XLOC_028358 (gene) - C. hemisphaerica

Overview
NameXLOC_028358
Unique NameXLOC_028358
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0006130:24..2498-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_028358 ID=XLOC_028358|Name=XLOC_028358|organism=Clytia hemisphaerica|type=gene|length=2475bp|location=Sequence derived from alignment at sc0006130:24..2498- (Clytia hemisphaerica)
TTTCCATGACCACCATTGATTCTGGCAACAATCTGAGTGACATTGCTACC GACAGCAGCATTCTCAGGAAGATTAAACATGGAGGATGCTGGTGAAACAA CTGTAGGCTCTGGTCGACCATTAATGGTGATATAAGCGGTAGCATTTTGC TTGGCGTAGAATGGAGGTGACCCACTATCTCTGACTCGGATTTTTAAATC AATCTGCTCGATATCATGGAGTGCTGAAATATTGTCGACAGTGACCAAAC CGGTACTGTCGATAGTGAAACCTGGTATTGGAGGATTGATTTCGAAGACC AATTGACCATTAGCTCCATTGTCAGGATCTGAAGCTAAGATTTTGACGAC AAAGTTGGAGCTCATTGGTAACTGAACTGTATAAGTGGTCTGGTTGAAGG AGGGTGGGTTATCATTTTGATCCAAGGTGATAATTTCGATTCTGATTGTG GATGAAGTGCCAGCACTGTCAGTTGCTTTGATGAATAGATGGAAACTCTT TTCGTATGGTTTCTCGTAATCGATGGGTTTGATGTTTGTGATAACACCAG TTGTTGAATTAATGTTGAAGTATGGAGAATCACCAATAATTGAGAATGTG ATTTGATCATTAAGATCATCATCAGATGCGGTGACTTTGAAGACAAACTG ATTGATTTCTTTTGTCTCAGTGAAAGTGATTTTTTCTCCTGACGATCCAA AATCTGGGGCGTTATCATTTTGATCAATGATTTGGACTGTGATGTTAACT GCTTCAGAAGTATGAGAAGTCCCTTCATCTTTGGCAATCACTTGGAGAAT GTATTCGTTATCATGTGTTTCAAAATCTATTGGTTGGATTAAACTGAGAT CACCAGTTTGATGGTTGATTCTGAATTTATCTGAGTCTTTTGTCAGATAG TATTCAATGTTTCCCTCAGAAACAGAATCTGAATCTGATGCTGAAACTGT CAAAAGTGTTAGGTTGACTGGTGTTGTTTCTAAGATCTTGATGCTATAGG TTTGAGCATCAAAACTTGGAGTATTGTCATTCATGTCTTGGAGATGGATC AAAAGTATCGTGTGATTGGATCTCAAACCTGAATCTGTAGCGAAAATAGT GATGGTGTACTGGGGAACTTCCTCATAATTCAGTCCTCTGATGTTTCGCA GGACACCAGTCTTTTGGTTAATTTCGAAAGTATATTGTGAAGTCTCATCA ATTGAATAAGTAATAACTTCATCACGATCCTCATCCGTAGCTTTGAAAGT TTCTGCAATATCCAGATTTTCATTGATATTTATTTCCCGCAAATTATCGG GGAATTCTGGTGAGAATTCGTTGACGTTGAGAACCTTGATGTTGACATTG ATGGTATTGTTTGATCGTTTGGCTGGAGTTCCACTATCAATAGCTTGGAC ACTAATGGAATGAGCTGTTGAAGTCTCGTAGTCCAGAGTCTTGTTTAAGA TTAAATTCGTTTCATTCTCAATGATGAAGAATTCATCCTTGTTCAAGATG CGGAAAGATATTCCTTGGTTACTGGCGTCACCATCTGTGGCGTAACCTTC AAAGTTGAACAAAACTGTGCCTGAAATTGCATTTTCTGGAATCTCAATTT CCACAGATTCATCACGAATCTCTGGAGCAAATTCATTTTTATCTTCAATG TTAACGATCAGCGAAGCTTGGCCTTTGACATCTGGCGTTTTCTGGTCAGC AACGTAAATCGTGGCAAAGATTATCTTAACTTTTTCATAATCCAGTGTAA CAAAGTTGGTCACTGTGCCGTTATCTTTGTTGATTTGTAGATATCTTTGT CCATCTGTTGGTTCCTCAGTTAAGGAGTATTCAACTTTTTGAATACTTTT TGGGTTTAGAATAAACACATCTGAGAAGAATCTGAAATCCTCGTTTTCAA CAGCCGTATCATTATAGATAGATTTTTGGAAATAAGGAACAATAATCTCG TCGAGGAAGACTTGGATATTGATGGTTGCTAGATTATCTGAGGACAGTGC TGGTTGGCCTTGGTCAGAGACCCTAGCTTGAAGAACAAACGAACTATTTC TGTAATGATCAAGTTCCTTGGCAAGCTTCAAGTTACCAGTGTTAGTTTCC AGTTCAAAGGTGCCTTCAGAGTTATCAGAAATGAGTTGATAAGTCAATCG AGAATTACTGGTGGAATCTGGATCTGAAGCTTGAAAATGCACCAGGAAGG TTCCAACAGATGTGGCATTACTGAGTGAGATTTCATATTCTGTTTGTCGG AAGACTGGTTTCTCATTCACATCCTCAACATCAATCACCAGTGTCATTAC ACTTTGCAAATAACCATCCGATGCAATGATGTTGACAGCTATTTGGCTGA TTATCTTATGGTCCAAAGGACGTATGATTCTAACGGTACCATTGTTTCGG TCGATTAGGAAATACCCTAAACCACCACGCAGAGAGTAAGACAAAGGCTC CAAAGAGTCTCCATCTGTTGCCAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00044746TCONS_00044746Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00044746-proteinTCONS_00044746-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0006130supercontigsc0006130:24..2498 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PCDHB2protocadherin beta-2 precursor Homo Sapiens
PCDHB8protocadherin beta-8 precursor Homo Sapiens
PCDHGC3protocadherin gamma-C3 isoform 1 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.71 1.88 1.44 0.59 0.19 0.25 0.25 0.24 0.18 0.44 0.37 0.19 2.71 2.55 0.11 0.31 0.1 0.13 3.63 4.05 0.76 0.26 0.35 0.5 1.98 2.04 0.96 0.69 0.52 0.63