XLOC_029198 (gene) - C. hemisphaerica

Overview
NameXLOC_029198
Unique NameXLOC_029198
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_100:402444..408568+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029198 ID=XLOC_029198|Name=XLOC_029198|organism=Clytia hemisphaerica|type=gene|length=6125bp|location=Sequence derived from alignment at scaffold_100:402444..408568+ (Clytia hemisphaerica)
TGCCCTCAATTCAAGCTTTTTACAGTGATACCTGCGCTGAAGTGAAGTTT GTTGTCGAAATTATACAATCATTCGCTAAATTGAACGTGACAGTATTTGG GAGACAACAACCGATGCTTGACTTAGATGGGACCAACATTGTTCTTTACT TACCCAAAAGAATAAATAGATCACAAGAGCTGACAGACAATTTGAGCTTC TTTCAGCGTAAGGTCAAGGATATTTCGGATGACAATGACACTGAAATTAA ATATGCTGTGCAGCTGACATCGTTTCATCCAGTTACTTTTGAATGTCCAG TTATACAAAAGTTAAAAGACAGAAGAACAATTGTGAATGATCTTCTTAGC AAGGAAGGAAGCCTTCTCAAACTGTGCACCGTTCATGTGGAGAGACCAAA AATATTACCTGAAACCAGTTCTGATGTTACTGATGAGAAGTTTGAGCTGA AAATCAGTTGTCCACTCTCTCATACGGAGGAATGTCCCAGAGAAAAAGTG TCTTGGATCCACGATGAATGCAAGAAAATTATTAAGTACCAGGTCCTTTG GAAACGTCTCAAATGTGATTGTGGCACGTTTGATCCACGAGATGCAACAT TCAGATGCAGTGACCCCAACCATGGAATAAAGTATTGCCAACCTAACGAG CATTCCTTTGAAGAAATGTCGAAGCTAAAGAAAAAGATCACGAATATATT AATCGTAGGAGAAACTGGTGTGGGGAAATCGACTTGGATCAATTCGATCG CCAAGTACCTTCTGTATGATACTTTGGAAGAGGCGATGAAGTTGAATGAA AACACTGCTATCATTCCATCACACTTTTCACATACCAATGAAGAAGGTGA AACAGTTGATGTTAAGATCGGGGACTTCAAAGGGTATGATAATGAGGACA CAACGGCATCGTCAACTCAGAAACCAACTTCGTATCTCTTTGACATTGAC GACGAAAACCAAGTGAAGCTGATTGATACACCAGGTATCGGAGATACTCG TGGGATCAAAAAggataatgaaaattttgatatgattCTCCATCATATGT CATACTTTACCGAAATAAATGGTATTTGCATTTTACTGAAACCAAATACT GCAAGACTTGGAATAATGCTGAGGTTTTGTATCGGAGAATTATTGACCCA TCTTCATAAATCTGCTGCTCATAACATTATGTTCTGTTTCACAAACTGTC GTGGAACATTTTATCAGCCTGGAGAAACACTTCCTGTACTAAAGAAAATG TTGGAAAACTACAAGGAAAGCAACGTCAGAATCACCAAAGAAAATCGTTT TTGTTTCGACAACGAATCGTTTAGATTACTTGCCTGCCTCCAAAATGGTA TCAAATTTAGTCCAGAGGATATAAAGGCCTACTCAGCAAGTTGGCAAAGA GCTGCATCTGAAACACATAAGTTGTTTCAATATGTTTTCAAACTCAAGCC ACATAAAACAGATGAAACTTTGAGCTTGAACGACACACGCAAATGGATTG TTGAATTGAGCAGACCGATAGCTGAGATCCAAGAATCGATCCAAGACCGA ATTGTGCAAGTGgaaaacaagaagaaggagctggaAGATATGAAAGACGG TGCTAAAGATTTTGATGAGCTTGAAAGATTAAGTGAAATCACTGTCTGGA CTCCGAAAGTTGTCAATTTAGATTACCCCAGAACAATATGTCGTCATAGA AATTGTACTGAAGCTATAAAGGTAGGTTcttattttctcaattttcacaa ttttcataaaattttatgcttccgaaaaaacagtttttaagcGCTCTGAC CATCATTATTGATTTAGAgagtgtcccgaaaaaaaaaaattctgctaGAC CATTTCTATAAATTcgacaagagccgcaaagatgcggataaatatttcct ttacaaatgataaaataGTTATTGATGTCCTTAATAGATTAAAGTGCTTT ATCTCAGATAACACCAAGTGATAACacacaagtccctaagaatttcaaaa ttccattcatGTAATAAATTGCCAGTATTTATAGGATTATTTCTAAGATA CCTTAtctgggaaaaaaatgtcgggtgaaagtgacgaaaattttgagggg gtgacgaaattttcccccgacgaattttttccccgatattttatcacccg accaaaactttgacccgatttttttatccatgaccaaaacttttaccaaa ttttaaaactcaaaccaaaattaaaatctagttttcctgcacctttatta accgaaattagtgctctGTCCAAAACTTTAGCgctttttgtaaataaact tgCAAACTTCCTATCAGCAAATATAGTAAAAATATCAACCTTCTGCAAGC AAAGCAAAGATTTCAATTTCTTCACAGTAAAAATTGCATCTAAAATCAGA CTGGAGGATGTTTTCTTAGCCTGGTTGTCGATttttaaaccaataaaatt gGAGAAGTGAAGAGCTGAAGCTGTAGCTTGCTCCACACACGGATCTATAT CTGAAATCAAAACAGCAGTTAATTTCATAATGGCGGAATAGAGCCACACA GCCGTGTATAAACAATGGATTGAaagtcattttttaaaatttaaagcaCA ATCAGTGATCATAAAAATGACAGACTACAAAACCTGCAATATTTgctatc attttcaaagttttcatggaATTTCATAGCACTTTTAGCAGATAGCATCT ACAGCATTTATAGTAAGTGAAACATAAATAGGCccttaaacgtcgaatta caagatctttttcgagctagtgaaggaaaccatttcatttggacaattta gttgggtaaaagtgactaaattgtaaatttcgatggggaaaagtgacgaa tttgaaattttggtcgggggaaagtgacgaaaatgcctctagatgacgaa atttttccctgtcgaaaaaaaaaacgaccCCGACCATTTCAAGCCTATAA Actttcttaacatattcttattttcagcattttttaagtaattttgtcca ttttcctaagaaaacaagtgttttagagcccacaaagtcttaaaatagcc ttaaaatgttcttaattcgTTCTTTAAGATTTTCGCCACCGatgccttat gtttttatatagtttgttcttatgaaaaaaacggGTGTGATGTGGTGCGT CTTTTCGGGTGCGATGCGCAAGGTTGTAAGTTAAATCCCCAGTCGTATAA TACCAGAGGCTTTGTACTTAGGGTATATTCactattgagtttaaagcccg agtGGCTAGAGTAGAATTTATaatctttcccaggcaagaaaaagtaaagc cacttatttcccatccagaacgcgcctagaacgcgctGCAATCATGATGA CGGATTgaaccattttttttttgaaatctagtgaTAGATAGATTTCAAGC CGGCGTTTGTGCTATAACgacacgcgcgggcgttctggctGTGAAATATC ATCAAATGCTTTTATGGTAAAACAATATTTCTATCAGTGAGAAGGCAATC CTTGAAGTGTGTACATCAAAGTGAATTCTCGTTttatttcgaaaagtttt ttaagTTCATTCTTTAAACATTTCAAGTTACTTCAAATCTACGCCAAAGA AACAAAGGCAATGATTACTATCGCTTGAACATTTTACTTACATCAGCAAG AAGTACTACTAGTGTATTTCAAGCTAATGGTCTTAACGTGtttgaatcct aaaaatttttctGTCGATAGAACGAGGAAAGTCtaggaaagaaaataatt tttactacGTCTTTCTGATGTACGCGAAGCGTTCAAGCGAGTGTAATCAT TGCTTTTGTTTCTCTGGTGTAGGTTTTCAATCACTtgaaacgttgaaaca atgaaCTTAAATTACCTAACGGTTCAAAATACAACGAATTCACGTCGATA TACACACTTCATGGTTGTCTTCTCACTGATAAAAGTATTGTTTTACCATT AAGGGGACGTGCAGGGTTTGCGATTTctgaaataccgaataatttcgCTA cgtaaaatttccgaaattctgtaaaaaaaatacttgcaattccgataccg atttctTTGGGTAATTTTCCtcattttgactaatttttcatcaaatttga ttttttatgtatgaattccgaaaaagggggataaaaacctTATGATACGG AAATTCCGAAGCagaaattcatggatttccgataccgaaacaatttcagc attccgaaatacataataaaagaatataataaaatttaataaaatgcatt aaaaatgtcGACACTCTTCTTAGAGGTAGGATTAaaaggaaggtcggaat cactgatagaaaaaaaaaatttcctctctgacCGTTTATTAGcgatcagc gattccgaccatTTATTATCCCAAGTTTGGAGAAAGATCATTAGATCTAC TTACTGTACACTGTCTTATTACCGTGAAAAACACAGGCCGAAATCATAGA TTGACCTGTgtcgaccaatccagattctatttagcgcgcaatcaacgcaa agaaaagtaaccatgatcttggatgaagttcaaagttgatattttaattc ccgtcgttgaaaacacaactcaaaagtGTCATCAATGCTTATTAAAAAGA GTCAGttatagagaatcataacataaattaaagtctgtctattatttcga ttcaattaaagtaacGTTTCcaaaattaatagtttagtaattactgttct atacatttggggatcatgtaaaagatttctttcgaaaaaagctcatttca attacacttggaggtttctggggaattcataagtagtaaactgcatactg atacagtctgctagacattaatatggtaatattttctcttcatctttgat tctttctaccagtgattagattgacacatgcgcgataaaatttctattat ttatcTTCAGAGGTTGAGACATTCTTTGAagactcaacctctgatactca gagTCCTATATAATTGGACATTTATTGGAGTTTATTTGTTAATAGGTCCA TGGAGCTGAAATATTGCAAACTCCAAAGCCGTGCCATGATCACTGTTATA TTGACAGTGTGACGCCTGGAAGACCAGGTGATCCTGAGCTCCGTCATTGC ATATGCTTCATCGACAAGCTGACATGTAACGTATGCGGTCATCATAGAGG AGAGCATCAACATGTCAAATACTACACTATCAAAGTCCCAACTAAAACAA TCGACCCTAAAACGAAACAAATGAttgcaaagaaaaaagataaagctACA ATCGTTGTTAAGGTTATTACAGATCACAATGAAAGAATCGAGGCAGAAAA TCAGGAAATGAAGACCATCATGGAAATCAGTGCTACGTTTGCTTGTTTCT TAACAAGTTGCTCCCTGGCATGTCATAATGATGGTGTCAAAGATCACTTG GATTACCTCATTGATGAGAAAACCAAACtgggagaaaaagaaaaagtcaa agaattgatcaaaatgaaaaaggagTACGAAACGCAAAAGGAGATCATAG AAAAAGCCATTAAATCGTCTACTATGCAGAAAACTAAATACGATATTGAT GTTGAAGGTGCGGCAAAACTTAAAGCACAGCTTTTTCAATTAAAATACAA TGGTCAAACCTTCAAAAAGATGAGTGAAGATATAGCAAGGGTCGAAGCTG ATTATAATTACAAGGAAGTTACATACATCACCAGCACCAAGGCTAAGCGT CTAAAAGGGAAACAAAATAATTCACATTATTTGCACCAAAACAACACAGC CCAAGGAGTATCTTATAATCACTCTCCACCTCCTCCTTATAATCATCATT ATGGATACCCTGAACAAAGATCACAATACAATCAACCAGGGATGAACCGG ATGAACCGTAGGAATAACAACCGACAAGTGGAAAACCAAGaggaaaactt tttcaaaaggatCACATATTTTGTTTTCGGCCAATGAGAACAAAAAGGTA AACttgtttctttttgtatttttacacccttttttataagaatggccaaa aaattaagaatatgctaagaatatcacgaTCATAAAATTTGGTAATATAA CGTAATAATACCATTTTTATAGCATTCTCAACTGTAAATTTCCAATTATC CCTCAAAAAAGCTCAATACTTTCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00045674TCONS_00045674Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00045674-proteinTCONS_00045674-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_100supercontigscaffold_100:402444..408568 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0.07 0.12 0.04 0.02 0 0 0.03 0.08 0.03 0.4 0.02 13.43 11.9 104.11 105.05 18.3 15.23 51.38 50.57 1.67 1.36 4.36 5.1 0.06 0 1.71 3.21 38.08 41.31