XLOC_029215 (gene) - C. hemisphaerica

Overview
NameXLOC_029215
Unique NameXLOC_029215
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_100:863075..866849+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029215 ID=XLOC_029215|Name=XLOC_029215|organism=Clytia hemisphaerica|type=gene|length=3775bp|location=Sequence derived from alignment at scaffold_100:863075..866849+ (Clytia hemisphaerica)
GTGGAATAGGTATATTTTTAGTGTTTTAGATTGTATGAATTACTCAATGC
TTTGCAATGCTGATGTATTTTGCACATAGAAAAAAATATCAGATCACTGC
AAGAACCACAGTCAAAGTCTTGTATTTTTTTGTGGATGATAATAAAAAAC
TACTTTTGCAAAAGGTATGAGGAAATTTTTCACTTTGAGGTAACAATTCT
TGACTTCTAGGCTAGAGACCAAGTAGTAGTTTTATAGCTAAAATATTTTA
TAGCTATAAGATGAGGAAGGAATATCACATGTTAAATAAGATGGAGATTT
TAAGTCTATTATTTAACTTCTTGACGTCCCGCCGGCGAAATTTTGTGCTC
TCAGGGACGATATTTACGGCTGCCGGTAGTTTTGATTTAAgcattgaaaa
atctttaaaatgtgATATTTTAGCTTTTTGAAAGCGTCAACCTCAAAGAG
TTAACGAGCCAGGAAATGATTTTCAAAGCTAACTTTTGCTTATGGAAAAC
TAGTTTGACCCTTTCGGAttgcatttatcaaaaatactttCAGCTTCATG
TTAACTCCTTGACGTCCCACCAGCAAAATTTTGTGTTCTGAGAAACGATA
TTTTTGGCTGCTGCGGTTGTTTTGATTGATGAACAAATTCAGAAATCTGG
AAGTCTGGACAAATAGAGCtttgaaagagctttccaacggtaccaaACAT
TAAAGGGTTAGCTATCATTAAAGTCGAGATAACTCGATTCAAAGTGTAAG
CCTCGAAAACTCTTTATATTTTAGCTTTTTGAGAGCGTCAAGGAGTTAAA
CTCAAATATACAGTGGCTTCCTCAGTATATGAGGGTAAAAGCTGAGTGAA
AACTTCCCTATTGTGACATTATTCCTTTTTTTTATACAACAAGTATTATT
CAAAAGCATCTATCACCCGGTTTAAGTGTGAAAAATTGCTCAACCaagct
tctgctcatcctctagcgaaagaaaaattcttataaatataggaagtata
tctatagaggtctgcagTTCAGACTAGCGaccacctcactaaaaaccggg
actTTTCATCCCATtgattgcgtagaaaaaacgcgggtgacgtctagtat
aggccaTTTCCAGACCCGTTTATCTTATATATATTTCAGGTAAGATGAGT
TACCAGGACACTATCATTGGTGTTTTGCTCGATGTCTCTGGCTCCATGCG
ATGCAATATCAAAGGAAGACCAGAGGGTGACAAAGGATGGATTGGAGCAG
TTTTCAAATGTCTGGATAATTTATTGGATAATGATATTAAAGGCAATCAC
AAGATATTCGCTTTATGTGTTGGTGGGGCGGAAACAGGTGTTTTTGACCT
TttaaaaacattggaaaatgGTAGACAACAGGGAGAGCAGGGTTTCGAAT
CTATCAATTTGTCTCACGAGGAAGTGATTAGCTGGGCCTGTGTATTGTTG
GAAACAAATGGTGCCACCGAACTGCGCACTTGGGCTCCCATATGGAAACT
GAAACGTGAAGTATCCCGCGAAGATGCAAGAGCCGTGCTTCGACTTTTAA
CAAATCTTTTAGAAAACGGAGATGACAGCACGATGCGCAAAATTGTATTT
GATATCTTACCGAGAGCTTGTCGAGTACACGTACCCATTGTGGCAGATAT
TGCGAGATTCAAAAACAATCTTTTACAAATGGATGGTTCATTACAAGCTG
ATAATGAAGATATTGAGCGTGTCATAAGACAAATCAAAGATTTAGTGGTT
TCAAAAATAATACTCGACGAAAGCATTACCGCTTACAGCATTTCAAGAGC
TTCTTCTATCCTTCGAATGTCTACTGATAATAAAAAGGAGTTAACACAGC
AAGATATTGAGGAAATCTTATCCAAAGTAGAGCCCTATATTTATGGTGGC
ACCCCACTAAACGAAGCCTTAACCAAGTGCCACCGGTTTTTTTCATCGTC
ACAATTTCGCGGTCATCGGAAAATGTTGTTTGTCCTCTCAGATGGAGCCC
CTACCGATACCGCCACTCAAGCTCCGATAAAAGAAATGCACGATTCAGAA
ATCACTATCGTAAGCTGTTATATCACGCAAGATAACTTAAGGAATCCAAG
ACGACTATACGCAACTGAACAGCCAGAATGGAAAAGACAAGATGAGCCTT
TTTCCACATCAGGAGGCCTTTTGGGGCTTTTTGGTAATGTTTTGAATCAA
CTATTACAGAGCAATGGAGCATCGTTCATGTTTAACTTGAGTTCTTCTGT
TGAAACACAATCGATTCCAAGAACTATTTTCGTCAAGAAGGGCTGGACAG
TTGATGTCGAAAATAACCACGTCAAATTGTTTGCCCAGGTTAATCATCCT
GATCTTGTTAACGAAGTCACAGAATTGGCAAAGAATATTTTGTTTTGCCA
AGACGCTTTGTCTGATGTATTGACAACAATCGATCTCGACTTGTATATCA
ACCAAAAATTGAAAGGTTTTCAAGTCTCAAGACAAGTTGGCGGAGTCTGT
TTTGCACATGCGACAGCAACCGTTATGCATTTGGCCACTCACAGAATTGT
TGACAGATATCAGGGTCGTGTGCCTGCAGATTTCAACGTGTTCAATCGTG
GCTGCGCATACCCAGATTTTCACAAGCTCAAAGAGAAAATGATCGATCAA
TTCGGTAGAACACCTGAAGGAAATCTTCATGATGACGGAGCTTACACAGA
TGAAGTATTGAAGAAGACGTGTCCAAAACTCCGTCTCCAAGTGAGAGAAG
TCGACTTACAAGGTGCATTGGCTGCCGTCACAGCAAAACGACCTGTCGTC
ACAGACTTTGCACTAAACGCCCAACAATGGGACCAATTCTTCAGATTCTA
CCGAACCCAACCAACAGGTATTTTACCAAAAGAATTGATTCAAAATGCCC
ACCAACCGAAAGCAGAGCTCGAAGGGCACGCAGTAGTACTGATTGGTTTC
AATGGCAAATCACTTCAATTCATGAATTCATGGGGTACTGATTGGGGTGA
TAGTGGCTTTTTCCGTGTGTCTAATGATGGTGGCGTATTGCCTCTTCCTT
ATGTTAGGTTCTACGATGTGTATTGGACCCTTAATGATTTGTACCAATGC
GAAAAAGAAGCTTATCGAATAAAAGGAAGAGCTTTGGCTGAGTCTCATAT
CAACCGTTTAAAGAGCTTACAAGTTGCAACACATATGTGTCGTCTATGTC
ACAAATCTTCCAAAGTGATTGATTTCAAAGGGAATATGAAGGAGGTGACG
TGTCCAAAGTGCTACCGCAAATTCCCAATGAAAAACGCGGGACCAGATAT
CTTGTTGGCCGTTTATTTGGCTTTGCTACAAGTAAAAGAAAGCAAATGAA
ATggaaaataaaactttatcTTCATATTAACAGAAAAACTAGCAAGGGAT
TTGCTCGCGTATTATAACATTATACAGGACCAGCAACGTTAAatacttaa
aaatattttttatttcaatagtCATTTTCATGATCATTCTTATGTATATT
TAATTTTACACATTATTTCGACCTGTCTTGTTTTATATCCATGGCAATGG
AACTGAGATTCCAGATTTTCCCAACCCTTACACAAGGACTGATGCCAGGT
TTCAAAAAGACTAAGAGTGAAACTATGCCCGTGCCTCTTATATGTCTCGT
TAGAACACATCATCATTTCTAGCTGATTGATTAACAAAGCCCTAATCAGA
ACacatcaaaatttctagctcaAATATACTCTTGAAACATCGGGAAAAAA
GGTCGTCTCACCTGCTGCTTTCGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00045711TCONS_00045711Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00045711-proteinTCONS_00045711-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_100supercontigscaffold_100:863075..866849 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.01	0.01	0	0	0.07	0.01	0.02	0.1	0.02	0.07	0.06	0.01	6.57	4.96	0.03	0	0.04	0.01	2.23	0.35	0	0.02	0	0	0.01	0	0	0	0.03	0