XLOC_027687 (gene) - C. hemisphaerica

Overview
NameXLOC_027687
Unique NameXLOC_027687
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004866:1..3353-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027687 ID=XLOC_027687|Name=XLOC_027687|organism=Clytia hemisphaerica|type=gene|length=3353bp|location=Sequence derived from alignment at sc0004866:1..3353- (Clytia hemisphaerica)
CTATAACTCGATTGTCTCCTAAACTCGAAGAAGTTTTGTGGTCACTTCAG
TTATGCCTCTTAAACCTTACTCCATAACTCGAAATTTCCTTAACTCGAAC
AAGTTTATGTTCCCCGTGCGTGCTCGAATTATGGAGACTGCACTGTATTT
TAACTCTAACCTGACCTGGTTTCTCTCTTCCACAGGGTGAAGATGACGAT
GAAGATGTAAAAGAAACTGAAGAAGATCAGGACGGTTTTTTTGTTCCGCA
TGGTTACCTGTCCGATGACGAGGGTGTTCCAGATGATGAGGAAGATGAAG
AGAATGAAGAAAACGAAAGTGAAAAATTGCCGGTACCGAAAGATATAGCT
GATGCAAAAAGGGTGATTATTTTGTTGTTTCTTTTTTTGAGGATGTGTAC
TCATATTCGAGGTTTTCTTGTTTGGTGTGTTGTTTGTAATATCGCTCAAA
AGACAACTAAAGCCTTTTCAAGAAAATAAATTATTTTCATTAAAGTGTCA
AATTTATAGAGGTATACCTAAATTCTTCCTTCACACTTTATTCTCAACTT
TTCCAATCTTGCCTTTGATGTATAGGAACAAGATAAACTGAAATCAAAAG
TCGATTCATTCGAAGTCGCTTTCAAAAAGAAGTTGAAACCACGAAAACCG
ATATGCATTGGAATCAAATTCACAAACAATATTGAGGATGCTGATCCCTT
ATTGAAAGATTTTTACAAAATTTCCTTATACAAGTCTCACGGTGACTCAG
AGGCTAATGAGAATGAAGACCAAGATGGTACACCAAAGAAAACTGGTATC
GAGGCTAGTGGAGAAGTTAATAATGGATCATCGGTTCCTTTAACTGTCCC
CGAGGAAGGTCAGTAAATTTAGTTAATAATAGTTAACAAAACAAGAAAAA
TGCGGTGTCACAACTTTCAATCTTCATTTTTCTGGGAGAATGACGTTGTG
TAAACAAATAATTTTTATTTTTATTCGAGGGAATTCTATTGTAATACTCC
CGAAACAATCTCACAATGCATCGCTTTTTTAGAAAAATCAAAAACTGCGA
TAAAATATATTCTTTGTTTCTTCACATTATGAAATGAAACGTTTCATCTA
CAGAAAAAAAATCTTCTTGTTACAATACACCTTTCCCGAATTGTTATTTA
GGCTTTTTGACTTTTTTGTTTTAATGTTTGAATGTTTCTATTTAGTTTCA
TAAAATTGTATGTCGCAAAACTAAACAAATAAAAAAAGAATTATGAAAAA
AGCACTTCCGGTTCTTGAGTTATTTTGAATTTGAAATTTCTTTATAAACA
ATAGAATTACATGGAAACGAGGCCGGGCTGTATGTTTTAGTTTTTATAAG
GGATTTCACATTGAACAAAAACAGTCATAAAAATTGATAGAAAAAAGCTT
TTGAGCTCAAATTTTCAGCATGCACTTGTCTTTATAGGAGGAATACAAAT
ATATAGTTTTCAATATNNTTTATTTTTTTTTCAGCCATGCCGTTCCTTCT
GAAATTAGTCCACGGAAATGCAACAAGTATTGGGAAAATGATTCAAGAAT
TCCAAACATATTGGGTCGAATATGTCAAAATAAACGAGCTCGATAACCTA
CGCAAAACTATTTCTAAGAAACAATGCATCAAAAAGATGAAAGAAATTGC
TACGAAAGGTCCCAATGAAAAGTTGGGGAAGATTTGTTATACAGTTAATG
TTGATATTCTTCAGAAATACGGTATAGCAGATTTAGAGCTCGGTTGTGGG
TTGACTTATCCAGTACTCAAAGAAACAATGTTGCTAAGCAACGGAGCGAA
AGAAAATGGCGCGGATACTACGGAAACTGTTGTTAATGGGGATTGTATTA
TGTTAGATACTTTAAAAACTGAAGATGGTAATTTACAGAACCAGAATGTT
GATAAAATACCGAACGATGTGTCGATACCGGCAGAAAACAAAATGGAAGT
GGATTGAGATTTTTTTGGTTTCCTTTCATTGATTGTAATCTACACAAAAG
TTTGTATTTGCATTTCTCGATTGGTCATTTAGCGAAAGTTGTTGTTGGTG
TATGGAGATCTTGATCTTGCAGGAAAGGTGAAATCGTTTTCGAAACAAAG
TTATTTGAAATAGCAACCCTGGTTACAGACAGGAACCTGGTGATACAGGT
TTCGTATTAGATCTGTTTCAGGTCACCTTGTCATCTACTCACTACCGGAA
TATGTGGTTTACTTTTAAACTCTTTTGACCTTTCTAACAAAGATACTCTT
AGAAGGAACAATGGTGTATTGTTCACTCTAGTCGACTGGACATTTGAAAA
GAATTCGTTTTTTGTTAAATAGTGGCTTTGTTTGACTTACTTCGTGATAA
ATTAGTATTTTTCTCTGTTGAATACTGAGAAGTGAACACTATGGACAAAG
GTAATTCTAACTGATATGGATTGAGAATTAGTTTGGAATGTTCACTTACT
CTTGGGTGCCTAATAAACGCCTCCGCCCTACGCCAACCCACCGNGGAATG
TTCACTTACTCTTGGGTGCCTAATAAACGCCTCCGCCCTACGCCAACCCA
CCGATTTTTTTTCCAATCCCCTCCCCTCATTTTTGAAATATTTTCAGCTG
CCAAAAGAAGAGTCCTTTTTTAATTCTCTAGTTTTAGCCTATATTTACCT
TATTCTTCGGCTCTTCAAGGGTATAATTTCCAACCCCTCTGCTGCAATAG
GTCGCCCCCCCTGCCAATTAAAAATTGAAGATTTTTCTACCCCCTGTTTA
TTAGGCACCTGGGATCTTCGGAATAAAAGAAAACATAAATTAGTGAGTGT
CTTCAAGGTATGCACCATTGTAATGTCTTCCACGAACCTAGCAGCTGATT
GGTTGCAAGTGGACGTATTGAATGATTTTACGTCACTTACAACCAATCAG
CGATTGGTTCCGTGATGTGATGTCGAAGACATTGCAATGGTGCATATCAT
GAATGCTTTCTTACAAACATAAAAGAGAGATATTTCGTTTTCTTTCTCGA
TTAGGATCCCACCGTTTCATTTTAGAAATATTTAGAAGTTATCACATTTG
AAAGGCCCTCTTTTTTGCCCTAATTACTCTAATGTAATTTCAATTTTTTT
TATTTACTTTAATGGGGTAAACTTTCGCGGGGATTAAATTTCGCGGTTGA
GCCTAACCACGAAATTCAAAAATTTCGCGGGGACTTAATTTGGCGTTTGG
CACTATTGGGTGGCAATATTTTCGCAATATTTTTGATTTCCACTGTCAAA
TCATGCATGTTGGTTGTTGAAATACACATTATTTGCGCTTCTTTGATGCA
ATTAACCATTCAAAAAGTATTTATTATACATATTTTGAGTATTGTTTAGA
AAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00044031TCONS_00044031Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00044031-proteinTCONS_00044031-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004866supercontigsc0004866:1..3353 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
44.57	40.96	38.55	38.87	21.32	17.31	16.52	17.65	12.31	14.38	11.1	7.8	7.86	7.59	8.75	9.15	12.93	11.94	2.73	3.38	10.38	12.2	25.33	22.54	18.89	20.25	4.16	3.65	15.07	17.22