XLOC_029304 (gene) - C. hemisphaerica

Overview
NameXLOC_029304
Unique NameXLOC_029304
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_102:434988..442086+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029304 ID=XLOC_029304|Name=XLOC_029304|organism=Clytia hemisphaerica|type=gene|length=7099bp|location=Sequence derived from alignment at scaffold_102:434988..442086+ (Clytia hemisphaerica)
CGAGTGTGTTacaattttccggtctgtagtttgtatgacctgcgtcctgt
gtcctgtctcctgcgtccTGTCTCCTGCCTTTCGAACCAACCGAACCACA
CTTGCTTTAATTTTCACACGCACCTACCACCTACAGAGACGATCAATTGA
TAATCGTTCTCCCACGTTTTATTTACTTTCATTTCTATTATATTTTTAAT
ATCATCTTTCATTACTTCGTTTGTACATTCAATGCGATATTTTTAAATGC
TTTCATCAGCACGTCTATTGCGAAAGAGAGGACTGTCCACCTCTAGTCGA
TTGGAAGCTGTCATGTCGACTTTTTACGAACTTTCGGCTGAAAAGCTAGA
TGGAAAAACCGTTcaactttcaaaatataaagGCAAAGTTGTTCTGGTAT
TGAATACAGCAACACTATGAGGAACAACTGTCAGGGATTTCACTCAGGTA
TCTATCTAATTTATTCTCAAAATttacttcagttgagctagattTGTGTG
TGTGGGTGTCTGTCCTGTTGTGCACATGTGTGCCTGTTCTGTCattaaaa
ctttagggcagcctggagacttcaaagtTGGTCTTACTGGGCTGAAATTT
AGCACACTTGTtctttgggtgaatatctggagttttttttcattttttaa
aaaactttgattTCTGGGGCCTCTaggagccccccccccaagcgGACCCA
AAATTCCCGCCAtcgtgccaattttttttcgatttcacgacatcacgcct
gaaaaatttgattatcACAATCACgctaattttttccaattttatgccat
tacgcctagaaaatttagttttcacgctcatattttATTCTCTGGATAAA
TTCAGTTTTAAACCACGTTTAGACCCATTGTATGAATAAAATACTGttat
ataaacttaatttttgtcCACAAATAGGTGTGTGTTTggtcgtcaatcag
tttttaggcattctcaTATGTGTAAGTGAAGATATATCGTGTTTCTGATA
GGAAAAATAACGTAATTTTGACTTGTGCATAACGAAAAATGTTTGACAAC
TGGTGGGTCACATCAAAGGGAttgagggctgaggtatatttgagtaaatc
gacaaggcccaccatggttgaacaacggagaaaatttttgaattttgaag
ggttcaaagtgctattttaggacccattccaattcaaattgaaaaataat
tcatgtaaaaataatggaaattttttaaaaatacaagtagctttttttgt
aaaaacgtgaggggccatgccccctggtccatgggcattaattgtgaatt
agcgtgaatagttttcaaaagggaaCAAGGAGAggcgacgggagaaattt
tcaattccataagggtaaaattgccctcatttactctcttttttttctcc
aaaatatGGTTTGATCAATGCCAATCTGCtcaaaattacacctcataata
aacctgttgctttctttctgtttaaggctttgctacaaatatatattttc
ctgaaataaaggacctgatgtctttgatgcatctaaaaataagcatctaa
gaaagagaggaaaatgttaGTTACAGAGGAagcacaaccatggtttgcgc
cgacgggagaaattttccattttttgaccCTCTCAtagagatattaaccc
ttaaaaacagtgtttttcagccagaacaGGCCAGAAACAgttgttttgtc
cagtttttgcacttttggaagctcaatatcccgagttaggtacagaaatc
acctatacttgcaatatatctctaactctaatcttaattttttgagagct
ttccaaaaatatacaacaggtctccgttttctcaagctaaaattttcatN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCTACTACAAAGCTTTACCCTCAAAAATGGTTTCGAAATaaaggaaaaa
ctttaattgcaattttctcaaaatgactaTTATTGGAACTGATTTTCGCA
GAAACTAATATTCGcggttgaaaaaaaatcagaaaattgtatttcgcggc
tTCAAAGTTTTgcggttttgccaaaaaaagcctgaaaaacgCTGAAATGA
ACTCCCGtgcaaaattagttccaataaggttaTAAGGAAGTgaatgcccc
ttggtcaggctcgtgtgtgcttaagttctcaaagcatccagacatagctt
atgcttattatatgcttatgaatcatgcttgtGATTAACCCTGAGCCAAA
TTTTTAGTGAAATGTCAGAAATAATGTAAACATtttggaatgtctttttt
ttacttgacctctaccaaacctttttaaacagataaaaaatgacaactgg
aaaaatatttaaggctgacatatatgcccATGCTATGCTTagaaattctg
caaatctgagtttttgtatgcttataagcgaTATGCTCATAAAAAATATG
TAGATCCATTTTGAATTAAGGCTCACAGGACTTAGatcccttttgaatta
aggataACTTGGATCATGCGCTTGGATAATTTGAGTTTTAATATTCAATT
CATCATCAAAAGCCTATTTTTCAATGACTTTGGGCAACaggtgaaaagtt
tttaacactTACAAGGGGGTTTAAGGTTGGGGGAGGAGGGGAATTAACCC
TTTTTTCTCAACGAAAATTTCAACAGAATTTTGGAAATAGGGTCCTCTGT
TGGCGACAAAAAACAGGGTTTGACAGATATCGGGGAAAAACAGGTGGAAT
CACGGAAACATATCCCCCCTGAAGCCCCCCTTTACCACTGCTAGCAAAAG
CAAATACATAATAGCTATTTCGATAGAATGAAAGGGCATCTTACAGATTT
ATCTAGCCTATTGGTATGAATTGTGCTCATAATTTAGATTTTGGTGCACT
TTCAACTCATCCAGTCTATAATAaataaaacaagacgacttttagtggaa
aataattttgaaaataagagACCAATTTGATCAACAGTTTTATGGACCCA
ACCAAAcctgaaattccaaaagtcctaataacaataaaataaaaattcta
cttttattttttttttgcctactGACCGACCCTTTTTTATGGGTAGCTTG
GCccttaaaacaacaaattaaattggcctcgcctacATATGATGACGTAA
AACTGAAACCATCAtgtgaaaatgagaaaaataatgaACTTGGGCATTTT
GACTATAAAATCTATATATATTCTaatcaagataaaaagaaattgaatca
CATCTCTTTTTTTAACCGTATGAAGAAGATCTGCGTGTTCAATTttggaa
gccttcggatgttcttaacatgttcttaattttgtgTTCTgggttcttaa
tttcaccattttatgagtattttggTGCATTTTCCTCataaattgggtgt
tttagagtttatAAAGCCTTACATTTTTCTCAACTTGCTCTTAAGATTTT
Ggctatcaaagccttatgttcttatataatttgttcttataaaaaaaagt
attaGAGCGTAGGATATAGCAATCAACCaatttaattttattgtttttta
cgctcactacagtatgtggcccccaaaacgtcaatcaaacttaaaatttc
tctcaaatctagaggaaaagaggttttacaaagatttttgctgcatgaaa
aactttaacatctctactttatttcccggaagttctttttcaaaattttc
aatttcaacaatatttttcaatcgcttaaagataggtagctgttttctaa
tggcccccaaaacaaaggtttgcaatttttgcaatttctcgagatatctt
taagatatgaagacaaaattttgaccatagtttggaaatgtgatttagag
ggttttggacataaatttgtttgataaaacgtaggtgtagttaaaatcaa
attattaagctcagtggtaatagggggaaatatatgaacatatttgtgtt
tacccttaaatttacgacccgatggattcaaaatttatgatttttatgaa
atatttcaagattttcgatattgcaaagtccaaactgaaaatttagaaat
tttcaaaatgacaattttgatttaacaacgtcttaatcaagtttctaaaa
actaatctcttttgaaattagttccattcatgtatggaataagctgtgaa
aattttagaaaaaaatgttaagctttaaaggtatttttctcctatatttt
gcaaaaaaatgacagaatttgctgtttttgctgattcagcgaaaatcttt
ataatataatgttaattttttgttataaaatatTAACTCGAGCTGATAGG
GAtagaatttcaagattttttgctgtttctcatatttagaaatTTCGGTT
TAATCAATGCTGATTTTAGGGTCCCAAAATAAAGGTTGatctttaagatg
ctatatcttttacccatcctctaaagtaACAGATGTATTTGCCTTtcctg
aacggcattaggtgtagaaagtttcctatacctcATTTTCATTacttatt
ttcactatccaaggagctagagtgagttatatgcaatttttatctaattt
tggtgttaaaatatttccttcagacgcaaatatgttattttgaatctgtc
tcaaaccatcaagaacatactcatttttaagtataactatcattctctca
aaataaacaaaaatcgtttaattcggataaatctacaagtcagaatcctc
attttaatgacgacctccgttttgggggccgtctccgttttgggggccgt
ctccgttttgggggccgtctccgttttgggggccatatactgtaggaTAC
AAGTTTTCTCCCCGGTATTAATGTGACACGATACCATAACAGCTGTTTAG
CTGCGCCGTATTGTTTGGCTGCCAATCTTACTAGCAATAAATTTACCATT
GTAACTTTAAACACTCCTTGACGGATAAAATAAGATTATTGCAAAATAGG
ATTAAGACTGACAGTATCTTTACTTGAGTTTATTTTGTATATTTCAGATG
AACGAATTGATGGACAAATATGCATCAAAAGGTTTATCAANaattctgat
aaatctacaagtcagaatcctcattttaatgacgacctccgttttggggg
ccgtctccgttttgggggccatatactgtaggaTACAAGTTTCTTCCTCG
GTATTAATGTGACACGATACCATAACAGCTGTTTAGCTGCGCCGTATTGT
TTGGCTGCCAATCTTACTAGCAATAAATTTACCATTGTAACTTTAAACAC
TCTTTGACGGATAAGATAAGATTATTGCAAAATAAGATTAAGACTGACAG
TATCTTTACTTGAGTTTATTTTGTATATTTCAGATGAACGAATTGATGGA
CAAATATGCATCAAAAGGTTTATCAATCCTTGCTTTCCCATGTAACCAAT
TTGGTCACCAAGAGAACTGCACAAATAGTGAAATTCTTTCCACATTGAAA
TATGTCCGTCCTGGAAACGGGTATGTACCAAAATTTGACATGTTTGCCAA
AGTTGAAGTTAACGGTTCAAACACTCATCCAGTTTTTAAATTCTTGAAAC
AACATTTACCATTACCACATGACGATCAGGTTAGTTTGATGGGGAATAAC
GCGTACATCATATGGAATCCAGTTGAACGGTCTGATATTGcttggaattt
tgaaaaatttcttgttgGCAAAAATGGATTACCAATTAAAAGGTatagta
aaaaatttgaaaccatGAATATTGCAGATGATATTGAGGCTGCACTTAAG
GCCGCTTAAGTTAAAGTAGAATTATTATGGGATGCATTGGTGAGACAAGT
AGTTTATGGGCGGAGTAACCGTTAAATATGATTTTTTTTAGATAGAAAAG
ATGACTTTTGGTTTATTATTGCTGTTGTTGACTAACTGTTTGGAAATAGA
AACTTAAAATATTAAATCAATTGTCAACCAACGCTACTTTTTTTACATTT
TTAAATTAAGTCTTTCTCATAAAATTACAAATTAGTTTAGCCTACAATCA
TGGTCGAAATATATTGAGAATTCCGGTCATGTTAACGTTTTTCAAGATTT
TAAGCTCCGGTAAGAAAGTTGATTTTGGGCTATCTCTTTAATTTAATCGA
ATATTTCAATTTGGGATGGGTTGACTTCCAGGCTATATTTTGAGCCTTAT
TGGACTATTTTTGAACTTTTGAATCCTTCGACTCCGATTCTAGCGTTAAA
ACTCTACCCTTCGAACCTATTTTAGAGCACTTACATATCGATTGTGGTTT
CAAAACTTCCTGGGGAATTTCCCTTTTTTCTCAAATATTATGACCTTGAT
TGATTGTACCATTAAAAAGGTAACTGATTGTATTTATTTTGGTAGGTCTA
TATGGAAATTATGATTGTATTTTTTTTATCTGCACATATTATTTTTCTAG
TCGTAGTTTACTTTAACTCATAGCTTGCACACTTTAGAATACTGTTTTTT
TCCTTGATACCCAGATAATATTTATACGCAATTTTATGATTTTAACTTGG
TAAATTGTATATTTTTTTAATACAAGTCAATTTAAAGGATGTAATTTATG
ATTAGCGGATTTATATAACTTGGTTACCAGGGTAAAACTTGCAGTAGAAT
AAAGAATCAATTTTTTGAATATCTTTTTTTACTTCCATGAGTATTTTAAC
ACCAGGGGGGTTGaagcagttactacaagacatcatgccggttagtaccg
tggtggtgtgccatatgaattggataaagtcacttagtactcagatgtac
taactgcaaaaaagggtggtcccctgctaaaaaattgccaaattttggt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00045851TCONS_00045851Clytia hemisphaericatranscript
TCONS_00045852TCONS_00045852Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00045851-proteinTCONS_00045851-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:434988..442086 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GPX1glutathione peroxidase 1 isoform 1 Homo Sapiens
GPX2glutathione peroxidase 2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.34	27.37	7.72	6.05	48.9	35.84	40.87	43.45	41.35	35.87	42.21	29.53	28.14	22.84	32.95	29.78	61.16	60.37	28.41	44.2	57.29	56.84	73.05	73.83	43.67	56.09	78.75	59.67	52.56	45.09