XLOC_029401 (gene) - C. hemisphaerica

Overview


Name	XLOC_029401
Unique Name	XLOC_029401
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_105:547413..555692+

gene from alignment at scaffold_105:547413..555692+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_029401 ID=XLOC_029401|Name=XLOC_029401|organism=Clytia hemisphaerica|type=gene|length=8280bp|location=Sequence derived from alignment at scaffold_105:547413..555692+ (Clytia hemisphaerica)
ATACCACCACCCACACCCACCCGCCCTGCACCCATCCCTGTGGTGACGTC
ACAAGAGGACGAAGTTGTGCCCATCAAAGGAATGAAGAAGGCTATGGTGA
AGTCAATGGAACAATCTTTGAGGATACCTCATTTTGGTTATTGTGATGAG
ATTGACGTCACTGAACTCATtgagtaaatattttttatgtttgcCATGAA
TTTTGCCTTTTGTAtcacaatgaagtgaatacagtcgctctcgtgttgtc
ttctgaccagccaccagaaccatTGGAAAGCCAATGGATCCGGCGAGACt
caaactcacaaccatgcAATTCGCGGAcatttgctctaccattgagctac
gggtTCATCTGGAACCTGAAGACTCAAGTGCCACTCCTCGGTAGATTTGG
GAGTGAATTTTTGCCTACTGACTTGGCAGAGACTTAAATTTCTTATGTTT
CATTAAGCCGTTGTCCTTTTGATTTTAGATGTTTTTAGATCATACTTCCA
CAAACGAGAACATTTCTTTGACAACATGAAATTGATATGACTTTGAAAAG
AACATTTCTaattccagggggtaatccTAAAGTCCAGCTGGTCTAAGAGA
AGTTCTAAGGTTAAAAGACAGTAAAAGGCTAATATAAGTTTTTCCTCCCT
TAAAGGTGTGAAGAAGAATGTTCCAagggttttttttggcaaattttgtc
cACACATTGTTAAGAATtatttttggcttgaaaaggttcgtccaaccCCT
GCATTGATGTTAAATGAAACAGGCCATTTTCTGAATCGAATCactttcta
ttttattttatctctCACCTTAGAATCCAACGCTCATTGCGCCCGCTTTG
TATGGAACGCGGAGTGAAGTTATCCTTCATGCCTTTCTTCTTGAAAGCTG
CTTCCATGGCTTTGACGGAATTCCCCATGTTGAATGGCTCTTTTGATGAA
GAAAATATGGCTATGGTTTATAAGGTATATTGTTTTTCACATAAGGAAAG
ATGCTCAGTAACATGATGAACCAAATAAGGGgcgaattttttaaatatat
gatttagctctgtaaaaaaatattgacgATCTTACTCACACAAAGTGCCT
CGTGATTAGATTGATTAAACGTATCACTAATAGACATAGTAGATATGGTT
ACCACCCCTCTTTTGACCCCTTTTGTGTCAAAACTGATATAAACTCCTTG
AGTTTCTTTCCACTCTGAATTTATATTTCCAGAACGTATAAAATTTTTAC
TGCTTCTAACCTGAAACTATTTCTGCCAGCTTCATCAGTATTGCTGGCCA
TCGCTGGCCGTCATCCTTTGAAATAAGATCTCTGTGTAAAACAGACGATA
ACCCACCCTCCACAGTTCGTGATCAAACATGGCTGTACTCAGCCTTATAT
TGGTTCATATACAGAAATGTGCGTTTTCTAGAGTGCTTAAGACTATTAAG
AGACCATACATGGTCTATATGCTCTATATATGCTGTACTATATGCGGTAC
ATATACCATAGATGGTATATGTACCGCAAAACCCACACTAAATTTCTGac
ctaaataattattttttgggcTGCCTTTATCAAGAAAATTGTTTGATGGT
GCGAGGAGTCCCATGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGATAAGTTTGACAGAG
CAGTAGCATGTATACAAGAAGAAATCCCTCCATCAACATATACATCGACT
CCAGACTCACTCATCATGTCTCCTTCTGACAAAATAAAAGCTTCTCGTGA
TTATTGGAAGGCTAAATTTGACCAGGCTTAGTCCCTGATAAGGGAGATGG
CAGAAAGAAGCATCCAACTGGAGGAaattcctggccttctgacaataaaa
aaggttaagccaaatgaagaaaagaaagCAACCACAAGTACAAGGGTGAC
TCAGGTACACGACTCAATGAGGGCTAAAGATGTAGCAACCAACCAAGGTC
AAATAAATCAGGGATGAGAAACTGAAGAAggaaactgaaaaagaagaagc
aaAGAAGAAGAGAGAGGAGATCAGAGAAACATTCATCAAATGCAAAATTT
AATGTATCTGTGTACAACAAAAATGCTTGGCTTTGGGATTAAAGCAGTTC
CCAGTATGTCTATGTTCTTCGTTCAGTTTGCAGCAAAGCAAGCTATAAAG
TTAATGGAATCAAACCACTGATGATATTACCAACCAAACAACATTCAATC
TCTAAACGATTTTTTGAGGAGGATTCGTCATCAGATGAGAAAGGTGAGGA
ATTTGAATCTGAAGGAAGCGAAATGTCCGAAGATGAAACTGATGATGAAA
GCAACATCCAAAAACTCAAGAATTGCTGGAAAGGCCTGGCACCGCCAACA
AAAGAGACTGGTAGATGGTATGCTGCCATCTACACCACCAAGAAAACAAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTA
tgatttaattgaaaatatgtttaaCAAAGTATCAGGACTAAACCGTCTAG
CTTTAGTAAATATGATGTAATATCCAtacttttttaagcttttgagtATA
TGCTAAACATTATTGTTGTATTTTTgcatagtttttcttgaaaatgtttc
acaaaattgtattccaGAAGTATGTTTGAGAAATAGATGAATATTTTTGT
GttcaacatcaaaaaatgctaaaaCTCACAATTTTTCTCATatgtacctc
aaaacccacaattaaaaagtgagttttttgaGAGCAATTAAAATAAACAC
ATTGATTACAGCACTTAGGACTTTTTTCCTATATTTGTGTTATGCCTAGA
GGTAATAGAAAACCAAAGATTGATAGGTTAGTCAATAGCAAGTGACTtat
ctgaccgttttttgaaaaaaatcaaaaattttgaagctagATTTCCAGCG
TTAAAtcttgataaaaaacttttacctCATCGATAATgctcaattttgtt
ttaaataataaagaaacTATTATGCCAACATAATCTTAAAAATTTATgct
gataaaaacattttagatttttctagaactcctgaaatgaaattgttggt
TTTGAGGTACCTGTGGGTTTTGTGGTACATATACCTTGACGATCTTACTC
ACACAAAGTGCCTCGTGATTAGATTGATTAAACGTATCACTAATAGACAT
AGTATATGGTTACCACCCCTCTTTTGACCCCTTTTGTGTCAAAACTGATA
TAAACTCCTTGAGTTTCTTTCCACTCTGAATTTATATTTCCAGAACGTAT
AAAATTTTTACTGCTTCTAACCTGAAACTATTTCTGCCAGCTTCATCAGT
ATTGCTGGCCATCGCTGGCCGTCATCCTTTGAAATAAGATCTCTGTGTAA
AACAGACGATAACCCACCCTCCACAGTTCGTGATCAAACATGGCTGTACT
CAGCCTTATATTGGTTCATATACAGAAATGTGCGTTTTCTAGAGTGCTTA
AGACTATTAAGAGACCATAGTAAAATATCATCAACAGCTCTTACAATCTT
GAACTCTACATTCTTCCATAGAAATCACACAATATTGGCATTGCCATGGA
TACGAAAGATGGTCTCCTTGTCCCAAACATCAAGAACATCCAACTGAAGA
GCGTCTTCCAAGTAGCGCAAGACTTGAACCATTTACATGAATTGGGAAAA
CAAGGCAAATTAGGACTCGATGATTTAACAGGAGGAACTTTCACTTTATC
GAATATTGGATCTGTAAGTATGACTAGATTTCTCTAATTTTGACCCTCGT
GTGGTGAAGCAGCTGAATTACAGAGTATTTTTTGTGAAACCTTTTAAAAA
GCGGTCTTCGTTTTACCTCGAATTATTCAAGTCGAATAAAAGAGTTTTGG
ATTGGTGAAAGTTGTATAGTTTCTGTGTGTTTAATCTCAGTGTAGGTTTC
ATTTTTGTTACCGAACTAGGTCTCTATAATTTAACAAAAAGGACTTTCAA
CCTGTCCAATATTGGGTCTGTTGGTTTTTttaattccttttttttctttt
catggTCCTTTTCTTTAGGGAAAGGTCAGTCTCTCGACAACAGTCAAGGG
TGGCTTGAAGGTTCTCATTTTCAATAGGTCTGCGTGGTACACTCACTCTT
TTGACTAGGTTGCTCATACAGGATATAAATCATACAATTTTTGTATAGCT
TTCGGGATTCCTAAAGGTAAGTCTTTCGATCGCATCCGAAAGCACCCCGA
AGAGTTATGGGGTATGACCCGGCCAGGTCACGTTTAttgcttcgtagtac
actctgtgcgcattgtctgtttgataaaaaaattcccgtacgggcNCTTG
GGGTATGACCCAACCAGGTCTCGTTTAttgcttcgtagtacactctgtgc
gcattgtctgtttgataaaaaaattcccgtacgggcCTTTCTACGataaa
gtatgatttataaatagcaacacttctctcatcgtctcccctctctcacc
accactccatcgcagcggtcgcagttttaaaatctcaaatgagaaaagac
aatgacaacagaccctctacggcaatgaattttaaaattagccgtagatg
ctgggtctgtgtacagacaaggcCAGGGATCGAACCAATGACATTGTGCA
CCGTAGCCTTATGCTTTATTTTGCACTACGGTTTGCTCAGTAATTTTTCC
TGAAGATGGTATAGATTTCACTCAAATGTCATTACTCTCTAATagatttg
tcattttattgaatttgtCTTTTATACTGTGTATGTCGGATGGAAATGGT
TATTTAGGTGTGTGGCATTGGGTCGATGGACGTGTACTAAGTGACAGTTT
TTACACTAGGCTTGGATAGTGGTAGTATTCgagcaattttgttttgaact
ttttcCATCAATGATCTTGGGATTGGTTTCCCTAGTTTTTGGGTTCAGAT
GTCATacattttcttttggaaaggtgGGTTTTGACCTTCATCAACAGTTT
TGTATTGCTTTCTTCCAGTTTCATTTTCGTCACAATGATTCTTTTGAATG
TCATTTCATCTACAGATTGGAGGAACTTACGCCAAACCAGTGATCGCACC
TCCAGAAGTTGCCATTGGTGCTCTTGGCAAAATACAGGTACGGTAGAAat
cattaaaggttttgtttttaattaagagtgatatcgtttgcttactcgtc
aattttaattcacaagctttttcacgtCACGTTGAATTGACACTGCTCCa
cgcaagattggtcagaaaatggaaaagaaaaagattttttgcttatatca
tcataataaaacaaaaggcagacactgtcccgatatgaaatatgtatctg
atataaaacgggaacacttatgtaaaaacaaaacctttaaaaaggcttct
ttttttttcgtcatCAAGTATCATGTAAAAAGGTTTCAGACAGCATTTCG
TCACACTAGAAGCAGTAAAAATTGTATCTATTATTATATCAAACTTGGGT
TGAACAATATTCattgatttgaaaaaagaattaaactttggtgaaagatt
ttttgtcaattttgtgaACTTAAACAAGCAAGTGAAGAATTTTCTGCCCT
AAAGGCTGGTTTTCAAAAAGTGGAGGTCGGGGAAAATTAAAGGCAGAGTA
AAAATGTAATGAAAATTACAAAGACTTGTGTTACAAATGTTTTATTGACG
AGGAAGTTTCTTCTTATTTCGACTATTCATaaataatgttaatgttaatc
tttcatttttatttcgaactgttactgatttaaaaaaatcatttttaatg
gTTTGAATTGCATTGTTTATCTTCGTTCGTTTTGACAATAGGATTTTACA
TTCCTGTTTAAACGAAACATTTAAACAATCAAACTTTAGACTTTGGAAGA
TAATAATTGAGTCTTTGACCAGCTTTGATAGATTTGTCTCcgtaaaaagt
ttgatttgtGATTTGTCAAATCAAGTTTCAAATCTCGGAAATACTTTTTT
GGGGAGAAAGGTTTGTCAAAATAATAAGTTTAAATTCTATCAGCTGTTAA
TTATAGATTGTTTTTCTATAGAGGGTGTATATCTTCTCCTCGTAGAGTGC
TCAATACGTAAATAGAGCGTtattataataaagagttgacacaatatctt
tgtttcaaacttaGAGTTTCATAGTGCACAGGcaccaatcttcagtgaaa
tgagATAacgttagaaaataaaatacaatatgttgtcttcaaaaaatatt
tatgacgtcacatttgaACGTCATCAGGTGGTTCAAAGATATCaagctga
aaattgaaaatttcgtctGTGTCTACATTTGGCAATAATTTCTAATCTCT
TTAGATCTTAGAttgtttttctatattttctcaTTTCAGCATTTACCTCG
TTTCGATTCAGACGGCGAATTAGTGAAAGCAAGCATTTTTAACGTCAGTT
GGTCGGCTGACCATCGTGTTATAGACGGTGCGACCATGGCTAGATATTCT
AACCTCTGGAAGTCATACCTTGAAACCCCATCATCAATGATCTTGGACAT
GAAGTAGAGAGAAAAGCTCCTTTTTAAAATTCCGAAGGAtaacaaattta
tttattttttaattttttttttgaatctaCCTTCAAATTCTTATTTATGA
CAATCGTAATTTTCCAATTTTACTCTTGTGCTTACGCAGGGACCTGGAGA
TTAATTGGGATGTTGTCAGATTATTTTGTCCTTTTACGAATTTAGAAATC
CATAGAGCCAAGCCTTCCCTTTTTACTTACATTTTGGTAACGGCTTAACC
TTAAAGCTAAGACCAATATTTAACAATATGAAATGAAACTTGCATGTTTT
TGCTTATCGCCTAGATTTGAGGAAAACGGCCGATGCCTAGCCCCTCCTAA
TTCCGGCTATTGTTTTTAGATACTATTAGTACTTCAGATACTTAGGTTtt
taataaaatagattttcaaacaaatttaacggaaaaatatttatcctctt
tcatttgatttgttatttttagaccattatttttttctttttttaaagaa
atatgaaaaacgAAAGTCGAAGAACAAATCGACGCTGTTTTCCTTCTTGC
GTAACGTCTGACGGCACTTTTTGACGACGC

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00046003	TCONS_00046003	Clytia hemisphaerica	transcript
TCONS_00046004	TCONS_00046004	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00046003-protein	TCONS_00046003-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_105	supercontig	scaffold_105:547413..555692 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
91.5	81.2	152.19	167.89	76.63	53.91	60.5	64.22	44.87	69.32	39.68	41.7	27.67	27.88	41.61	51.3	52.07	48.74	18.28	18.19	22.5	24.25	51.87	42.6	33.03	32.8	32.61	28.24	39	35.5

You are here

XLOC_029401 (gene) - C. hemisphaerica