XLOC_027129 (gene) - C. hemisphaerica

Overview
NameXLOC_027129
Unique NameXLOC_027129
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004217:1261..5409+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027129 ID=XLOC_027129|Name=XLOC_027129|organism=Clytia hemisphaerica|type=gene|length=4149bp|location=Sequence derived from alignment at sc0004217:1261..5409+ (Clytia hemisphaerica)
AATTCacttttatgattttcaaatttccaacgtTACCCCCGTCTCGAgaa tcactttcgattttgcacGGGCTTTTTGATCCTGCAGACGACCGACCAAG CAGCCAGCAGAGAGCAGAGCAGACACAGAACACATCAACATCAAAATTAT TGACAATCCtgttaaaattctttaaaaagaccATAGAATTGTAAAAGGTG AGTTTGttaaatgattttctttccATCATAaagcttttataagaaatgaA AGTGTTACAGAGTCATTTTCTGCAACTTACCAGCCCTAAGAAAAGCTTCC CTTTTTATGCTTTTTATCAGGCCTTGAAGTGATGCTGAAACTTTACACTC CCCACTCTGTgacgctgtggtatagtggtcattgaccttggttgctacgC AGGAGACTGAGGTtcaattcccactcgcagcggttcacttggcaagtgaa tgaacctttgcCCGGGTCAACCAATGCCATGTGAGGtgaggggggcgtac gggtttgacggtgtgacggtattaacccttttttctgtcggtgtttcagt gtttgaggaaaaaagtgacagtatttcggtgtcaaacatgccatgcggtg acaaaacaaggatttttataattttttgctatcggtgttgacggtaatcc aagaaatatgcgtcggtatctcggtgtctgcgacccccgtacgcccccct ctGTGAGGGGGAATTGGGtactgtgagatcgggtaacttgcatcagtgga ggcaaacatgcatagccctcaaatgaatgacctgctgtctggtcattaaa atacaaagttaaatcaaaactaaaatgatagagtagagctgcgtagttaa tttgttttgaaattttgctgctttgattggtcagtcatttgatggctatg caagtttccctcaaCTGATgcatgcaagttacccgacttcacggtagtca gttcaaggtgctgttcaaggtgctgacagggcgctaattgaaagcgtcta tagttgcgaaaatgggcctTAAAAGCCTCATGCGACTCAACCAAATACCG TGataggtcctaaagccgacagccatgcctaaagccgatggggtctttca aagatacaaactaaaataaaaacaaacctttcgctgtgacgcaacgaaga taccaaagtgtcaactaaactgagaNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Ntgcttcttataacaaaacatatttttttattgcaatatgcacaacgtca taaatgacaacagtagtaacagcatcataaaaagtaacgagatgttttga ttttcaaaagtacacgaaaatataaaagaggtctgtgtatgagcgtgctc attttgaaacgttacgtaatcaagcctggtttctattactttacactggc acttggcttgattgcgggcctaggactttgtgtaaggatacatatagacg gcgtatattacattatattatatattacatgataagaatacaaatagaca acgtatattacaattattatgtattgcatgacaccttgctcctattctag taaagataatatatgtcgtcaaagagtacacttaaatgaagagctgtccg attgcgggccttccgtaaataaacatccggacttataggtggtaaaaagg gcgttgatagttgccgcctcattgattcgatatttcagttagggaaacca tccagaatcctgccattctataagccagcaaaaactaaatgacacttgta aacttaagtttcttaccattttccatcgaaaacaatcaANNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNAACattactacttcccaaagccggagacc agaGCAAATGATCTTCCTTGAtgagggcgcccttttggatctattgttaa ctcatttaaaatggtggacagaaTTGCGGAATGATAAAGACGCCcgctgc ttcgagggtggtaacgccaaaacgcccaatatgatcagccaacagaaggc gagtttgttaccgcgcgagttacgtcatgcactccaccgtagcGAAAGCG CGAACgacatttcacaattataagaatatcttatgtgcttaattctattt gactttgagagctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAaaatgcgctggtta attttgtttaaataggtgtgttctatcattgttgaaagtttgagaaattt ctaccgacgcaaagattttttacagccaattaaaggcaaagtctgcttat acttactgTGTTTGCTATATCGTCTAGGCAAACAATggtaaaaaaagaca caaacgTAATTTGTTTATGAGTGCAGTTATGATTtatttgattgcggccg cgtacaggaactcgccaaatgttcctaactgtatttgttattcaaattag tgctaccacatccgcccttttttcaacttcgcgccatttttacaatttag tctttgtttcttgatggaaaccagtccaagttgtttcgtatttttcctgc acaagtcacttttattacaaaactgttatcgttttaaacatgagcaactg atccagaataaaaggtaattatttttacaaatcacactttttaattacat taattgacatcttgacattacagctatcttgttagatgttttgtttcgag agttctagcaatagtttatcgttcaacttggagaNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNg gagagggaatgtttgtaaacatagaattttttttcataacagttatttgg ggggtcggaattaggctgggctgtcggctttaggacctctcacggtagaT GGATAGAGATAGACTCCCTTGGCCTTTGGTTATTTGCTGCATCAATCCTT CACTTTAGTCACTCCAATCTAGATCTTTTCAATAATGCCTCAACCATCTT AAACTAAGCAAATTGTTGGCGGTCTCACTCTACAACCGATACTTTTGGCT GGCTAAAGTTGCAATCAATATTGGAATGAATAAACTATAACTATGATAAT GCTGGGATATCTTGAATCATGGGCAAAATAGCAACAACTGCTAACCAGCT GCTAACAGCCAATGAGAGATAAGCAAGTTGTTTTGGATAGACTTAGGTAT AAAATGCTAGGAATAGTTGCTATCTTGCCCATCATTAAANgcaaaaaaaa tttccataattatatttgactatcaaaagttacaggcattcttgtttcca ctgccaattatatctggacagactttaataccAACAATCACGAAATATTT GAACGTGCATGTAGTTTTCACCTCCCTGTCCAAAATACCTAGTGAAAACG CTTTAAGTAAGGTTAATctaatctattttgaagaccgttccgaaaaaagt ttgtttacattcactCAACTTTAGTATAGTAAAGTTTTTACATGCACATT CAACGTTTTCTTGAATTGCCAGTTTACATTACGTTAGTATTATTTAAGTA GTATTGATAGTGAGGGTATCAGAGTGGGATTGCCTGGAAGACTTTTGCTT GTGGATACACAGCTAGCACTGGTGACATAATCTAACAAAACTTCAGCACT GTAGTGCTGTGCGCTTTAAAATCTGTGACAGAGTGAAAATCAAATaccat agtttttgaaattttctttcttttctttttatacctATTCAGGATTCCCA ATTCAAGATGTTGACGTGTATGTGTACCTGTATGAGAACATTTTGAGCAA GAACAATAACTTCGAAATTTTAGAGAATTGTATGGCTTGATTATGGATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043431TCONS_00043431Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004217supercontigsc0004217:1261..5409 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.43 0 0.65 0.41 25 23.33 20.79 28.36 7.02 8.66 12.02 13.79 10.13 15.57 7.69 8.81 6.15 4.34 13.58 7 9.56 8.93 8.49 6.48 15.43 18.81 3.31 9.8 2.8 5.98