XLOC_029186 (gene) - C. hemisphaerica

Overview
NameXLOC_029186
Unique NameXLOC_029186
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_100:115817..127611+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029186 ID=XLOC_029186|Name=XLOC_029186|organism=Clytia hemisphaerica|type=gene|length=11795bp|location=Sequence derived from alignment at scaffold_100:115817..127611+ (Clytia hemisphaerica)
ATCTCCACTATTGGAAGCTATCGTTAGTGATTCTACTTTCCAAAACACGT TTTCTTGATTGAAGAAGGTTTTGGAGGGAAAGGTTgtaaaaaatggctaa aatacCTGAAGAACACGAAGATCCTGCACTAACCTTACTGGCTCTACAAC AGGGACAACCTGCAAGTGATGGcattattaaaaaagaaagtcCAGTCTCC AATATTTTACCTATCGCTAAGCTTGAAGGCagagattttgaatatttagt tcgtcaaaataaaatttctattggaCGAAATAGTAAACTTGGAGATGTCG ATATAAATATGGGACATTCTAGTTTTATATCAAGAAGACATTTAGAAATT CGATACGAACTTCCTGAATTTTATCTATTAACCCGTGGAAAGAATGGAGT ATTTGTTGATGGTCATTTTCATAGGAAAGGATCTGAGAAAGtaaaactaa acaaaaagtAAGCTGTTTGCTCTTTTATACCAGACGTCCGCACTCGATTG GATCGATCATctgaacggctcgatgacggatcgatatgtgatcaatggat tacttaacaatccggataggagatcgatggaagattcagccattaaaaag tcttgagtatcgatccttcgttgatccattatcgagctagtatttcaatc gagtataccgattcgtcatgaatcgttaatcgattcgtcatcgatcgtta atcgatttgttatcgatcgttaatcgatttgttatcgatcgtaaatcgag tatgagtcgataagGTCGATAAGATAAGATTGATAAAAGATcaatgatag atcgataaataatcgataactaatcataagcttaaaaaatcttgagtatc gatcctctatcgatctcctatccggatcgttgtgtaatccatcgatcaca tatcgatccgtcatcgagccgttccgatgatcgatcctatcgagcgcgga cgtctggtttATAAAACGTTTAGGAGAGCGCAACATTCTATTAAATAATA AATTATTCCAGCATACATTACTTTCACCCCAGCCAGTACTAACAGGGATG AATTATCTTGTCCCTTGGTAAAAGCTGTGTTGTAAACGACAAATCAATTA AATGACATTATTATTAACAAAATTTATGCTTgaagtaattagttattcaa aaggcTGTTGCATTTTCTCAAAGGACtattaccgtgagtggtcctaaatc tgacagccctgtctaaatccgatggggtcttgcaaagatacaaactaaat aaaaacaaacctttcgctgtgacgcaatgaagataccaaagtgtcaacta aactgagagatttgatacactgactcaattgaaccaaaacattaattgct tcttatacaaagcataattttttattacaaaactgttaacATTTTAAACA CAAGCAACAGAATAATacaggtaattatttttacaactcacacttttttt atcacattaattttgacattttagtcatcttgttaaATGTTTTGGGTTGA GAGTTCTTGCATTATAGTTtaattgttcaacttggagagggagtTTGTAA acgtagaatttttttcatagcagttatttggggggtcaaATTTAGgaagg gctgtcggatttaagGCCACTCAGGGTTATGTCAATGGTCATTTGGTTTG GGAGACAGGCcaccatttgatttgagttaatgaacggcgtattaaaaaat tgcacgatttctcttttgcactgagtaggcttttaaatcgaaatatgaaa aaatccgtagtggaacacacgggATTGGCAAACGNCGATTTCTCTCTTGC ACTGAGtaggctttttaaaaaaatcgaaatatgaaaaaatcatatcatcc accaggatacATCCTGTCTTATTTtacccctattttctactttcctatct tttatcctaattttctgtctttctcgagtgtttctaactgttttctaagt atttttctgaaatttgcccgttcCGGTGAAATAGGTCTCTGACCCCGGCT caaaccaccaaatgcaagcaaccttggtttccaaacccaatgcctaactG CTTGCGAAAATGAGACACGGCATACAAattgtcattcacaaatacttata gcgtgtaatttacagagcTTTATTAaaaaagctcccaaccctactgGTGC CCCGTACAAAGATCCCTATGGGATCCTAAGTTAGGTCTCAGTGTACGGAT GCCCCTAAGCacggaggtataaagaaacaggagaagtacgCTATTgcaac caagctcgccctacgaaaaaaaagttacgatgtatgtatGCTCATAATCT TTTATATCGTGCATTTtcaatgagctcttttatccattggtgaaatctta ttggatcattgaagctttaaaaattagttgagccaagattcattgtttct gaaatcagtgtaagaaaaaatttagactaaaaaaaggcctgtaaacttgg caatccctcgtcaaataataagatttttcgatcaatgttttctttaaggt gaactctattgcttgatactttcctccaaaattctctaGCGATTTTATGT CTACAAGTtgagtctgaaattgtgtgtgcttataaagaacttttcatttt ctggcttgagaaaataattttaaaaacaaaattgaacggataatGAAATG GAACATAACCTTGTGTCGTGGACGacgttttatttaattttcgtatattg aaaggctagaatcttcaatactgataattaaaatgttcagagcaaacttg agttctactaaaaaaatctcatttcatTGGGCGagcttaaaaatttcttt tgatacattttataaaagtaaTCAAAAGACTTTAGACTTTAAGATAATAA CTGAACCCCCATCTAGGTccgcagtttgaaaaatttcacttgcatcctgg tggatgatatagTCTGCCAACCAACACACGCGGGTGTCTGtgaggaacga agaagtatgattgataaacttggtggagctatcaaaacaaatttgttgtc aaagagatttaacagtaataGTAGTTTTTAGTGTTTTCCAgacagaaaca gctgttttgtccagtttttgcgctttttgaagctcaatatctcgagttag gtactgaaatcacctatacttgcaatatatctctaatcctacttttttga gagctttccaaaaatatacccacaaaaatatacaacaggtctccgttttc tcaagctaaaattttcattaatttttaaccctatgatttttgcctgagat cGCNctatgatttttgcctgagaccgtcgtattttcccgaaaatcacacc aaagtgtccgaaaaaaaattggcacccaagttattttgattcccctaccc cttagctttccaaaaatgtataacaagtgctttggctaaaaaaatcgagc gattttacaaatttccccctactattagtTTGAATAGCAAAATATACAAT TAATAACATAAATATCTAAGGTTTCATTCATACTCACTTTCCAAACCCAC TTATTTAAAATAAACACCCTCCCCCTATTTTACAGCCAGTACTAAGGCAA ACATTTTAAAACTATCCAGGTTAAAGTATCCAAAAGAAGTAAAAAGCACT CAAACTCAGTGCCATAATCGAGAAGGAATCTTTTCTGTTATCCTGTCCAT CTCCATTTattaaaattgtgaaaattttccaaccctttAAATCAAACCTC TAAAAATACCTCTATTGATAGACTTTGATTGTTGTGTTTTCCTTTAGATG TTTTATTCGTTTCCCATCAACCAACATGAAAATTTGGTTCAGTTCATTGG TGGACAAATCCTTTGCCAGGAGAGTACCAAGCCCTCCGCGGACATCAAGA TTGAAACCATTGATACCACTACGAATCTCTATACCTAATGCAGATTCAGT AAATTCTTCGCCAGCCCCGTCTCCCACAGGAACAATTAGGTAAAtttgat tattatttttattattgttattatcacaaaatcttgaaaaattttttttt taactaacTGACGAATGCTTGAAAGAGCAGGAAACTTTAAgtattaaaaa gaaaagtttctcTGTTCATTTCTGAACTTATGTATAAAATtgcaacaaaa attcaaaacttcgtTTTTGtagtactttaagtttcatgcgTACTATCGTC AGCTACATATAAAATGTTCTaacttgttgaaaaaaaatgaaagaaacaaa aatgctATTCTCAAGGGTCCGTTAGTCTTTTGACTTGTACATGAATTTAT TCATGTTATATTGTGAAATTAATGACTCGTGACTAGATACCATGTactct ttttttatcattttgggGGTGTATTGAGTAAGTTTCCCTTGAAACAGATT GGCTGTCAAAAAGGGGGCGGTAAGATTTCATTACAGAAGGGAGGACAATG aaatcagaggaatgtaaagagatggaaaaaacAGTTTCTTTAAAACAATG GAAGAATAAACAGACCATTATATGAAAAGCTAGAGCtcaagaaaattata acttcaccttgattttactcgatttctgacagttttacaagaattaattt aatatcatttgtgttaaaaatttcttatacattggtaaaaaaattgctcc ttatttttaaaaattgaactagtaatcagcaaaaaaggaaaaacaaattt tcatttttattgtcaaatcatgtagaaattggattttcatttaatgacct aatcaacgttttttcaatagaagtgattgttgaactttgagtaatcagaa aagctgttttttgaTCTTAACATTCCTCTGATAAAATAAACCTAAGGGTT CATGCCTCTCTGCAAACTATCTATCAAACTCATCTTTCCATGACCAAGAC TAGAATTGGAGATTTCTGCAGAGTTCCAGATCAAATTTTTGCAGACCCTC ACTTTTCTCCTGAAATCAGCATTAAAGGGCCAAAaaattttggacctacc tcagaggtcctttaaattaaccaaTGTTCGTTTGTttgtctgttacaagc ttttttcgggattggctcattagtttttcagATTTATTTGCAGTGATGCA CAATAGTGATGCTCAAGCAAAAactgacagagcctgattttcacgccaaa aatgccggaaaaccCGTTTCCATTAGTTTTAACTGATTTTTTCCACAAAG GTGCGCATTACTGagatgccggaaatatgctgctggacatttgaggttga ctttgaaatactttgaaaagttttgaaaatgttaaaggAGCCGCCAATgt aacaaaaagttttaaagagcatctgaataagaattcttcaaaatgaaaaa taaaagttaaaatgtatgggaagaaggttgattttaaccgtCTCCCCGAA TTTCCTGTATAGAAAATTGTATCACGGCATCCCAAAATTAGTCTAACGGT Agaaaatctgcttaaggtgtgaaaagatgatggttcaacgccgtgatttt ctaaaactttttgcaaaatgtTGTAAACATACACGAAACGAATTAGTGTA TTAAAGGTTTTCTAcgggaataaaaggagcttattttaggcagtgtcttg atgctgagtcagataaattaaagctacttttttacgcaacgatatcctgc aaacaagtgaaagatcgaaagttgtttcgagatgtgacattttattgctt ttgtaaacaaaataataccaaagttgatttcgagcaaatttacaatcgaa tgttttgattataagatagAAAATGTTCTATTCAAACATTCaaaagagta tcagtaaaagtccctttgttcgaggaatgtttttttattcgtttttctaa tcttgtcacacttgtttttactacatcagcatcatcagacctttcaatca aaacaaaacctttaatatatAGAAGATTCTAAGATTCTATTTCATAAATA ATATTTGCAAGTTATATCTATATTGGACATTTTTTGAGGAttggaatttc aaaaatgtatgaCTATGATATTATCATAACTTCATTTCTCACACAAAACT ATTTAAATGTCACAACCATTTGTTTGATCGAATTACCTTTTCTTCTCAAA ATCTTGTTATTAATCTCTGTATTCAATAAATGTCAAATAGTATAATAATA AAGACAAGTAAAACACACGTTGACACTAAAGGAAGATATCTGTCTGCTGT GTGTGTTTTGAAGTGTGATGTTTGATTTTATTCCTTTGATTATTTGGATA CTTTAGTATTCATAGTTTCTATTTTTGCTAACTTAATGGCTGTGGCTTTT GTGTCGAAAATTGATTTGCTGAATCAATGGCAACACAATtggtttaaaat aaaatttatataatTTCTTCCTTAGAAGTTTTTAAAGAACACTGCCTAAA CGTGATATAGATAGGTACCTTGAAAAAGGTTATGGGAGATTATGGTGTGC TATCACACCCACAAAAAGATTAATAGAGTtgtaccttattacacgaaaat aAACATGTAATTAACATGAATTAAAACCCTTTTAATTAAAACTAGCCGTG ACttccatgaaaaataaaataaattttaaattgattgattctcctgaata ttttcaatgtaaagTTCAAACACANaattcttattttttactcTATTTAT AGCGTACCCAACTCTTGCCCTGTGAGTCCTTCATCTCGAACACCAACTCA TGTTgcttttcaacaaaatttgacGTCTGAGCTTCTTGCTGCTGCGTCAG TTGTAAATGAGGATATTGTCAGTAGTAACGAAATCGAAATCAAAGAAGAG AAACAAGAGGAGAATGGGGAAAATTTAGAAGGGGAAGTTGAGGAAGACAC TGAAGGGATGGAAGAATTCTATGAGAAAAATCAAGAATTAAGCGATGAAG CTACCACACCTACTACTCCACTCAATATGAGTATGACAAAGGGACCAGGG CGTAATCCAGTTGAAAAACCACCATACTCCTATGCGCAACTCATTGTTCA AGCTATCGTATCAGCTGTTGACAAACAGTTAACGTTGAATGGTATCTATC AATTCATCATGAAGAATTATCCCTACTACAGGATAGGAGAAAAAGGATGG CAGGTAAAATGATGTTCGACTTTTATGTGTTATTTCTTCTTCTTGGCAGG ACCTTCTtcataaaaacttcaaaatactTGTAATCGTTTTCACAGTTTTT CCACCAGACAGATTTTAGTGACGTATATAAAGAAGGTTTTTTGCCTTAGA AtttattaaaattcagaaaatattgaaaaatgttCTGTATGGGAAGAAAA ACTGAGGTTATAAGTAACATTTAGATTTTTGagtaaaatgtttattttac tGAGCTTttatgtactcttaggtgccaaataaacgacTCCTCCCCGCTAA ttgattttcaaagaattttttcagctgtcaaagagaaggtttcttatttt gctctaaatagcctgattttggcctatatttaccttatttttggggttta caatttccaacccccttcCCAgcaattagccccccccccNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNccccccccccccccgtttatttcgCACCTAAGAGTACT CAGTGAAGTATTGTATGGTTCTATCCACCTTTTTATTTTAGAATTCCATT CGACACAACTTGTCGCTTAATCGATATTTCCTCAAAGTCCCTCGTTCCCA AGACGAACCAGGGAAAGGATCGTTTTGGAGGATTGATCCTTCTTGTGAAG TAAAACTCATCGAACAAGCTTTCCGAAAACGCAGACAACGTGGAGTACCT TGTTTCAGGCCTCCTTACATTTCCTCAaggtttgttttcatttgaCTCTC CACCTCAAATTCTTCCTACTTTTGTATATATTAGTTAGTTTATTTGCAAA TCTGACTTTCGATTCAagaaagtgctctataccatTGGTAGAGCGGTATA TCAGTCAAGAAtatatacaaatttattttccgataGTTTTGTGCCGTTTC AGcgtttcaggcagtcttcagtcagatttttctgaaaatttggctgaaga ctgcctgaaacggcacgaaactccgagtatcggaaaataaatttATCTCT TTTCTTGACTGATATTAGCTAGTTTATGTATGGTACGGAGGatggtagag tgactgaagcgatttggaataaaccacacttctgacccgcaaaatcgggg aggtaaaagtgctgatttaccgtcgtcctcagctggtcaggatctagtca accTTACCGCCACCGTCACAGAataacacacatacataaacttggTATTA TTTTCTATGACTAATAATAACCAGGTTCTGACTGAGACTGATTTTGATCA CATTGTTATGGTGCGTGCAGAGTTACGAGGTCGGAAAGCTCAAGAGCTAT ACCTATATCTTACCCTCATTTCATGGtggtatttatttttaaagcaAAGT TTTTTAGATTCAATCTGCTGTAAATCTAACAATATGGGGTTGCGTTGTAT TCAAAATTAACCAtcatactttttctttttctgttgtAGATCTGCACCCG CATCGCCCACTCATGGCATTATGATGGAACCATCCTCTGTCAAACAACAA CCACAATCACAATCAAACAGTCGTTCTGAAAGCCTCTCAGAAGAAGAACA AAAACCATTCCAACAGAATGGCAAGAACATTCCCGGTCTAGTTCACAGAG CAAATTCTGACGGTGTTCTATTGGTAACCGACCCAAGCGAAATATCGTCA AAACCAATGCAACAAGTCAATAATTTCGAACATAATGTCATCACAGGAGG TCCTCTGCCTGGTCTACAAACACTAAAAACAACAACTACTACATTTAAAG GGGTTACACCGATTGTTACAGGACCTCCTGGAGCTCAATCCGTTTTCTTC ACTTCTGCAAAACTTGTACCTCAAACTATGGCCGGACAAGTCATCCAGGC AGGCTCCCCCACAACGGCAGGCCAAACTACTTTCATGGTCCCACAAAATA CTTTGAAACCTCTTGATAAGAAAGTAATACATCATAATGGAATTCCAGCT ACTCAACCTACCATTTTGTTTCGTTCCGCAGCTAACCCATCGTTACCACA CCAACAACTAAAACAAATCggacaaaatataaaaacagtTACACCTTTTC TTGCAAATGGACAAGTTCTAAATACGCACGCAAATATAGTTTTTACACAA CAGACCTCTATAAAATCTGAACCTACAAAAACAATAGAACATAATAAACT TCCAACACCACCTGGTGCATTGTTAGCAACCGCAACTTCAGATATACTTG CCACATTAGTACCAACTTCTTTACAAACTGTTAGTGTGATAAAACAACCG ACAACCGATCTCAGTGCCATAAGGGAAGCAAAACCATTCACTTCTATCAC TGATATACTTTCTTCCAGAGATGTAAAGCAGACTCCAACTGACAAAGGTA TGTGTTTTCTCTCATTTCTTTAAAAGAGCAGAAACGTTTTATCATTTTTG TAGAAATCTACGTTAAAATAAGACTCTTCTTTGCACTTTCTTATTCACAA TATCCACTTGTTTAAAATCAATATGAATCTTCATTTGAAAGTTAGCAAGG CTGgactttgaaaatgttgatttgcCAGACCGACTGACTCAACCTAAAAG CTGCAGAACCAAAAAAGacttattgccattttaaagaagaatccATTTCT TCAAATCGACCTCTACTATTGTTTCTGTCTTAAGCTTTTAATCGTGAAAT CTCTTCTACTtgctcttttgttttcattttaaaattactcaattgtaaac aaaactgtcactaattaaaataaaaaattttttcaccctacccacctcca aaatcttaTGTCAGGCAAACAAATATTTCAAAGTCCAGCCATACTTCCTT GTTTACTCATGAGATTGTTTGGtttgtttaaaaacttttttagtaAATAT TCCTTATAATTTCAAACCTTCTTTTTAGCGCAAGTTGCAAACCTTCTGAA GAACCCAGTGGAAGCATTACAAGCAGCAAAGAGAAGCTACCCACAGTTAA ACGAAGCATCACCGCCCAAAAAGTTGAAAACTGAGGGCGACATTCAACCC GTACCAACGTTTAGTGAAAAGAACATTCGGCTCGAAGAGGCTCATACGAA ATTTCAATTGGATGCAGAGGGTTGAGTTGTTTGTTGATAATACCGTTGAT AAAGACAATGGTCAACATCTTTCGGCTGCCGTGTCTTTTGAACAATCctg ttgttgtttgttttttgtttgtttcagtGAAGCTCGCCCACATTTTCAAT GCTCTTTTGATTACGGAAGAATGATCGAACAACAAGCCCTTGAGGATAAG CTCTgtacaattttcattttaactCGCTTGAGGAGTTGTTGTTACCTTTA AAAAACAACTTATTGAAGCCAAGCAGAAGAAATTTGGACAATCTGTTTTA TCTTACCCGTTCAAAATAAACCCAAATGTTTGTTGAAATGGTATTCAATG GATTTAACCCACATTGACttcaaatcaacaaaaatattcaGAACTTGAGT AATGTTTGTGGTGAGATGTTTGGTTCAAACCTCAAAGGTTTTCGAGACAT CAATTTTAACAACCGAGATTAAAAGCACAGtttaaaagcattttaaaaat GACTGAGAAATANATTTTAACGACCGAAATTAAGAGCACAGtttaaaagc atttttaaaaatgactgagaaaataaaaacatcaagcAAAGGACGTTGTT tgcttttgtttgtttttttgttatgCATAAGAAAAGAAGACTTTTTAATG TTCATGTGTGTATATAAAAGTATAGAAAAGGATTTTCGAGATATGTTTTA CTAACGTTGCTTTTTTCCCAATAATATTACACTTATGGCTAGATTCAACC CAATGTGAATACAACTTCCAACACTTCTTGACATTATATATTTGTTGACG CTGCAACGCTTCAGAAacgtaaaaaaaggaaaaaaggttTTGAGTATGAG CTCTTTAGATTTCCTTCAACCAATGGATGTCATTTGCTAACTCGATGAGG GTGTAAAGTTAAGATGTAAAAGAAATGTCAAGAATGACATTTGATCCCAA TTAGCTTTATTTTTCACTAAATTGGACCGTTTTTGAGCGAGAGTAACTTT ATTTTGACTCTTTACTCCTTTTTAGATGATTTATTCCAtttcccgcaaaa atttatttagttTCAGTAATATATTGTAccatttttgcattttcctaAAA GTATAGATTTCTTTCAAAGTACCTAAAATTTTTCAGAGatacatttttca acttttcaactttttatttttagagatACTTGTTCCATAGTCTTTTTTAC TCTAGATAGCttccaaaaatgaaattcagACCCATTTATCTTTTGCATGG TTCAGTGAAAACATGCAAGTTAATAATTTTGCAAAATCTTTTTACTTACC TCTGTAAAAAAAGATTCTGcatgaattttttaaaagtgttaGCCAAAGCA TCAGCCCCCTACTAGTTGCACCCTCTAAAGAAAGACAATCACTGAGTAGT CACTAACCTACTGAAATACCCCCAAACTAAACCAACGCCCCTAAATTTTA AGTAATTTACAAATTCAGATATATATTCAACATATTATATTTATGATAAG AtactttttaatttattttatagacaaaatctttcttttttgatgtAACG TTATTAAAATATACTTCGTTCTTCCTCTTGAGTGCTCCTAAACAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00045643TCONS_00045643Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00045643-proteinTCONS_00045643-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_100supercontigscaffold_100:115817..127611 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.5 14.63 3.4 2.57 92.49 67.26 41.64 44.85 19.04 26.12 22.59 19.26 23.93 25.92 20.32 24.72 25.36 26.29 16.1 13.59 25.92 26.42 27.17 28.93 44.09 44.24 24.01 19.99 38.92 35.49