTGGTCATTACCTCAGCATT TTCTCAGTTCGCTTATCTATCCTTCATGGCCGTACTGGCTGATTACTCGA CCATTCTCTACACCATAAAATCCTTATTCAACATGATGCTTGGTGGAGGA AGTTTCGAAAAGCTCACGGATGCATCACCGATCAAAGGCAAAATCTTCTT CCTGGCTTATTTCAGTTTTATGGCTTTCATTCTACTTAATATGTTCATTT CGATCATCAATGACGCGTTTGCAATCGTCCAAGAAGCCTTACACCAGAAG AGAAACAGTTACGAATTGATCGACTTTCTTACACAACGTATTAAATCTTT CTTGCCGTATTCATTGACTCGTAGGAAATCGAAACCAGCCCAACGAGATG AAAAGACTGTAGAAATACCTTCACCTGAATCGGAGGCTAAAGAAGTTGGA GTTAATGCTGCGATTGAGGCATTTATCAAGGGCAAACTTTTAAAAGAAAC CCCCGATTTAGAAGCGTCTAAAAATGCTAAATCAGTTACAATTGCGGGTG CAGTCGAAGCTACTTGTGAAGATCAGTCTTCAAAGGAGAAGCCATCCCCG GAGACGGATGGAAAGCCTTTCAAGGTTGAACATCGAAGATCATCAGAATC TAGGAGACGTGATCGTTCAACGAGAAAGAGATTCTTACATTGTAAAGAAC GCATCGATCGGCTTGAGGCTACATTACAATCACTAGACTGTGCTGTTGAT CGATTGGTTGAACGAGTAGAGACTGAATGTCGCGAAGAGGAGGCTGAAGA AAGAGTCTGGAGATCTATTTTAGTTTTGGCATATTCCAAGTATTCGAATC ACGACAGTTTAAGATTATAAAATTGAAATTTTAAAAACATTATCTACTTG TCAGTAAATATCATACTTTATTTTTACGTTCCATTTCCACAGACCGTTCC ACGATATTTACTTATTCGATATTTATTTTCAAGAAAGAAGTTTTGTACGA TTTCCTAGAAATTTTTGTATTCCTTAGCGATTTTCCTATAATTTTAGAAA GAATCTATTCCATTTGGTCAATGTGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046158TCONS_00046158Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046158-proteinTCONS_00046158-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_106supercontigscaffold_106:190286..196062 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.94 0.71 0.4 0.24 3.82 2.82 2.44 2.87 2.08 2.17 2.57 2.46 1.09 1.08 2.07 3 1.98 1.92 1.82 1.45 1.58 2.09 1.52 2.35 7.3 7.06 1.35 0.88 1.42 1.13