XLOC_029139 (gene) - C. hemisphaerica

Overview
NameXLOC_029139
Unique NameXLOC_029139
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_1:129476..135551-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029139 ID=XLOC_029139|Name=XLOC_029139|organism=Clytia hemisphaerica|type=gene|length=6076bp|location=Sequence derived from alignment at scaffold_1:129476..135551- (Clytia hemisphaerica)
TAAGTCAGAAAAGATTATGATACAAATATCCAAACAAAAGTAATGACCCA ATGAAGAAATTATCATCAAACTGGCGCTTTATCAATTCAATACTATGCAT AGTGGTAATTATTTTATTGCTTTTTGGCGCACCATTGTTTGGACATCCCC ATCATGAGCACTTCCAGAGCTATTTGGATCATCGTGATTTCTACATGAAT CATTTCAACGAGATGTTGAACAGGAAGGGAGGCATGTATGATTCAAAACA TGGTGTAAGTTGTCTTAACTCGAAGCTTGGCGACCACATTTCGTCTTACC TATTTTTAAGTCATGGACAGAAAAGTCTTTTGCTTTAAAGATCAATTCGA AACTAGATTATAAGAACATTTAGGCTGAAATTTGAGTCTGCTAAATCACG CGCCTAGCGCGTCCTATATTTTGAACGCGTCCACGCGCCCTAGTGCCCAA GCGCCTCACCCGCCTCACGCGGCAAATTTTTTCACGCGCAAATATTCTTC ACACACCTTAGAATTTTCACGCGCCTTTTAATTTTTTACGCACCGCCCTA AGATGCCCTTGCATTTTTCATGTTCTTATTTTATCTTAATCTTACCCCCA GAAATTGTTTCCAGTTTCTGTTTGCGTGAGTCACGCGAGACGCGTGGGCG CGTTCCAAATATAGGGCGCGCTAGGCACGTGAGGCGCGTGATTTAGCAGA CTCAAATTTCAGCCTAAATGTTCTTATAATCTAGGTTCGAAATAGTTCGA CTCCTGAAATTCGGGAGTGAAATAAGATTGCCGTAAGAACATGACTAGCC TGAGAATTAATAGATTTTAAGAACGCTAATGAAAACATTTTTAACGCTCA AAATTTGGGTCTTTTGAATGAGCATGGTTCAGCCAAAATTAAGACGTTGT TATAAAAAAATCGTATTCTGGACAACTTTGGTCAAACAAAAAACGAAGAG AATAAAGGTAGCAAATAAGTCGTCTGAAGAGGAACTTTGACGAGAAAAAA CTCTTAAGGGTCATAGTGAAAAATCAATTTCAGAATTTGAAGATAAAACC TCATGTTTTCGCTTCTTTGACATGTTTAAGAACAAACTGCTTTTGAAAAA ATGAATTTAAGAGTAATTAAGGAATAAGTGTGGCATGGACCTTAATAAAA CGTCAAAACGACGCTATTCATATATTTTTCACAAAAAAAGCCTAATCTCC TTGGGGAAATCATTTTATTGTTTCAAACTTTTTTTTAAGTTAATGACAAA TAATTTCTTTGTTTAGATTTTTTCGGAAAAATTTTCTATTCGGCTACATC CCAAGTTATACAGCTGTTTTTGTATGGAAATTTAGTGGAGAAAATTGTTT TTTGGAGATTCTAAAGGAAAGATACTTCCACAAAAATTTTCCGAAATTTT ATTTTTAGATACTAAATAGATACATCACCTGAACCAAAAAAAATTCCAAA ATGTTTGATTTTTACCGAGATTAGGGCTTTGAATTTGAAAGGTGAAATAC TCTTCTTCGAAAAACTCTTCGTTTTCTTCTTCATTTAGTTTTTTCATCTC AATTTTTCGATTTTTAAATTCTAAAAAGGTAGGTTTAACAAGACATATAA AAAAAGTTATACATTAATCTTTTTAAAATGCAGAAATTGCCATTTAAATT GGTGTAAAATCGATGTCCAGAGCTCTTAAATCAAGGGTTTTGGAAAATGA CAGGAGTCGCATTGTAATTTTCTGCAAAAGCCCTTCAAGTTACAAAACTT AACTAGTGCTATAATGATATGAACATTGAAAAGGAAAAAGACTTACTTGT CATCGAGAGTGTGGTTAATAGTCATGCGCAAGTTATCCTGTATATTGTTT TAACCAATGATTGACTAGCTTTACATTACCTTTATGATCCATGATTATTA TCATTATAGAATGTTTTATTTTGTTAACCTGAAGAAAGAGGTAAAATAAT TTCTTTATTTTGAGAACAGAACCTTATCCAAGAAGGTGATCGAAAACACA GGGAAAAATACTTCAAGATATAGGTTGTAAACTTTTAACCCGGGGAAAGA GAAGGTTTCAGTTAAAAGTCATTTACGATTATCCAAATGAAAATCAAGGG ACTATAAAGTGAGCTACGTCGATTTCTCAGGCCTGGAGGAACAGTGGGGA GGCTGAAGGCTCAAATTAAAATAAAATTCGCTAGAAATTTGAGAAAAATC TCATTTGCTCAAAAGTAGGGAGGCTGATGTCTCCCCAGTCTCCCCGCTCC CTGTACTGTTTCTTACAGCCTATGAGCATGTTCATAATAAAGAAGTATTT TAGGAATGAAAGCTGATCTACAGTTCATATTAGATAAAGCAAAAGAGTCC TTGCTTCTGAGACATAGTTTTTGTTCCGGAATACACTCTTCTCGAGATGC ATAAATTTATTGTTATCCTCGTTTTCAAACAGATTTCATTGCTATAAAAT TACATATTCACAATAATAATTGTATTGTTTACACCTCATGAGACATTTTG AATTTCAAGTACTTTTGTTTTAGAGTTAATGTTTGCCTTTTGGGAATTTA AATTAGTTTAAATGTATAATTTTATAGCAATGGAATCTGTTTGAAAACGA GGACAATTTATGCATCTCGAGAAGAGTGTATTTGCAAAGAAAGAAAAAAT AAATCTTATTGGCTTCTCTATTATTCTCAAGGAATATTCGGATCGCGTGG ACACATACGATCACATCAATCACGAAGATGGACGATTTCACGACGAACGT GATGACGAACAACATGAAGGAGATCACGAACACGGTGAAATACAACATGA AGACAGTCACGCTGAATTTCATGCAAGAAAACGATCCTTCAATCGGATGA AAGCAGGTAATGATTCATACATGTTTAGTATTCTATTGTTCTTAAAACAA TATTCCATCAGATATACTCCAAAAAGTTTATCACTGATTGAGTTTGAAAA CATAATTAAAAAACAACGAAAAAGAGCCCTTTTCAAGTCAACCAGATTTT TAAGTTGTATTATTTGACAGAATAAATACTTTTTGAACTTTTTTGTATTT ATGAAGTATTAAGATCGAAGAAGTTCTGATATAAAAAAGAAGTTGATTTT CTTCTTCTTCTCCTTCATTTTTCATTTTCCTTTTTTCTATTTCTGGAATT GTTTCTTCTTTATCGTAATATTCCACTCTAGACCAGCGGCCGAGGCAGTG GATTGTGTCACTTCGTAGGGCACCCCTTAGATAAGGGCAAATTTTTGATA TCATTCTCCTAATAGGGTGTAGAATTGACAAAAAAAATTTGCCCTTCGAA TCTCCTGCAGTTTTTGAGTGAATCGATTTTTAGTTAATCGATAGAACTTA TCAAGGGTCCCCCCTTTAGTAACGGTTTTTTCGAAGTCTGAAAATCAAAT ATCTGCGACCACCAACGGATTCAGCGTGAAAGGTAGATAAAGAAAATGGG GTTATTTGTTAAGTTTCGACCACCTGGTGCCGAGAAATGGCATTTTTGAG GCGAAAAATCGACGTTTTTGGCGTTTTCCGATGACGTCAGCATTTTCCTA GTAGCATTTTCAGAAAAAATCATTTGCACAACTGGATAGCCCTGAATTAG TAGTATCCAAAAATGGTATGGTTTGTTAACTTTCGATGTCTAGATAATCT CGAGATATTTTGGTTTAAATATTGAAAATTATCGATATTTTTTGCTGAGT CAGCAGTTTTTCAGCATATTTATCCACCTTAAAAATGAATTATCTCGANN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNCAGGAAAATGCTGACGTCATCGGAAAACGCCAAAAACGTC GATTTTTCGCCTTAAAAATGCCATTTCTCGGCACCAGGTGGTCGAAACTT AACAATTAACCCCATTTTTTTTATCTTCTTTTCACGCTGAATCCGTTTGT AGTCTCAGTCATTTGATTTTCAGACTTGGAAAAAACCGTAAGTAAAGGGG GGATAAGTTCTTGATAAGTTCTATCGATTAACTACAAATCGATTCACTCG AAAACTGCAGGAGATTCGAAGAGCAAATTTTTTTTGTCAATTCTACACCC TATTAGGAGCATAATATCAAATATTTGCCCTGATCTAAGGGGTGCCCTAC GAAAACCATTTTTAAGGCCTTTTTTGAATCTCGGACGCTGGTTTACTCCT GTTTATCTTTTCAACAAGCACAAAACCGCTATATAATTAGAATTCTATCA AAAGTTACAGCCTTTTGTCTCCACTGCAGATTATATTCCATGCATTGAGA CAGACTTTAGTTCACTTATGATTCTGATAGCGCTCACATCAATGAGTAAA ATAAAGAATTGGTGCAAGTAGCTCTGGGTGCGAGATTGGAATTAGAGCCT TTTTTGACCTAATACTATGTAGCCATTATGAATTTGGCTTAATATTGATA TGCTTCAATTTACTAAAAAGAGATTATCCGATTATTAAAAGTATACGCCA AGATAAATAAGAAATATTTACAATATCTATCATACAAAAAATCCTATTTA AAATAATATTAATATGAGTAGGTTACAAAAATATAATATCTAAAACTGCA TTAAATAAAGAGATGTTTTTATAACAAAACTATTTACTATAGAGCGCTGA AACTCAAAGAACAGCCATGAAATCATCCAGTTTCTTTGATATGATTAAAT TCTGAGGAATAAATTTCAGAGATTTGGTGATAAAAAGTACAGCGAATATT ACTTTAAATTTCGCTGATGATTCCGCTTAAATCTCACCAAACTTAATCTC ACTAAGGAAATGGATTAATTGATAAGATTGTTGTATATTCATTGGTCGAT GCAAGTCGATAGCATATTATCTCTAGCTGAGTATTAGCAGCTTCTTGAAC AAAGTCTTTACTCTGTTTCGTTTCAGACATGAAGAATATTATACAAAAGG AGAAGACAGCTAAACAATTTCTACGCCTGTTACCAGCTAAAAGAAAACTC AAAAGGATTAAATCAGCATTTGGATGAAGGCGAACCTTATCATGTATCAA AGCCTTACTGATAAAATTGTCAAAATATTCAAAACAAGGACATTAACGCA TTTTGTATCTCCCAGGTGAAGAAAATATTCAGCACGAAGAACGATCAACG ATATTTCCTGTATTCGAATCGTCAAAATATTGTTATACGTCAGTCAAGCA GCCGGTCATGTATTATTAATCATGCGTGAACCACGATCATGAATTTGGAC AATCGCCTGACAGTTTATGGTTAATACGTACTCGCTCTAAAGGGGAAATG CGTTTCCTGGGACATGAAAATACACCAACATTGATAGTGAACATATACAC AGCTTACTCTTCTTCTCTTCGGTTTCTTTGTTGTCGGTATCACCAAAACC TGCGTCAAGCGAAATTCCCAATGAATACATTTCAAGTTCTGCAACGTTCC ACTTGTTGATTGAAATCGAAAGAGATACATCGTCATGTTTGAACCAGCCA GTATATCACCGAAAATCCAAACTTTCGATTGCGCAGACGCTCTGGTACAG GCTAATGAAGAAGTCCAAAGCTAATACGGATTCTTCTTCTCTCTAACATT TTCTCGGTGTAATATCCATGTAACACGCATATCATGTATGTAATATATAA CTTTATAATATCAAGTATAGTGATAACAGGTAGAGTCCAAATGTTTTTGA TAGGGAATCTCTTTCGGTGAATTATTTTTCAAACTGTTGGTGAACAAACG TAAAGAAAACGTTATGAAGATACACAATGTGGCCACCAGTAAACAATAAT ACGAAGTAGCCGGATTCCAAGGCTCCTTCAGAAATGTCACAGCATAGACA CCAGATACCGTCATACTTAGAAGAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00045575TCONS_00045575Clytia hemisphaericatranscript
TCONS_00045574TCONS_00045574Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00045574-proteinTCONS_00045574-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:129476..135551 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12 0.23 0.03 0 15.54 10.59 22.88 22.23 18.39 14.23 11.5 12.14 10.22 6.27 2.62 5.93 12.74 15.98 5.76 8.16 26.58 25.55 3.85 8.36 5.37 6.19 3.41 1.77 0.26 0.14