XLOC_029322 (gene) - C. hemisphaerica

Overview
NameXLOC_029322
Unique NameXLOC_029322
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_102:334684..341461-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029322 ID=XLOC_029322|Name=XLOC_029322|organism=Clytia hemisphaerica|type=gene|length=6778bp|location=Sequence derived from alignment at scaffold_102:334684..341461- (Clytia hemisphaerica)
TTTACATTGTCGATGGTTCTGTCTTTAGTTTGCGGTAGTAGGTTGTATTC TTTTCCCACATTTTAATGTATTTTTTAGACGTAAATAAATAAAAAGCGAT CGCAATGCTGCAAGCCGTTCGTAAGCAAATCTTGCCAACTTCCAACCGAG TCCTAGCTGCTTGTTTCAACACTTCAGCAGCACAACATTCAGAAGTTCAA TATGGTGTTCCTACTAAAATGATGGCAACAGAGGCTCTGGTTGAAGCTAT GGTTGCACAAGGTGTTACCGATATTTTCGGAATTGTTGGCTCTGCTTTTA TGGATCCGTTAGATATCTTCCCGGAAGCAGGAATCCGGTTTTTGCCAGTT CAACATGAACAGAATGCAGGGCACATGGCTGATGGTTATTCTAGAGCAAC CGGAAAACACGGAGTCTGCATTGCACAAAATGGCCCAGGTATCTAGCAAT TTTTTTGTCATCGTTTCTTTCCTTTGGTTTTCTTTATCTAAACTAATGTC AATAGATCTTATCGGAGTTTTTGATTTTTCTAAAAAAGCGATGCATTGTG GGATTGTTTCGGGGGTATTACAATAGAAATCTCTTAGGAATTCCTCGAAG GAATTCTATTGTAATACCCCCGAAACAATCCCACATCACAGTTTAGGAAA AATCAAAAACTCCGATAAGGTCTAATGAATAACACAATATTCTAGTGACT AAGACTTCTCTGCACATCCTTTGAATATTAATATGCAAGAAAATAGCGCT GCGTTGCCTCCCTGGTCTGCGTGTAAGCCAAAAGCGTTGTGTGGAATAAA TATCGTATCATCGTTAATTTCTTTAGTCGAGTTTATAGCACCATAAAAGG TAAAACTCAAAGCAAGATGATTTGTTGACCAGTGAAAATTTGTAAAAATG TGTTAACTTTCTGTTTTTTTATGGACACGCTACATACTCTAAACCTTTCA CTTTATTCTTCTTTTCAAAGGCATCACCAATTACGTCACATCTGTCGCTG CTGCATACTGGGCCCATTCCCCTGTCGTTTGCGTCACACCTGAAGCTGGT ACAATGACCAAAGGCCTTGGTGGTTTCCAAGAATCTGACCAAATGGAGAT CTTCAACAGCATTACAAAGTTTCAAGGACATGTTAATAACCCTGGACGTA TGGCTGAAATCACATCACGATGCTTTGATATTGCAATGAACGAACGTGGC CCGACTCAATTGAATATCCCACGTGACTATTTCTACCACGAAGGTATTTT AAGATAATTTAAAACCAATGCTTTACTCTTTGATCATGTATTTATCTTAG CTAATTTAACTGAATGTTGTCAAGAACTCATAACGATAAGAAATTACAAA TAGTATTGTAACTATCACGCAAAATTAACGTCCTTGGACTGCTTTCGTAA CCTTACTTTTTTCTGTCTTATTTCCTACAAAGAAGAAGCATTGTAGAGAA CGTTCTTACGAGATTTCAGCTATTAACTTTAAACACAAGTAGAGTTTTTC AAAGTGCTTTATTTTAAGTACACTGCACGCCTATTCGGTTTTGTTGATTT TTTTCCTACAATTTCCTCGTTTCAGACGATTACATCATCAACAAACCACT CCGAGTAGAAAAATCTGCTGGCGGACCCACATCTTTGGAAAGTGCCGCTG AACTACTTCGTGGTGCCAAGAACCCAGTCATCTTAGCTGGTGGTGGCGTT GTCATTGGTGGAGCCACAAATAGTGTGAAAGCTCTTGCGGAATATTTACA AGCACCCGTTTGTACAACATATTTACACAATGATGCTTTCCCAGCATCTC ACCCACTGTGGTGTGGCCCTCTCGGTTACCTTGGACACCAAACTGCCATG CGAACAATCCACGAAGCTGATGTTGTCGTTGCTATAGGAACAAGGTATAC GATAATCTCAATAAAATGATCACTTTTTATTTATCGGGAGGTAATTTACT GCTTATTCATAACCCAATTTTACAAGATTAAAGTTATCTTCAAACTTGCA TGACAAAGCATAATTGAAAATTCCAAACATGTAATAACTCACATTTAGAA TATTGATTGCTCATGAAATACAAAGACCTATTCTGATAATTTCCTTTTCT TGCACAGATTGGGACCTTTCGCCACCCTACCACAATATGGTTTTGACTAC TGGCCTAAAAACGCCAAAGTCATTCAAATCGAAGCCGACCCAAGACGTAT CGGATTGGTGAAACCAATTGCTGTCGGTGTAAATGGGGACGCAGGGCTTG CTACCGATGATATCCTTGCAAGGCTCCAATTACACGGTGATGCACAAGCT TTGGCTAACAAAAATGAACGTATCACAAAATTGAATGAAGTCCGTGAAAC TTGGGAAAATTTATTGAATGATATGACTCATGACCAAACCAATGCACGAG AAGGTACTTTTTTGAAACTATGATTCTGCTTGATTGATTTCGGAAGAGTC CACGCTCTCTAATTCGACGTTCTATTATTCGATACACTCCATTATTCAAT ATTGAAAGTCACCGTCAAAAAGAAACTCTTATAAACGACGCTTTACCATT CGATAAGCTCCCTTATTCGATGAAAATTCAATTTCCCTTTGAATATCGAA TTAAAGAGTGTCAACTGTATGAGGAATCACAGTCAAAAAGAGCCTGTTAT GAATTTGTTTGAACCATACATAGCTTAGCTAGAAGATATCTTATCTTCCA TTATTTTCTTTCCTCAGGTAAGATCAACCCACGTGAGGCTTTACGCGAGT TAGAACTAGCCACGCCCAAAGATGCTATGGTTTCTACTGATATCGGTAAT GTTTGCTCAGTTGCCAATGGATATCTTCGCTTCGAAGAATCTCCAAGCTT CTTTGCCGCTATGTCTTTTGGTAATTGTCAATACGCCTTCCCTACGATGA TGGGCGCTAAAGTTGGACGCCCAGACCGCCCAGCTATTGCATACGTTGGT GATGGTGCTTGGGGAATGAGTTTCAATGAATTGTTGACTTGTGTGCGAGA ACAAATTCCAATGATCGCCGTCGTTTTCAATAATGGACAATGGGGGGCTG AGAAGAAAAACCAGGTAAGGTTTCTCGTTAATTTCTCTTCTGCTTGTGCC CAAGAGAACATTTGAACACTTTAACTTTATTTTGATAATTTCACGAGGCA CTATCATGGTGTGATAATCTAAGTTTCGTTGGAAAGATTAGAACTATCTT GAGGCTATTTTGCCCTTGAGAGTAGATCTTAGGGGGACTGAAGAGAATTC GGTATTTTTCGGTACTTTGTTATTTTACCGGAAAAAAACGGTATTCTGAT ATTCTTTACCCTCGGAAGCCTCACAAGATAGTGAAGTGATCAAACATTTC TAACGTACACGTTTTTTTATAAGAACAAACTATATAAGAACATAAAGCTT CGATGGCCAAAATTCTAAAGAACAAATTGAGAACATTTTAAGGGTTTGTG GACTCAAAAACACCCGTTTTCTTAAGAAAATGGGTTTAAAAATGGTCACA AAATGGTGAAAATAAGAACATTTTAAGAACATTTTTAGGCTTGAAACCCA AAAGGTTAAGAACATCCCAAGGCTTCAAAAAATTTGGACGTTCTTACAAA AAAACGTGTAATGATACTCAACGGTCTGTAAAGAATAAAAAAAGTGTCAC TGGTCAATCGTGTCACTATTTGATGATTTTCCGTCTTTGGAAAGTTTAAA AATAGCACACTTTTGATGAAATGGATTTATTGTTGTTATCTTTACCCCAG TGGTCTTTACCAAAACTTAAGATTTGTTATCGGTTTGTTGACGAATTAGT GAATATACGAACTTGTTTACTTAAGAAAAATGTATTTTGATTCAGCCAGA CGTTCCATAAACAATCTCTAAACGGAGGAGTGCTTTTTACTAGTAAATTC TTAAGTAATATCCCTAAACTGTAGCGATTATGTAATACGATTCCAGTGGT ATAGAATGTTTTTTATGATTTATGAGGAGTGCGATTTGATTCATTCCCCG ATATTGACATGAGGAAAATTCACGTTTTAAAAAGGTAGTAGGGGCCACTA TGTCGCGAAAAAGCTTCCCGTGTGATGACGTGACATGACGATGACGTCAT CGAAAAACAAAAATTTGCCAAAATTAAAAAACTTTTGGTTTTTTGGAAAG AGTACCTTCCAGTGAACAAAAATTATTATTACGAAAAAGTCTGAAAATCC TTTTTAAGAAGTCTATGAGCCAAAATTGNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCACCT CTCAAATTTTGATCTTCTACATTCAAGGAACAATATTCAATCATAAAATC CCTTTGCACAAGCTGCTGCACACGGGAAGACATAGTGGCCTCTACTAAGG CCATAAACCTTTGCTGGCAGCATCCTTCAAGAAAAACAGTCTCGGAGCTA CTGGTTAATTAGCCCAAATATTGTCTCCTCTGACTCTAAATTATTTTTTA TAAATCCTGCACTTTTTTTGCATTTACCCTTCCTTTGTTGACAATTAGAC AGACGATAGAACACCCCTGTCTGGAACTTTTTTTCTCAATGGGGATAAAA AATTCCTAGTGAAATCCCAATGGGGATAGAAATTCCTTTGTTCAAAGGTT AAAAAATTCAGTGGCAATTTTTAAAAATTGAATTTTGAACGGGGGATGAA ATTAAAGTCAATTTCCCAGTGGGGCTGAAATTCAAAGGTATTTTTTCCCA TTGGGGGGCGAGATTTTTGTCAAATTTTCTAGTGGGGCTGGGGTTTTAGC GGGTCTGCGACACAGGGGTATGATAGAGGAGAAAATACACTTATTTGCGT TATGGTCGAAAGATCCACCAAAATATTTAACTTATATGAGTAGTATTTGA TACATTCTTTTACAAAGAGGACTCCCCTACCGTCGTTTCCCATTTCCACT TCTTGCGATTCTTGTCACTTTTCGGGAATCTTTCCGTTACTTTCCCCGGG ATAACCGGCATGAGATTGAAAAGGGTTTGCTTTAAAGTACGGAAAATCTT GTGTTTACTCACGAAACTGCCAAACTTTCCGAAGCTCATTTCTTCAACTA CCCGAAGTCCTGGTCATATTCCGCTAGTAAGGTGACAAAGGAATCTTAGT ACGGGAATGGGAAACTTATAAAAAACGACGGTAACCCGTTTTACATGCAT AAATCCTGTTTTTATAAAATCTAACTAAAAATTACACATCCATTAACACA AAGAATTAGCAGGACATAAAAGATTCACACACAGTTTAAATAGTTGGGGA ATTAAATTTGACTTCAATTTTTTTTTCAAAGGTCTTGTGGTTCGGTGATC GATACATTGGTGTCAATTTAGACAATCCATGGTCATATGCTGAAATTGCA CGAAGCATGAAATGTGAAGGTATCACTTGCACACACAAAGATCAAGTTGG TAGTGCATTAACCCAGGCTCTTCAACATCAACGTGACGGAAAAACTACAG TTATTGAACTTATGTTCAGTCGCGAACTTGGAGATCCTTTCAGACGTGAT GCTATGAAATTACCCAAAAGATATTTGTCTAAATATCAAAGCACTATTCA GTCACAAGAATCGTCCACTGGCCAACCTACCGATAATTAGGATTATGGGT AATTTGTTGGGATGAAAATTAAAAGATTTTATTGAGAATTATATTTTTAA TAGAAATTTTAAAAATCTTTTTTGTATAAATTTATTATTAAATTCTTTTG GTTTTTTTATATTAGGGGCCTTTTTCTACTTTTTTTAATGTACAATAACA ACATTATTTTTTTCTTGAAGGTAAATATTAGAATAACACTGAAAAAGTGA ATTTAAAAACTAATTTGATACTGTCTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00045896TCONS_00045896Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00045896-proteinTCONS_00045896-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:334684..341461 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.13 4.92 2.8 2.7 6.92 6.86 11.7 11.62 30.18 14.55 7.45 60.3 277.62 275.95 472.68 868.94 346.52 302.91 364.03 369.53 229.54 267.52 177.16 164.2 42.35 35.21 57.16 77.45 313.98 204.93