XLOC_029212 (gene) - C. hemisphaerica

Overview
NameXLOC_029212
Unique NameXLOC_029212
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_100:820439..829059+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029212 ID=XLOC_029212|Name=XLOC_029212|organism=Clytia hemisphaerica|type=gene|length=8621bp|location=Sequence derived from alignment at scaffold_100:820439..829059+ (Clytia hemisphaerica)
AATAACAGGTAACATATTTGTTTACTTGGAAAGTACGTCCTTTAGACAAC CTATTGCCGTACTTATGATAGAGTAAAGTCAAGCGTTATAAATTATATAT TTGGCGCTTTCGTTCGCCGTGTTTTTTTTCCCGCTGAGTTAATTACCCAT AAATCTCGTGAAAATGCTTTTTGGTGGATTGGTTTGATAAATTAGATCGT TATATATCTGTACCAGACACAAAACAACGCGCATCACAATATACATAAAT GTCATATGGATGTCAAAGCGACAGATTTTTCTTAATTGCCCTTACACTTT GGTCAAAACTGAActacatgttcttataaaatatatgatATGCAGTGCTG ATGAGTcttaataaggacgaaatgcatatgctgctcttcCACCCAGTCTC CTAAAAGAAGATAGTTagacagaaattctttgaatttttcatatatGTAT TGTTTCTTAGGCATGTCATCAGAATTGCCGACACCACACGATCATTACAC AATGTTTGATTCCGATGAGGACATTGATCCTTCTCCGGGTAGCATCGCCG ATCAACCAAGAAGTATACGGTCAAGTACAAGGAAACTGAGGGAGGGATGG CGGGGCTCTAACGAGAAACCTTCTATTCACCACATACCAATCAGTACGGT TTACAAGgtgattgttttttctttttagcgagattatgtatcggagatat tctacggctacggttgcggggctgcctgTACGGGTCGTCAACAAAGGCGA CATgccgttgtctactttgctctgtacgggaaaaacaccaaaacaccatA TAAggaaagtcgacataatgccgtacgtcaaatatcgaacttgctttcac ccgccattacttgccttactcgccatttccctcgccactttagccgtagc cgcagagaattccagatacataatctgtGCGTGTGCAGCCTAGCTAACTA AGTCTGTATTCACAAGGGTAAGACACACAGCTTGTGATATTGTACCGTTT TTCAgtactttaaagattttttatatctacggatttttaagtttgccttg gaatacttaTTCAGTATGATATACTTATAGTTATTCAGTCATAactaacc atcagatttatcctagtgactgaatcaagCTAGCTTAAATTTCTAGGCTA TAGCGTGTGTGTGTCGAGAGCACGAGTTAGAAGATAGAGAAAGAAGGCAA ACGCAAAGATTTCCTTTATCCTAGGATAGGATAAACCTGCTAACTACAGC CCCAACATGTTCGAatagactttttgataaattattttgagcataacgaa tgcctcgttttgaaaccatcaCCAAAGTCATTAAATCCTTTGAATCTTTA AGTGGTACTCTTAAAAGTAGAATAAACTTCTTATGAACTGGgaaattacc atagcaatattttgaaaacgaggtaagcgttgcccatgacgtaatttatg aaacggTCTATTGAGTgaggttaaaaaaaaacatgtcggattcatttttc gatggccgaaatTTGCGAAGCGAGATTTTCTAATTATTAAACCTTTATCC CATCGTTTATACAGGACCGTCCAAGCCCAATGGCAAGCCGACATCGAAAC TCTACGAATTCTATTGCTAGTAAGTCAACTAAGAACTTGGAAGCTATTCg gaagaaaaaagaatcaaagagtTTGTTGTCGAGAGTAAAATCCTTATGAC TTCAAACGAGTCATATCTAGGGAAATTTCACTTTACTAACAAGTACACCA GAAACCCCTCTGTAATTTGAATCTCTTCGTAATTCGAATTCTTTAGATTT TTCCATTCAATGTCGAATTAAAAGCTCATCCGCTGTGATACTGTGTCACT TTGTCGAAGTTACTTTTATCATGGATACATGGTGTTCTAAATCTAGGCTT AGAACGTCATGTCATGCCTGGCTACCACTTTTTTGAGATATTCTATCGTT CTTTTTATATTTGTCGCCTAGGTAACACATACAGTCCACCGAGTAATCCG TACCCAATTGCATCCGCATCAGCAGAAGAATTGCTTTATCAAGATCAACC AAAAACATTCCCTAATCAaggttaaaaattaataaaaattggTTAACTGA TATTAACCACTGGCGTGTATATCTTTCGCTCTGATAACGACTTTCTGTTG GTCTaaaattttgggtttttttctcgTCTAACCAACGGGAAGCCGTTATG GGGGCGCCAACAGtcttgattacccatgattcatttcgatcGTGAAATGG CCTAATTAGACCTTGGGCTAAGTTATATTCGTCATCTTTTATCGGAGATA TAGAAAATTTGTACCCAGTAGGCGTGGGTACGTCGTATTCATTACCGAAT TTATGTATGTGTTTTTTACTGGAatggagacggtaaggttctaatttgtc tacatctggatgacggtaaatcagcacttttaccgtcctcaaaagtgcaa atacataaacatGGTATTCTCCATCACATTCGGGCAACACCAACATTGAG TAGTGTCGCCATTAGGGTACCTATTTTCAAAatactccgatcaaagattt tggtgGGTCGGCTCGGGTTTGAGAAACTACCTCCAGGGTTTATATAAATA CATTTTCTCCTCTCTCCAATACGCGTAATAAATGGTAGATAAAAATTTAA ACCACAGAGCCTGGACACTGACACCACCATCTTGCTGCTCTGTGAGTGTC CATAATAACTGAAATGTCTCTGATTGGAAAGTTAAATGGTAATAAGCATC AAGGCTTTTGCATACCTTCCTTACATAGTAATAAGACGAGACACTAGACA TGCCAAGACAAGACATTCCCAACCGggaattcatgatatacaccattgta atgtcttctgacattacatcacggacacaacagctgattggttgcaagtg acgtattgactgattttaccaATAAGCTGtcgggtccgtgatgtaatttg aaaagacattgcaatggtgtgaGTGTGTTATGTGTGTTTATATCCCAGGT CGGGCTCCTAATTAAGGGGAGTCACTTATTTGAGGGAATTTCGAACGGCG GTTCGGTTCGGTTCTCTCAGAAACTTCGACGACCGTCTGGTAACCTCGAC GGCGGCCTGGTTTCAACCCTAAAAGTGTCTCAGGTCGGGTCCTACTCGAG GGGAGTCACTTCTTTGAGGGAATTTCGAACGGCGGTTCGGTTCTCTCAGA AACCTTGACGGCGGTCTGGTTTCAACCCTAAAAGTGTCTCAGGTCGGGTC CTACTCAAGGGGAGTCACTTCTTTGAGGGAATTTCGAACGTCGGTTCGGT TCTCTCAGAAACCTTGACGGCGGTCTGGTTTCAACCCTAAAAGTGTCTCA GGTCGGGTCCTACTCAAGGGGAGTCACTTCTTTGAGGGAATTTCGAACGG CGGTTCGGTTCTCTCAGAAACCTTGACGGCGGTCTGGTTTCAACCCTAAA AGTGTCTCAGGTCGGGTCCTACTCAAGGGGAGTCACTTCTTTGAGGGAAT TTCGAACGGCGGTTCGGTTCTCTCAGAAACCTTGACGGCGGTCTGGTTTC AACCCTAAAGGTGTCTCAGGTCGGGTCCTATTCAAGGGGAGTCACTTCTC TGAGGGAATTTCGAACGGCGAATCGGTTCTCTCAGAAACCTTGACGGCGG TCTGGTTTCAACCCTAAAAGTGACTCTGAGATCGATGTGTGAGTGTATTG TGTGAGGTAGGTTTTATcgtttcctagggatttttctaagcttTATAGTT AAGTTACATTCATTGTATTACTTTAGACTGGAATTATCTAATTGAAATTT TAAGGGAATTTAGGGGTACCTGGTTCCCAGATAGCTAGGTGGTAGTTGGG TTTCAGTCCTCAATATGGTGGGCTAGAAAGCTGGCAAGATTATCATAGTT TGTATTATATCGCAGGCTGagttctttttataatagaatATGACAGGTAG TTGCTTGGCTCACGTGGTACAGGGCAAGTTTTTCATCACTACCTCTCACA ACGCTCAGTGCTTTGGTCGCGTGATGCAGggacaatttatttatttttgt gtgtattcttctttttctgtaTCTGCTTCATTTTTAATGGTACTAGGTTA TTGGCAAGTAAGAATATCAATAGAACTACCAGTGGCTAGATCTAATTGTA TATAGTCGTTTAATTAATTTAGATTTCATCATATTTAGGATTTGTcatat ttaactttttattttttattgattatttCCTCTCTTTTATTGTTATGTTG TCTGGTCAGTCTGCAACCATTGTCCCGCCATTGTCTTGTTTTGGGGATAC CTTCGGTTGGgactaaattttccccaaaactgtTTATGGGTTAGCCAAAC ATGTGAACGCCAAACTTAATTGAAAAATGTCTCAATCTATTCTACTCCCC TCCAAACAGATGaacgaatttggaaattaaatgtttatttaACAATAGTT AAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCGCCTGCAAGTAGCCTTAC TTCTCACTTGGTTCCGTGCGATATTGGCTATACTCTCAAAGCACAAACAA GGTTTAAGATGGCGGTGTTCAAGTCTCATAAattttttacctccctcccG CCCTACAGATATTGGTTGCCGGCAACCCTATTTCTAGTTTATGTTAGTTT ATCACTAGCAGGGGgactaaattttccccaaaactgtTTATGGGTTAGCC AAACATGTGAACGCCAAACTTAATTGAAAAATGTCTCAATCTATTCTACT CCCCTCCAAACAGATGaacgaatttggaaattaaatgtttatttaACAAT AGTTAAANTTCTACTCCCCTCCAAACAGATGaacgaatttggaaattaaa cCTAAGGTTTCCGTCCATATTCACAAAACCTAGTTGCCACACTGTATATA TGGTCAAACATCCAAGGAAttcgtttttacatttttcccCACAGTTTCAG CACACAATTTCGAATCGAAAACAATGATGTACAAAGACAGTACCGAATCT CTAGGAGGCCGAaaagtaagtcatttttctGCTGAAATACAATGGATTTT TTCGTTGGAGAAAATTCACAATCGACGGTATTGGTCATAATGATGCCTAT TTGAGCATAGTTCGTATAAGAAACCCCGATCTAGAAgacttttgtttctt tctattgtttctaaATTTAGCTTGCGTTGAGAAAtgagtttgttttgctc actttttgaccaTGTGATTAAGTGTTAAACCAATCTCAAGAGGagtattt ggtaacgtgatcaaaaactgagcaaatcgattttatGAGCGTTGATAACG aagaaaaagttaacaaaaagttacaacaatAAGCCTCCAGACCATGATTC AAGGAAAGTGATTTTTCTACGAATATCTGATAATTCATACTTACACCTGC ACAACTAGTTTTTTTCTCCTAGCTGtattgtttaaaattaagtaagccaa tagtttgtttttgtttcgattcgTAACTAAAATGGTTAACTaaaatggaa tttcttaatgaaaattatgtCAATGATATATAGCTCATATAGAAGCTCAA CACTTAGTGTAttgagcactctggtgacaaTAGCAGTCTAAGCTCGCTTA CCAGAGCTGCACTgatgagtcctgggaaggacgaaacacgtgtctgcggA TAAAAATGTCAATAATATGTATCATAAATGGAATATTTCTCTTGTCTGTT TAGGAGGGAGGGCATCGGCGAACGAAATCTGAAGGAGGAGGTCTGGTGAC CACTTCACAAAATTTCATATCCATTACACCACAGCTGGAAAACACTGTAA GAAAAGTTACTTATTCTTTAGCGCCAATAATGATCTTATTAATCTAGCTC TGTATGAACCCCTGTTTGTTCCAAAAGGTTTTGGAATATTTTGGTGAAGG TAACGGTTATTTTGGTCTGGTCTGAATCTAGAGTAAGCTAGTTTATAGAC ATATTTTACTGCCACTGAAAATCTTAATTACCTTGTTTTACTACAGGAGA AGACATTATTCTGTGAGCCAATCTCAGAGAAGTTGAtctgtttactttgt aaaagtGTATTTCGTGAGCCTGTCATCACCAATTGTGGGGTATGTAGCAA ATTTATCAttaagtacactttttttataagaacatgacaATTTTTTGGAG CCTCgttaagtacacgtttttttataagaacatcaaaaattttgttttgt gttttagagtccacattAGCCAGTGCCTTCCAACAAacgaaattttttct ttgttttatggttaaattgcgataaaaaagcggttttcgtgtaACAGGCC AAGTCCACATATGCTATTCCAGGAAGCAATTTATACTTTCCCCCGTGTTA AGGAGGGCATATTTTCTTTCCGGGACAGGGGGGTACCTtcttaaaacttg aaaatttagaGGCTCCGTGGTACTTTGTCAAATAATCGAAGGGGCCTTGA TGTATAATATACGTAAACTGCCAAATGTCAATTATTTCTTTCGAGGTTAA TTTCACAGGTTTCATAAGCCAGTAATAACGCTTATCACCTCCAAACCGCA ATGTCCTCACTTTATTAAAGTCAGAAGTCATGTAACTTGAACGAAACACA AACCAGAAAAGCCTGCTAATCTGAGGTGACGAAAGTTACTCCTCACTTAT GAATCTAACCCACTGGCccttatataccctggaccaaggtatatccgcca tctttgatcagagtttttagaaaagtggtacccttTAGTTGCACTACTCG ATGAGGGTTGATTTGTGGTTCAATGAAATTTTCCGTTTAAAAATcttacc attagggtaccactttcaaaaaaactccgatcaaaggtTTTGTCTGGCCA GGATCGAGAAAATGcttccagggtatataaaggtcatcGATCTAACCCCA TTTGACGGTAATTATCTGAAAATCTAAGCTATAATGctatatttttgttt gttttcagcatACATTTTGTCGACAATGTGTGTTATCAGCTGCCAAAGGT ACTAcatattttctttgtttgaaattCTACACATTCGTTCCAACCCATCT TTACTTACATTTGTAATAACCTTTCACTTGACCAAGAAATTCCAAATATT TGAGTAAGAGGAAGATTTGGGTAAATTAACTGTTTAAAGTCCGTTTTCCG TCTCAAATGGAAagtttgctttgaccactgctttacataagaaattgaga aaacaCATCCTCCCTTTGACGAGAACCTCTTATCTTATGTTTTCATGTAG AGTATCTCATTNTACTACATATTTTCtgtgtttgaaattttacacattCG TTCCAACCCATCTTTACTTACATTTGTAATAACCTTTCACTTGACCAATA AATTCCAAATATTTAAGTAAGAGGAAGATTTGGGTAAATTAACTGTTTAA AGtccattttccgtctcaaaTGGAAagtttgctttgaccactgctttaca taagaaattgagaaaacaCATTCTTCCTTTGACGAGAACCTCTTATGTTT GCATGTAGAGTTTCTCATTATTCATCTCATTTGTTTGCTTTGCATTGTTC TTCATCTTTAGAATCAACTTGTCCAACAGATGGAACTCAACTTTCTGTCG GTCCCGTAAATATTGCTGTAAGTTTAAATTATATTAGTTTTAAGTGGGTG ATATCTTTTTGCTTCAGTGCTAAAAGCTTTTCCACCTCAGTGAAGTATAC GAAGAGCCTTTTTCgtctcaaaatttcaagaaaatgtgCGAGTTTGTTGT GTAAAATCTATGTTCCGTCAAACAAAAgaccttgctttgaccactgttgt tactttgtaaaaaccatCCTGAAGGGGATTGGTCTAGTTGCTCAGGTGTG GTTTCCACATGATAGCGGAAAAGAGGACATGCTTAAAGCGAATCGACTTT GGTTGTAATGTTTTAAGAGGCGATACAAACCTCTCTGCATGTGTTGATAC TGAGAGAATTTCTAAAATTCAAAGAAGACACAAAAACTGCAAAATCTATC TCATTAAAGTGACCAAGCTATTATCTGCAGTatacaaaaaaagtttattc TTCTCAGACGGATCTCCGCCGGGGAGGGGGGGACCAGGGCAAAAAGGGGT ACaggatgtgccgctggtcagggaaccttttttcacctccatGAGTCCCA TGTAGgctcgcaaaaacaccaaaatagaaaactcagtccctcgtagggta cctttttagGGGAATTTGGTGGAAATAAGGAAAAGTGGAAAATTTCgaaa acattttggaatttgagtcccattcagggtcactttttttgcgaatctta tttttcaaaatacgaGTTCCACGTATGGTCATTTTTTTCGAACCCCTTCT TTCTGATTTCATCCTTTCTTTCAATCAGCAGATCCGTGATCAAGTGGGTG AATTACTGATCCATTGCAAATATGGTTGTTCACCAGCATCTTCGGGTGTT CCTGGTGAATATGAAATCGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00045708TCONS_00045708Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00045708-proteinTCONS_00045708-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_100supercontigscaffold_100:820439..829059 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.15 5.89 3.86 3.78 22.83 19.06 19.77 20.74 12.86 15.8 12.73 13.39 18.3 20.54 18.07 20.6 18.19 17.68 22.13 26.55 8.79 9.9 13.79 15.09 10.86 10.83 7.47 6.3 11.16 13.26