XLOC_029424 (gene) - C. hemisphaerica

Overview
NameXLOC_029424
Unique NameXLOC_029424
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_105:677664..687711-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029424 ID=XLOC_029424|Name=XLOC_029424|organism=Clytia hemisphaerica|type=gene|length=10048bp|location=Sequence derived from alignment at scaffold_105:677664..687711- (Clytia hemisphaerica)
GGAAAAAGGAAAACATGACGTAGCCTACCATTGATGAGTTGATTTTATTG
TTGAGCAAGACCAGAACAAATTTAGAAAAATTTGAAATCAAGAAATTGGC
AAATCCTCACCTTTGAAATGTCGAACACGATGTGAGTGAGGTCTTTCAAC
GTGTTTGACGAAAAACCAAATAAATTATTTGAAGAAACTAGATAGAAGTT
CATAAAAGTTTCAGTGCAGCAAATTCTGTTATGCTTGGTTCAATGGACAG
AAGTTATAATCAAACGCATCACCACATCTGAGTAACAGGAAACTTTAAAT
TCTTTTTAGACAAAATTCAATCAATATAAACATGATAGGCGATGAACCTT
GAAACACTTTCTTCTTTCTTTCTCTTTTTTTTTTGCCATTGGAATTTTTC
CTAATTAATCCCTAAAAAATCTTGATGACCTTTAATTCGTTTTTTTCTAT
AAGAATGACGAGGCTCTTAAACGACAAAAAACCCTCAGCCTGGAATTAAC
AATTTGAGGATTATAGTATTATACTCTGAATTGCCTGGGGCATTTATTTA
ATTTTGTCACTGTTAGAAGTATTATAGAGGGTCATTTATCCATTGGGGGC
GGTTAAAAGAATTTTCAGGATTTCGGTATGCCTTCAAGAAATCAATTTCT
GAAAAAATTAAACTTCCTTTTTGTCTAGACGCTGTTTATCAAAAAATATT
GCAAATGTTAGTTGGTAGTTATAAACTGTACTAAGAGGAAGTCAAAATGT
GCGAAATTTTATTTATGATTTTTCATTTTGATGCTTCGTTGATCTTTCAT
CTCTATTGGTTTTCTTTATCATTTATAATATAAATTCAAACTGAAAATTT
GCTCACTTTCACAAAGACTTTTTTCGGCCAAAAGGTGAAGACTTCAGGTG
AGGATTATAGTTTATATGTTTTGCATTCCCAGCTGGCACACAACGTTGTT
TTAACGTTCATATAACGTTATATGGACGTTGTGAACGTTAGAAAAACGTT
GAAACAACGTTATGTGATAGCTGGGTTGTCAGAGGGAGGGAACTTTTGAA
ACTCATTAGTTTTGTGCCTCACTAATGTATGATACTGATTTCCCCAATGA
GATGTAGCCGAAAGGTATAGTCGAATCTCCTTTGTAGGATTTGAAGTCAT
ATCTTATTCTATATATAAGCTGCACAGCCCACGCGTGGTTTTCATACAAA
CGCTAGATTGGAAGTAAACTTTACCGCGTCAGAACTCGTAAAATGTAAAA
TGCAAAATGTAAAATGGCTTCACTTTTGTATTTCTGGGAAATGTTGAAGA
TTCCTCACTAGCATTCGGCTATATCTCATTGTATTTCATACTGATACTCT
TTAGAGGGACTGCGAATCGGCCTCAAGACCCCAGGGAGGGGCACTCGATT
TGAAAACGACCATATGAGCGGCTCAAAATAAAGTCTTAGAAATTAAACCC
ATATACAGTGCAGGAAAATTTGGATATCTCTGGACGGGGCTTCAGAAGTC
CGACACTTTCTTGTCCGAAAAAAAAGTCCAACAAGGCAATAGATTGCGCT
TCAGTTTTGGCACAATTTCAAAATGGTTTCAAAATTATATTCGTCGATGG
GGTGGGGGGGGGGGAGGTTTTGCTGACTTGCTGTTTTTTTTGTTTTTGTT
TTTGAGGGGGGGCTTCCTGTCTTACATTGGGTTAGCCATAAGACATAAAG
AGACTCTGAAGATCAAAGACCATGCGACAATATTTTCGGACGAAAAAGCA
GTCAGAGGAGACAGACTTCCGGGCTGATTCAATTTCGTCTGCATTCGGAC
TGTTTTGTTGTCGGACTAGAAAGTGTCGGACTAGAAAGTGTCGGACCAGA
AAGTGTCGGACTAGTGAGATGTACCCCTCATGACATACATTTCAGATAAA
CATGGCAATATTTACTTTACAAATTTAGAGAAGATAAAACTCTTATGTTT
TTTATTACCATATCGCGAGATTTCAAAGAAAGCCTAAATGTTGAACAAAC
TTTGAGAAAATGAGACATCAGGTCGCTAATACGTCTCTTTATAATTTTTC
AGGTGTGAAAAAATGAATGGTTTTTGTTTAACTCTTCTTTTGGCGATAAC
GGCATGGCGACACGTCACGACGTCATCAGAGTACGACATTTACGACGAAA
GAGACGAGGAACAAGATAAGGGATTAGAATATGAGGCGATGGGAATTTGT
GCTTCTTTGGCAAGATGCAAGACGAAGGCTCATGTCTGTTTTACTGAGGT
AAGAACAGCTGTAATCAGAGCCATTAAATTTTGTCAACAGTCTTTTGTCA
ACTGTTCTGATATTTTCGTCCTTTTTTAGATCTAAAGTATGTCTTAAAAA
AGCGAGTCAACAACTTTAACGTAAAAGTATACAACATGGAAAAAATATTT
CACAATAATTTTTATATCGTTAGATAGGATTTTAATTTCTCTTTCCGAAA
ATATAATATTTACTTTTAAACAAAAAATATTACGCTTAAAATTCAAGATT
TTCAGTTATTGATATGTTCTTAATGCCTTAACGATCAATTAACTCGAGAT
ATCAAAAGAAAAACCGGTTTGATTACTACTTGTTTTTTTAGATTTTAAAA
TTGCAGAAGAGTTGTTAAGTTGCGATTTTTATACTATTGTGATGCTCGTG
AAATTGCGAATCTAAAAAAGTAAAATTTGTTAAAATTGCGTTAATATTTA
GAAACAGTTAAACATTAGCACATCACGTCAAAAAGTTATAAGAAAATGTT
CCTATAAAAAGTGTTCACTTTAGAAAAGGTTTTAATTGATGATTAAGAAG
CCACTGGAGGGTATCGGACCGAAATACAGTTAATACTCGCTTTTTTGATA
ACAATTTCGGACAAATTTTATATTTTCAGAAAGTTTAGTAAGAGATCTTT
CGAATGGTGTAAAAATTACTACAAATGATTAAAAATTAAAAAAAGTAAAG
CACTTTGAAGTTGCTGACCCGCTTTTTTTAAGACATAATGGCTGCGTTTA
GGCCAACTGGCATTTGTAATTTGGCATTTGTAATTTGGCATTTGCTCATG
AGGGATTCGATTTTAATAGCTTTTTCATTGTATTTTCTGTCATGGCATTT
AAGGAATCGTCTTTTTAGAGTCATTGGCTGCGTTTAGACCAACTGGGATT
TGTAATTTGGCATTTGCCCATGAGGGATTCGATTGTAATAGCTTTCCCTT
CATATTTTCTGTCATGGCATTTAAGGTATCGTCTTTTTAGAGTCATTGGC
TGCGTTTAGACCAACTGGGATTTGTAATTTGGCATTTGCCCATGAGGGAT
TCGATTGTAATAGCTTTCCCTTCATATTTTCTGTCATGGCATTTAAGGTA
TCGTCTTTTTAGAGTCATTGGCTGCGTTTAGACCAACTGGGATTTGTAAT
TTGGCATTTGCCCATGAGGGATTCGATTGTAATAGCTTTCCCTTCATATT
TTCTGTCATGGCATTTAAGGTATCGTCTTTTTAGAGTCATTACTGAAAAG
GTGATTCCCTCAAGTTCAACTTTGACAGATCAAACAATGAAAAGCATGAA
ATTTCTCAAAAACTGCAGTCATTAAGACTGAAACTTTTTGCCGTAGGGCT
AGGCTATGGCAAATTTTGCAAATTTTACAATCTATAGAAAGAACTGAATA
AAAAACGTGCAAATAGTTTAAAAAATCAAAAATGACATTTTTGATTTTTT
AAACTATTTGCACGTTTTTTATTCAGTTCTTTCTATAGATTGTAAAATTT
GCAAGATTTGCCATAGCCTAGCCCTACGGCAAAAAGTTTCAGTCTTAATG
ACTGCAGTTTTTGAGAAATTTCATGCTTTTCATTGTTTGATCTGTCAAAG
TTGAACTTGAGGGAATCACCTTTTCAGTAATGACTCTAAAAAGACGATTC
CTTAAATGCCATGACAGAAAATACAATGGGAAAGCTATTACAATCGAATC
CCTCATGAGCAAATGCCAAATTACAAATGCCAGTTGGTCTAAACGCAGCC
ATTGGCTGCGTTTAGACCAGCCTGGCATTTGTAATTGCTTGCAGTATTCT
TTTGAATTCTATTGTTCCGCGCAATTGTTCGGTTTGTCAAATGCCTAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAACTGAGGCTGGGCATGTTCTTAAGATGT
TCTTAATTTTTCGACGAATTTCAGCCTATATGTTCTTATAAACTAGGTTC
TAATAAAAAAAAAAACGTGTATGAGTAGAAAGTTTTATGTGCGTGTTCAC
AAAATTGTATTTTAAGCTGTCCCTCTTTTTTCTTTGTCATTACGATTAAT
TTATAGGTTGTAACTACCTTTTGTGACAAGCCTGTGTGATGGAGAACGTT
CTTATGTTTTAGCGATAACACACACAAACTTTTCTACTCAATCGCATGTT
CAAACTCGATACTTTAATTAGGGACACCCTGTATAGTCCGTCTAGTTTCA
TCTGGATAATGATTTTTTTCGAGTGCTTCATTTTCATTGTTTTTAATAAT
CGAAGAAGACGTTCAGCTGCTAAAAAGTCGTTAACTATTATCCAGATGAT
CGTGGATGGACAGGACTATGGGTGGGTTTACATCTGTAGGAAAGAATCGA
TTAACACTCCTTTTGTCGATAACAATTCAGACATAAAAGAAACAAAAGCT
CAAAATCACATTTAAGAATTATTTTATGCCCCCCCCCCAGCGGTTTGCGT
GAATGCGTGAATGGGCATTTTGGGTTGCGTGAATCCGTGAAAATTTAAAA
AAAAAATGCGTGAATGCGTGAATTGAAAAAACTTGCGTAAACGTGAAAAT
CCACTTTTTCATTGCGTGAATGCGTGAATCTGGGCTATTTTGTGCGAGAA
TACGTGAATCCACCGATTTTGTGCAGTTTTCCCGATTTTCCAATGTTTCC
CCGATTTTTCCCGAACATTTTCCGATTTTCTGAAAAATTGGGTTATTGCA
TGAAACTCGGGGAAATTTGCGTGAATGCGTGAATTTCTAAAAAAATTGCG
TGATTGCGTGAATTGAGGATCCGCTGGGGGGGCCTCTTTTATAAACGTAA
TCGATCTTCCCCTCGTTAAGGCCTTTGTTTCAAGAGGTGGGCATGGGCAT
CTCTTAAGACAAAGGGCTTAACGAAGAGAAGATCAATTAATATTTACAAA
GGGATCTTGTAAACGATTTTACAATTAATTTTAAATAAATAGAAAATTGG
AGCATGAATATTTGTTTATGAAAAGTGCGCAAATGATTTTTTTCAATCAA
ATTGAACTGTGCAGCGTGAACTTTTATGTATAGATCGAAAAGTTTTTTTG
AACCAATGAGAAAACTGGGACCAAAGGGAAAATCAATAATAACTTAAAAA
ATCCTGATGAAATAAAAACAAATCGTGCTATTTCAATTGTATTTCTTAAT
CGATTCTCTCCTAGATGTAAACCCACCCTATACTTCTTAACCCTATTCAT
ACTAGGCTTTTAGGGGCGGTTCAGAACTAGGGGGGGGCTTTTCCTGTACC
ACCCCTTAACTTTTGATCTAGTGGGTCTTTTTGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTTAGGAATTTACAGAAAATTTCACGGCAAAAGCTCTA
TTATTTCAGGAGCTATTACCAATAGTTTGACTTCCGAACAGAAAGAGCCC
CCCCCTAGTACGAATAGGGTAAGGATGTCTTAAGATAATTTGCAGCTGAG
ACAAAAAAGGGCTGTAACCTTTGATAGAATTAGAATTAGATAGTGCTTTT
GTACTTGTTGAAAAGATAATCAGGAGTGGAATATTATCAAATAGAAAAAA
ATCGAAAAGGATCGGAAAATAATTGATGAGAAATGAATTCTTGAATAAGT
ACGATATAATTATCATATTCACAATAGTAATTCTTTGATCTTATAACATC
ATCACTGTGAAAAAGAGATAGCCCAGGGTGTTTTTCCACTGAAGGCTTAA
GCTAAAGAGGATTAACGAAACTTATAATAAAACGATGAATAGCCCAAACT
ATTCATATAATTCACGGATGAAAAGAGATGGTTGCACGTTAATTTTTTCA
TTTCAGAAAAATATTGTATTTCTTAAAGCAACATAGGAGAAAAATCGTTA
AATCTTTTGTTTTTTTGCACGTATTTTCTAATCCACTAGAACTTGATTGA
GGGCATGTTTAAGAGAATAAAAGAGTGAGGATAAGCAGATCAGGAAATGC
AAAAAAAAATTCAATTTTCTTCTGGTTGCTGTGGGAAATGAAATTATTTT
TTTCAAAAGAAAACATAAACGTGTAACCATCTCTTTTCATCCACAATTTA
TATGAATAGTTTTTGGCTATTCAGCGTTTTATTACATGTTTCGTTAGCCC
TGTTAGCTTAAGCCGTCGGTGGAAAAACACCCCCAAAGTTTATCACTGAT
GACTTTAAAAATCATCAAAAACTACAAAGAAAGAGGCCTTTTTAGTCAGC
CAGACAACTGAAAAGGAATTTTCACAGAGATGACGCTCTAAGATTAAACC
CAACGAACCCAAACATTTTATAAGCCAGAAGGTTTTAAGCTGAATGTGTT
TAAAGTAGGTAAGAGATGTTAACTTTAGTATTTTATCTTACTTTTTGTAG
GGAAATAGCTGTGATCACGTCTGTCACCGCCGTGGGAGTGCCCTCAACGC
CCGTAACGTCATGCGGGCGGATTTCTATCAGTACGAACCGGCGCGCTACA
GAGATGCACCTGAAGGAACCTCTCCCAGAGAAATGTACGATTATATGATT
CTTAAAGGCCCCAGCGTGGCTGACACTTACCAAGGAGCCGTCTACAAATC
AGACACCGTAAGCACCATTGAAAATTTAAGGTCCAAATATGGCCATAAGT
TTTGTGATTCAACCTGTGAGTCAAAACTTCGGCAAGGATGCACCAAAGCT
GGTATCTTAAGAAACGTAAAGAATTGGTGTTTGACTGCTTTGGATTGGCT
GGGTAATATTCCGGACCTTGAAGGACCGTCGTCTTACGTCTTAAAAGTCG
CTATGGATGTGTTAAAATCCAGAAATCTAGATCTGACAGAAGGAGCTTTC
GTAGCTGCTGCCGCTACTTCTGCTTTTTTGACAGCGGACTGGTGGGGAAG
CGGAGATACCCGGTTTGCAGACGAGTTCGGTTTTGCTGTTCAACATTCTC
TCTGGTTGGCTATCTTTGCCGGTCGCTTAAGAATCACTCTGCAACCTAAA
TTTCCACTACCCTTAACGCAAGTTGGCTCCAGCATTTCGTGTGATCTTCA
AGCAGCAGAAAATTTCGAATTGGAGACTGGGTCAGTATACGCAAGTCTTT
GCACGTTTTTGGACCAGAACACCCATATGCGATTTCGACCGGAAATTCAC
ACGCGGAACTCAGTCGGATGTGTGGAAAAAACGACAGGGATGGTTTATAT
ACGAGTTGGTGATTGGGTGAAATCGGGCGCCAAAACGAGTTGTATTGGAG
GAGCATTTAACAAGTATGGCATCACATTTTACGATTCAAACGAATTAACC
CCTGTTGAAGTGACCATACATGGTACAACTTTGTTTCCACCCTCCATCAA
AGAAAGCTTAAAAGATATGCGGACGACGCAATGCACTACTGCGAAAGGAA
ATGGGCCGAATGAAAAAGGTATTCTGGGTAAATGTGGATTGCAAACTGTT
GGAGGCATTTGCAACTGGTTTCCAGTATGGTAAACATGGCAGACTTTAAT
ATGGTAGATTTGACTAACTTATAAACTATTGGGCAAACCCCCTGAAATGA
TGACCAACTATCTTTCATTTTTAGATATGTTATAGAGCAGCTAATTCTGA
GAAGAAAGGTTGCAAAAAAATCAAAATTGTCGCAATTAAGTTTTATTCCA
AAATGAAACACCAATGTCAATAAATTTTTGACGTCACTTTTTCGAATGTA
CAACCGAACTACAAAAAGGGCCCTGGGATCGTTTCCTGAGAAAAAAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046075TCONS_00046075Clytia hemisphaericatranscript
TCONS_00046074TCONS_00046074Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046074-proteinTCONS_00046074-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_105supercontigscaffold_105:677664..687711 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.49	1.94	1.64	1.41	3.95	3.48	4.32	3.5	1.78	2.35	5.98	3.21	3.85	3.79	19.91	26.65	1.56	2.15	2.83	2.82	1.19	1.61	1.73	1.47	12.68	7.35	0.91	0.75	0.54	0.63