XLOC_028114 (gene) - C. hemisphaerica

Overview
NameXLOC_028114
Unique NameXLOC_028114
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0005647:198..4105+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_028114 ID=XLOC_028114|Name=XLOC_028114|organism=Clytia hemisphaerica|type=gene|length=3908bp|location=Sequence derived from alignment at sc0005647:198..4105+ (Clytia hemisphaerica)
CAAAAACAGATAAGAGAAGCCTGTTTGAGATCTGTCTTTCCTTTACAGAT
TTTTTTGTGTGGTGtagtttgaaagtttttatacGCCGTGTTATAGAAGT
TCTAAAGTGATGGAGAAAACGGTTGAAAATAATCTTTTACAAACTCTTAA
CATCGAAAGATTGGTCGAATTTGACAGTCACATTGGggatgtttttcaaa
atgttttttatacaCTCTCGAATAACACGGCAATGAAGATAGAAAAAATG
GGCATTGTGTCTCATTTCTTAAGGAGTTGGAAAGACACGGTCGGTGCCTC
TAGTATCTCAAAAACATTACCATCTATCATAACAGGTAACAAATCTTAAT
CTAAAACTTGTTCACAATGTCCTGCGGAGGAGGTCCTTGagcgaaaaaag
ttttgaaagactCTCACTATCCCTTAGCACAAGTAAaatagaataatttt
tttcattccattCAACTTTGAAGCCACAGAAAGCATATTTCATCCAATTG
ATTTCATAGATATTCAAACCCCACCCATCTTGATATCGTCACCTACTGGC
CAAAGAGACAGAGTACGTGATGTTAAGTCTAttcgagacaggggtgtaat
ctGAGCTGTTCTGCATCAACTTCCTTCCCTCATGTGCTAGCACGCTAGAG
GACTATACTTAAAACATTATATAATGGTCTTAAGGAAACCCGGAAAGGgt
atacttttttataagagcaaactatataagaatataaggcttcgctggcc
aaaatctaaagaacaagttaagaacacttaAAGGTTTCGTGACCTTTAAA
ACNtttttttgagcattttgatgtaatttcttaagaaattgcatgttttg
aagtttccaaagccttagtatgttcttagaatgttcttaaatttttgggc
tcgaagccttatgttcttatatagtttgttcttataaaaaaaagtgtact
ggCCACAGAGACAGAGTACGTGATGTTAAGTCTAttcgagacaggggtgt
aatctGAGCTGTTCTGCATCAACTTCCTTCCCTCGTGTGCTAGCACGCTA
GAGGACTATACTTAAAACATTATATAATGGTCTTAAGGAAACCCGGAAAG
Ggtatacttttttataagagcaaactatataagaatataaggcttcgctg
gccaaaatctaaagaacaagttaagaacacttaAAGGTTTCGTGACcttt
aaaacatccaatttcttgGGAAATTGCACAAGAATGCTCATTAAATGAAT
Gatgaaattaagaatttttctagacataaaaaattatttgaattttcatg
tataaaaaaatgtgtgagTACAACAGAGTTACAATTTTAATGTCATCCca
taacaattatatacctATAACACCTATATTATTATATGATACGTATTATA
AATGACTTCGTTCTATTTCATCCATATAGGAAGCATCGTTGAAGGAGCTT
GTCTTTCTCGTTTATACCATCCCTCACATGAGCAGTCCCTGGAACTTGAA
GCCGACATTATGTATATTGTAGGGGTCATCGATGAACAAACCGCAAATCA
ATGTTTTCAGGTACATAAGATTAAAATGGGTAATGATCATGACgttttaa
cacccctgtgtcacagacccacgccccactgaaaaattggcgaaaatacc
ctagaattttagccccgttgaaaaattgaatttaatttcatccccattcg
aaattcaatgtttaaaaatcgcacttcaaaaccatccctattggattttt
caaccttggaactgtaaattttctatccccattggaatttcaataggaat
tatccccactgaggaaaaaatttccaccggggctgtggaGATAGGGGTGT
GTTTTAAAATCATTAACTGGTTCTTATAGAAAAGGATTGATTCCAATATT
TTTGAGGAAGTGAATAGTACTGTGACCCAAATacaatttgtttattttcc
CAGGATGAACCCAAAACTGGATTCTTGAAAGTGAAATACTCTCCAAGTAT
TACAATGTTTACATCTGAGaatcaaatgaaaattgaaaatgctgTGGAAA
TTACACCAGATGGTTGTAAATATCTCAACGGGAAAGAGTTAAAAATTATG
CATAAAAATCTACAAGTTAATGAACAGCGGTTACGTATTGATAATGGTTC
GCCGTGCATTATTACAGTCAATCAGAAAATTAGTGGACCTAGTTCAGAAA
TCGTCTTCAAAATTGTCCCAATACACCATCAGCATCAAATTGAAAACATC
GCGTCTTTTCTCAAAGACATAACACAgctttttgaaggaaaatgcgAATC
TTTCTACCAAGAATTTACTCATGCTCAAGAACTTTGTACAATTCTAGAAA
ACGTTTTGAAAGCAGTCAAAGAAATTGAGTCAGATCGTATTTTTGATAAG
GAGCATGATGATAAAAACCTTCCCCTTCTTTCGTGTGAGGCGGAAGACAT
CATATCACAAGTGATAGAAAAGTTTAACAGTCTAGACACGAGTAAATTAG
AAACCGATTTCAAAGAGATGCACTCACTTTTGGAGGGAATAATTTTGTTA
TGTTCTGGTAACGAGGACAGTCATGCGAAAGCAAGACTTGATGTTTTCAA
TATCAAATCTTTGGACCTGACGGCTATGGCCAAAGAAACGCTACAAACTA
ACCCAATGGTTCAAGAAGTCAAAGGTCAAGGCAAAACCCTGAACGAAGCT
GTAAAAGTGTTAGAGATGATTGATATCTCCCTTGTGAAAGCTCATTCGAA
CTTACCAAATATTTTACAAGAATACAGAGAAAACATCGTCAAAGATGTcg
caaatttagtgaaatctATCGAAGACCGATCCAAAGAAGAATGTTATCAC
CAAAACATCGATTCCATATCTTTTGATAACGTATCCTGCTTCTACTGTCC
TTTCTGGCCCAAAATAGCCGAGGAATGGGTCCACAGAAAACGCCAATGGC
CTTCTACGGAACAGATCCAACAAATATCCGATGCTGGAACTTTCATCGTA
GCAAAACAAAGCGAGGAAGGTCAACACCACGGCTTAGAATGGAGATGGTC
TTTCTCAACCGCAGAAATATCACTGGCAAAGCTTCGAACTTCAACTATGA
AGTATTgctatttcattttcaaaacaatgttttataaatattttaaaaat
ttccctgGTGTTGTAAAATCGTTACCGTCATATTTTGCGAAGACCTGCAT
GCTGTACGTTTCTGAGCAGCAAAAAGAATATTGGTGGGATGAAAATGGTG
TTGTAGGCTCATTACTGCAtcttttcaagtttttgaaGAAGAGTCTAGAG
GAAAAGATGCTTCCCCATTACTTCATCCATCACCTTAACCTTCTCCAGGA
TATAGACATATCGTTGATAAATCAAGCTCTAAACATGGTCAACCAGATCC
TACAAGATCCATCTAATTATCTAACACTAGAGGAAAGCCGTATGGAAATT
TTTAACCGAATTGAGAATGAAGTCAACTCACTTCTATCAACTGGAGTGGA
AAGTGAAGAGAGGAAAACNcatggaaatttttaaccgAATTGAGAATGAA
GTCAACTCACTTCTATCAACTGGAGTGGAAAGTGAAGAGAGGAAAACACC
TACAGGATATTACAAGCATTTCACTTCCCTTCGTCAAAAATGTGCTGAAG
TTACGAGTAATCTACATCGGTCAGCCTTTCTCGGAGAATACTACCGTCTT
CGTTTCCAACAAGTTCACTTACAAAAGCTTATTGAAACCCAAGATAAAAT
GTTACAAAAGAACCGCGGGAAGGGGCCTGATTACGACCTTATCGAAGAAT
ATTTCGTTAATAACAAAATGGTATTACAAAAACTGGACCAGGAAATCCCA
ACTATGCGCCGATCCATATCTGAAGCACTGATCGCGATTTGTcatttgtt
ggaaagat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00044484TCONS_00044484Clytia hemisphaericatranscript
TCONS_00044485TCONS_00044485Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00044484-proteinTCONS_00044484-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005647supercontigsc0005647:198..4105 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07	0.09	0.29	0.15	2.44	2.5	3.9	3.51	1.36	2.32	3.53	0.97	7.65	6.34	1.9	3.57	2.15	3.3	10.98	13	11.29	11.18	3.92	6.18	10.56	9.95	13.54	14.46	7.9	5.37