XLOC_029298 (gene) - C. hemisphaerica

Overview
NameXLOC_029298
Unique NameXLOC_029298
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_102:232213..236413+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029298 ID=XLOC_029298|Name=XLOC_029298|organism=Clytia hemisphaerica|type=gene|length=4201bp|location=Sequence derived from alignment at scaffold_102:232213..236413+ (Clytia hemisphaerica)
TGGGTGACTCTGAAATCAAAAAGGTGTCCCAAATTGGTATCCCAAATAGA
CATTTTCGAAACAATCATGTACAATATATAACTTATGACAaagatgttat
tatttttttccactTTTATGAAGATATTATAAAGTAttaaaatgtatata
ttttgatttttgtagtgaaataatcaaaagaaaaattttatttacaaaat
ctCTTATCATTCAAGAATGAAGTAATAGGTAATTAAGATGTATACAATCG
CTCCCATCCCAGGGCGATTAGCGTGACTGATGAGGCTTCTTTCTTGCATG
ATGCGGGATCAGGAAATTTTCGCAATCGTGACGAAACCAAAAATTAGAAG
AGATGGTCTCGTGATaatctgtaccagagtgtatctcacgattatcgtag
cctagtgcaatgaattttgaaattagccgtagatatcgggtttgtgtaca
gactagTCTCGTGAGGGGTCCTACTCCATTTAGTATTCATAAGAGGGATG
GACTAACCTTTTCAAGCCACATGTAATTACCCCctgaatttttttctgga
aatttttcttgCATGAAAGGGAATGGCCCcagtaaaaaagtttaaaggTT
TGATAGATACCTTTTGTTAGATTGGGCTTGTAGCTACAATCAGCACCGAA
AAatattgaccatttttggtattttaacgtttttcagaatttaaaggtca
AAGCGAGAATTGCAGGTTCAGTATTTCCACTTTGCTTCATCggaattttt
caatttaggaGTGGCTTCCAGACTATATTCTctgccttattggaacattt
ttgagcttttagaacCTGAAATCCTAAGGTCCAAACTCTTAAGTCTAATT
TCAATACTCAGaattaaaactctacttccgaactgtacttcaaagcactt
aaaaatcacttgcggttttaaagttttaagagaattccccttttttgcca
aatatttcggcgccgattgtagCAAAATTCTTAAAGCTCTGATAAAATTA
TGAACTCAATTAAGGGACTGGAGTTAAGTGCTACATGTTACTTCGTAAGA
AAAGATTCAATAGATTTTTAAAAGTCGAATAATTGAAAGATGTATTATAA
TATAACTGTTGATCTATATGATATAAAATTTCGTGGAATAATATTTTCCT
ATAATATAAATGAATTAcctttaaaacataaaaattgaaaattaaagaaa
agttACCCCCGCATTAAAATTTTTACCGAGTCTAAATAGCAGAATaatgg
aaaattaaaaattagttGCCATTTTTAAAATTATCATACATTGGCTAAAC
AATATAGTATtggttttaaaaatattatcttGGATAAAACATAAAATGGC
TTTATCTATATCTAAAGCATATATATAGCTTCACGTGCTAAGGTCTTCAA
AaattggcactttgagcctcgaATTTTACTCAGCATTCTCTTATATTAAG
GGTGATTTGAGGTAGTCTTAACTCATTCTACTAAGTTTAGATTTTCTTAA
GAATCAATCATTCAAGGCTCAGGATTgtcctcaaattgttcttatttctt
gGCGCTTTTGAGCCTCGTTCGTGTTCTTAAAAACTATTCTTCTCGCTTAT
TCTTGTCAAACAGAAGTATTTTACCATCTTTTTCATGtaccttgaaaaaa
aatctctttgatcGATAATTAATGAGATAGTAGAAACTTCCCTGTGAAAA
ATATTACTGATGACAAGTATGACATAATGCTAATAAACACATTTAAAAAC
ATGTGCTGATAAGAGATTTGATAGATCTGTTAACAACAAGCTGACATCTA
TTCGTACATACTAATTATCAGTAATTTGGCAAACATGTTAGAATGAAAAG
ATTTCTAGTAAATTTTGAAGATTAGATCTATCCCTAGATTTTAAACCTTT
AAAATGAAAACTATGTAAAACTACGAAATTAAAACGTAAAATTAATATGA
CTAAAGGCAAATCTCAGGCCAAGTATTGCTTTAACGACCACTTCATTCTA
ACCTGAAGTCCACCATTCGCTATTTAATGCGTGCAATCTTTTTTTCTACC
ATTATGGAAACCGCTTGAAAGGAATCAGCCTTTACGCTAACATGGTTTTT
GTATGGTCGcgaaaaagagtgcacactaaAGCGAATTGACTTCAgaacat
aacgttgtttcaacattcatttAACGTTTTAATGGACGTTAGATATTATG
CTGTTTTGACATTTTGTGTCAGTCCGTTTGGTTTAGGCTTATTttgagta
catgttttttttttataagcattgcacttataagcatatctaggctcaga
tatgggaaaaaattaagcatatggcaagcattacttgagcctacgaaaaa
tgtttttttcctgattttagctttttttggctcgaattttacggattttc
agtatttccttaaatttaaggtttagatttaagcatcccctcaagcattt
ttcagcctttttaAGCTTTCGACCTGAGCATTTCGGagcctgttttcaaa
tttttgtatgcttataaataaaaaaacaagtatttaAATTCTAATTTCTA
AATTTGTTCTAAAGAAAAGAGTTAATGCTAAGATTTTAAGATTGCTAATA
ATTTACGTGTTGACAGAAAAAACAGTTTTTACAGACTTTGAAAGTCAAGA
AATGTCaaacaaaaatcacaaattttaacTACTACATAGCACATTGACCA
TTTTGACAGCATTTTATTCAATTGCTACAATTCCTTCTCTTTCCAAATAA
TTGACCCCACATTATAATGTAAGGGTCTACACCTTCAAACCTAGTGTTAA
ttaaaagtctaaaaaatagtattaaaaagataaattagtTCTTTGATATT
ATATTCCATGAATCTAACTGTTAGCAAATACAGTGATAtctcaaaaaaag
atattccaaTTTTGTAGTAATCTTGCCTTTTGAATCTTACATCATCTAAT
AATCAAGACTTTTCTCTAGATCTAAATTATTTGGAAAGCCACACATACCA
ACATTTCTACAAATTATTAAATTCATCCAATTTTGATCTCCAATCAGAAT
TCTGTTTGACTTCTTTACGTTTCGGTGTTTTCATAAACATCTTTTTAAAA
GAGTCCTTCTTAGATTCTTTATTAGAATCCTTTTCAACAACTTTTGTATC
GATTGGTGGTTGCTTTTTGCTCTTTCCTTCAAGAACACTAAATTGTTGCT
CAATCGGAACAACAGGCTCTGCAGATTCTCGTTCTGGTTGAGGAGAATCT
AGCATTGTTGNACAACAGGCTCTGCAGATTCTTGTTCTGGTTGAGGAGAA
TCTGGCATTGTTGATTCATCTTGCGGTGCTTCTATCACAGATCCCTTTTC
TGCCGGAGACTCTATCACAGATCTCTTTTCTGGTGGAGGTGATTCTAGAA
TTGCATAATCTGGATCTTCTGGTTGTGATATATTTTCATCTAGTTGTGAT
ATATTTTCATCTGGTTGTGATATGTTTTCATCAGGTTGTGATATGTTTTC
ATCAGGTTGGGATTCTTCAGGTTGGGATTCTTCAGGTGGTGGATCTTGAT
TAGTAGGCTCTTCTGGTTCTGGTGAGATTGATGTATGTGAATTTAGAGGT
GGAGATTCAATGTCTCCTGGGACAGATGAAATTTTCTCTGACTCAGGTGT
GTCTCCAGGGGCCTCATTTTCTGGCTCTTCACCATTTGATGGTAACGAAT
CTGAATCTTGTAATtcaacattttcatcttcaacaCTCAATTGCGTATTA
CCATCATCATCAGCATCATCAGTAacattttgttgttgttcaGCTTGGAG
TCTCAACTCCTGTAATTTCTCAGCTTCTTCTATTGTAATTTCATGAACAG
TAGTATAAGTGGCAAGGGCAGATGTAACAGGTCTGTTAATCTTTTTCAAA
TAGTTATCAGTGATTTTATCCACTACCAAAAGAATAGCTTTTTTAGGATC
AGTGCGGATTTGTTGGACCACTTCTCCATGAGACATTGCTTCAACATTGA
CTTCATTGACTTCGACAACGCGATCACCAACACATAATCCAGACTTCTCA
GCTGCGCTTCCTGAAAATTAGAGGCAAGATATTACACCCTTGTGTGGCTT
CTAGCACTACATTTATCATATCACAGAATTCTGCATATAAAATTAAAATA
GTGAGTTTCTGCCAAAAACGCAAAAGCCGTAGCGCCAAAATTAGGGCTAG
T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00045835TCONS_00045835Clytia hemisphaericatranscript
TCONS_00045836TCONS_00045836Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_102supercontigscaffold_102:232213..236413 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.28	0.25	0.47	0	16.75	14.57	8.83	9.13	3.88	4.09	3.78	2.37	2.89	2.22	3.22	2.7	2.98	3.31	2.64	2.41	2.22	3.3	1.24	2.45	1.52	2.47	5.69	3.76	6.04	7.28