XLOC_029397 (gene) - C. hemisphaerica

Overview
NameXLOC_029397
Unique NameXLOC_029397
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_105:479523..483288+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029397 ID=XLOC_029397|Name=XLOC_029397|organism=Clytia hemisphaerica|type=gene|length=3766bp|location=Sequence derived from alignment at scaffold_105:479523..483288+ (Clytia hemisphaerica)
TTCAAGCGTAATATAATATTGATTCCAATACTGTCGTATTTAGAGCACGG AACTATTTTCTTTTCAGCAGAATGTCTATTTCTTTATAAATGGATGATAG AAAGGAGAAGGAAGGAGGAAAGACATGTGAGGGATATGAGGATTATTTGA ACAGTGGTGATATGGAGATTACACAATGTGTAAGAGAAGCACATCTCATG GTGGACGAAGTCATCCAAAAATCATCCAATTCTCTTCTCTATAACAAAGA CGCAAAACTTCCATACATCAAATGGTTGACCATTCAGGAATTTACCATTC AAAATGGCGTCTTGAAAATCGACGAGTTTATAAAGGTGAACAAAGTAGCC TAATGAAATTAAATAACCTTATAAAATCAGTGGTGAAATTCTTGGAAGAG TCGCAATTATTGATTCCTAATTCTTCATTGAATAAAACCATCTTATTCTG GTGGCAGGCACTataatctttgaaaaacaactGATTATATATTTATGTTT TGCAGTCAATAGCAAGAGTTGGGGAAGCCTTGTCACCAATACGATTTTTA ACAACCCTGTATATCCCACCTTgagaagaccgtgtaactaataatgtttt tcattatttctgTTTTTGTTAACAGACTTGGGATCGCAAACCAAATTGGT TGTATTGTGTAGACTTTTTGTGTCAAGAACACCATGAATACAGCGAGCGC TATCGATATCGCGTGAAATGGAGCATTCCTACTCGCAGAAAACCGATCCC TCGAGCGACTGCTTCCGTTTATTTCACATTTGATGTCAGCAATGTCAAAC CTTTGGTATGTTCACTTTTTCTCTTAGTTTTTTAAAGGTCTgaggttaaa gaaaaattcttgtaccgggtgcaccaaaaaaaagtatacaactttgtcga gatattgtgagcttcaggatttaaactttttgttcattctttttttatcg catagggatgctctaacttgaattttgagctatcatacattaggtttgaa aaagtaattcgaaaattattttaaaaaaactgatttttttaatgtcgaaa tttcaaagaaatcatcaaaaaacagcgagcaaacttttctcttgacactt accttctttacacataaaaataccaaaagatgcaactgtgttcatcaaaa cttgttacaaatttaagaatatggtaaaacaagatattcccatgtgggat aacattttcagaaaagctgaaaaattttggaaatctctaagagaggtttt gattttatgtgtgtgtgctatgtgagaaattttctgaaaaaatagatcat TATTCCTCGACTAGTttctcaaagaacttgggtttGCATTGAATTTGCTg gttttggaaatttttatgacgtgcaaataagatggagaaactGTTGGCAA GATATGAGATAAGAGaaaaaagaaccaaaaaaacaatgaaattatgtttt tgttatttttgtcttatttatagcgtgattgctgtttttaatgatttttt aaaatttcgaccttgaaaaaaagtcagtattttggaaataactttcgaac tactttttcaaatttaatgtataatagctcaaaattcaagttagagcatc ctctatacaataaaaaaagaattaacaaaaatttaaatcctgaagctcac catatctcgacaaacttgtatacttttttttggtgcacccggtatattaa GTGAAAATACTTGACTTGAAACACCTTACATTGGAGATAGCCCTGTCTCA GAAGCCTGGTTTTTTATCATTAAACTTAAGGTATTAAGCCTGGAAAAGAT GTGTCTCGTTATTTTTGATAGGCGGAGATTTcaattggaatgtttacaat tGAAAATCCAAAGACTAAAAAATATCATGTTAGGTACCTCTGGCAATCGT AAAACCTTTCCATTGCAAGACAGAATCAAAATTATGCTTTGTTTCCCTGT GAAGATTTTTCGCGTCAATTTTTACTTTGGATCAATACTCATTGGTTTCA GTCCTAGCGGGTCTTTAGTCTGTAGCAAGGGTCTTTAGTCTGTAGCAAGG GTCTTTGAAAAAGTTTGCTGAAAATTTCGAGGCTCTTCTGATGTCCGTAT AAAGCTTGTTCCTTCTCAAATTATAGATGTTTTTCGTTCTTCCATAGGAT TCGTTGGTTGAAGTGTATTACATTTTCGAAAGCAGTAAACTCGTTCATAG GTATGATGTTTGATTCTCTCAGTCATTTTATTTACCCCACCATGTTTATT CTTCCTTCTTCTGTCAATAAAGTCCTTTCTCGAGATGCAGAATAACTTTG TTGATCTTGTTTTCAAATATTCTCAGAAAGATTGCTTAAACATAAAAAGA CGTAAAGTTGATGTTTGGTAACTTTTGTGCGTTTGTTTTCGAAACTCTTT CGAAACTCTTTCGAATCACTAGGCGAagtaaaataccaaaataacGCCCC AGTTCGTAAAGGTCGGTCTCCATTTACGTGCGCTGCGATTGCACCGTTTa gtttcaatcatttttgcttagaaaaatgATTACGTCATGAAAATGTAGTG CGCGTTCGAAAAAATACATTAAGATACAAACTTTTTTAACCGTTACAtta gatcgcgccaatggaattgcatcatttttcttttgatcgatagcgtggaa gctttgctagATAAAGTACGATCGCAGCGCGTGCAAGTGAAGACCGGTCT TAACACCTAGGTTCTTCACAATTTGGtagcttttttcaaactgaagTTCG TGGTTTATTTCCTTTGCAATGGAGGAAGATAGGTAGTTTGGTCAAGATTG AGGAACAGGGTATTATAAAAATAGTAATCATTTGGAAATGCTCTAAAGGG TTAAATTATCAATGTTCAAATTGATCATccaaatttatttcttttcagaG CGGACTCATCTCGGTTCCGTGAAAAATGGCTGTCTGACGTCATCGATGCT AAAGTGCTACTGATGGATGCTATCACTTTTTAAGTTAATCACATCTTTTT TGATTCACTGTAAATATAATTTGTTGTTAATATATCAATTTTCGTGTAAG CTGTAATATGTGAATGATCAATGACTAAATGAAATCATCgaggaaatttt tcttttaaaaatgcaTACTTTAttccatagtataagaaagccgcggctgg aatgagttcagttgaatttctgttgttctatGTCGTAAGAATGAATTTTT TTGTGGTTCAGTGACAATTTCCATTGTCAATTTAATTTGACTTTTAACAA AGTCCCTCGTAAGACGTAATTTTGCTCATAAACACAAATCTCTTGATAAT TCACGCATTCATAAGATCGAAAGATATTTCCTTGGGCTAATAATTTAATG GTAAAAGGAATAACCAGAAGCGTCGTGTTTTTTATTTAAAAACTGTATAT TCGACCTACACAACAAGAGGTCATCTTCAGAGTGTAAAAATCTATCAACA AGAAAAAATTTTAAAAACATTTTAAGAACAAATCTATAATTGGCTAATAA AATTACAATAAAAACAGTTTTGAAAAAAGACAAAACGAAAAGCTAAAAAA CAGTTAAAAATAAATACCTCATAAGATCAAAGTAAAAGAAAAGACTCTTG GTTTAAAAGTATTTGAACGATCAGAATGTCAgtgctttaagaacttgaag aaaattgagtgcctcgaaatgccttccagattattctgaaaaattcttac tggtattagtaaataatcattcaagcagtattctgtgaaaatttcattca aaaagcaaGAGTATTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00045994TCONS_00045994Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00045994-proteinTCONS_00045994-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_105supercontigscaffold_105:479523..483288 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
AKAP14A-kinase anchor protein 14 isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
65.26 68.52 83.37 88.05 30.03 20.71 24.54 22.49 27.99 27.81 32.54 31.03 4.92 3.73 4.86 5.24 6.27 7.28 11.27 7.56 7.67 7.24 16.29 17.21 39.81 36.96 6.05 7.77 5.02 5.59