XLOC_026883 (gene) - C. hemisphaerica

Overview
NameXLOC_026883
Unique NameXLOC_026883
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003968:13424..17276+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026883 ID=XLOC_026883|Name=XLOC_026883|organism=Clytia hemisphaerica|type=gene|length=3853bp|location=Sequence derived from alignment at sc0003968:13424..17276+ (Clytia hemisphaerica)
CGATTGTGTATATGCTTTATTTGGTTTGTTCTATAACTTGAGCTACTTta
tcttaaattttttatttttttttattattgctGCTTTAGACTTTTCATTT
GTGCGTGTAAACGTTATTCTGCCCCTGAGGCAGTCATTCCTTTAGTTTAT
tattattacgaaaacgttccgtaatattttaaaagtttcctgtaatattt
ttaaaggattttatacTGATGAGTGGCGTAGAAAGCTCCCAtttatgagc
tcttttcacTCTCAGGTTTTTATTCACTGTAAATAGTACTACAAAAAGCG
AAAGAGAACTTAANNCCTGTAAtatttttaaaggattttatacTGATGAG
TGGCGTAGAAAGCTCCCAtttatgagctcttttcacTCTCAGGTTTTTAT
TCACTGTAAATAGTACTACAAAAAGCGAAAGAGAACTTAAACTTaaaact
taaacttaaacttaaacttaaacttaaaaATTCCCGCCCATTATCCGCCA
CTTGCAAACATTGTAAAACCGAAGTCAAAACACGAGGGAAAAGATTCAGT
CGCCATCTTGGAAGGAAGCCATGATAAATAATCTTGACAAGCAACAACTT
TAAAAGGCAAGTATATGTaatggttttttttcttttgcttttattgttct
aaggtaGGATTTTTGCTTTGAGATGCTTTCAGTCATGAAGAGTTTTTCAC
AGATNttttttttttcttttgcttttattgttctaaggtaGGTTTTTTGC
TTTGAGATGCTTTCAGTCATGAAGAGTTTTTCACAGATTtgtctgtttgt
ttttgttttaaaagctATGTCAAATGTAGCTAAGAAAAGCCCCAAAAAAA
TCAGTCTCTGTTCTAATGAGGTGCACAGGCCAGCTCTGGTCTTTATTTGT
ATTTGGGGGAagggaaatgaaatttttcattttttccacttcttaaattt
ggaaaatatccTTTCTTGCAAACAATACTGACCGTGTTTTATGGGAAGTA
TTTGCTTATCTCTGACCGTGGTTATGGTAAGAGATGAAAGGTTCAACATG
ATTCTCTTTTATCAgaagttaaagaaaaattatgaacttttaCTCAAAAT
GTTTAAATATATTTAGTTAAAAGGAAagtcaaattaatttttatcattgt
tgATCTTTCATGCATATAATACTGACCGTGTTTTATGGGAAGTACTTGCT
TATCTCTGACCGTGGTTATGGTAAGAGATGAAAGGTTCAACATGATTCTC
TTTTATCAGAAGTTTAAAGAcaaatgatgaacttttagtcaaaatattta
aatatatttaGTTGAGAGGAAAGTCAAATTaatttctatcattgttgatC
TTTCATGCATATAATACTGACCGTGTTTTATGGGAAGTACTTGCTTATCT
CTGACCGTGGTTATGGTAAGAGATGAAAGGTTCAACATGATTCTCTTTTA
TCAGAAGTTTAAAGAcaaatgatgaacttttagtcaaaatatttaaatat
attaTAGTTAAGAGGAAAGTCAAATTGatttctatcattgttgatCTCTC
ATGCATATAATACTGACCGTGTTTTATGGGAAGTACTTGCTTATCTCTGA
CCGTGGTTATGGTAAGAGATGAAAGGTTCAACATGATTCTCTTTTATTAG
AAGTTAAAGAcaaatgatgaacttttagtcaaaatatttaaatatattta
GTTAAGAGGAAAGTCAAATTaatttctatcattgttgatCTCTCATGCAT
ATAATACTGACCGTGTTTTATGGGAAGTACTTGCTTATCTCTGACCGTGG
TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCTTTCATG
CATATAATACTGACCGTGTTTTATGGGAAGTACTTGCTTATCTCTGACCG
TGGTTATGGTAAGAGATGAAAGACTCAACATGGTTCTCCTATGCCATTAA
ATTTAATgacttttataaatctatttatTATCTATTTATTATCTATTTAT
TATCTATTTCTGTTTGTTTTAAAGTGTGTACTAACCACTTGGGAAATTGT
TTCTTTGCattaaaaagaaagcaaaaggaCAGTATAGATCATGAAAATGA
CATGTGCAtgaattttcactcaaaatttcaaaaatctgaaaacaagtttt
catttcatttcttcaGGTTGGGATGCTCAAGAGAAAACTCACTATAATGG
ATTCTACTTTCAGGCAGAAAGAACTAATGGTAAGCAAAAGAAACACTTTT
CCTATTTTGTATCTTGGATCTGGGCTGCCAAATTTTATGTCCCATCTGTA
CAGTACACTACAATCAttgacaaaaggttgtagacaaatgaaatttcact
gaaaaatgatgagaaatagagcaaaatgacacttcaatgtgtctgaaagg
ggagggAATTAAGACAAatacttttgaagtcgttgcattgcttttgaatt
gcttttgagggaaccacaagcaaaaaatcagcgttgtgatactggtgtaa
gccagttagtcaagcccttgtggttagcccttgtggttagactgcagtgg
gtgactttgagagactttcaaCAGCTTTGGATGGGTTAGGAAAGgaccca
gaacctcttgggaacttgtttttgatcgacattgaagtattttgcaaaat
tgcagaagtctacaaaccatGACTGTACAAGACATTTTAAACCTAACTTC
GCCAATCATATAAATTAGCCAATCATTAGGCTGTTAGTAAAATGTTTCAA
TTATAATAAATGTTTTACTTccattttcaggaaaaattATATGGTTGACC
CTTTCCTCAAGACACCTTATACTATGAAATGACGCATGATTATCCTtatc
gagcctctcctggattTCTAAGTCACAGTTTTGTTCTCAAGAGATACTGG
ACACAAtcatgaaaatgaaacaaacaCCCTTTGGAAATCAATAAACTATG
AGATTAACTCAAAACAGTACACTAAATATCACGAGCAATGATGACAATCA
CTACATCGAATTTAATTGATAATCATCTGGGTTTAATAATGTGTAATTTG
AGACACAATTTGATAGTCGTTTTGGTCAATATGTAGTGAATAGTTCTTGT
TTTTATCAATAATGTAATGATTTGTCTACATAAGAGCCAGTCTTTTAGAT
TAGACTAGTAAAGCCTATGAGATCGAaagatttttggtattttttaggGT
TTTACTGTAAGGATTTTTTTGGGATAAGTTaggtttttggtatttttttg
gGATTACTGGAAACTTCTGAGGtttaagattttgtttttttagatttttt
gggGTTATTTTGGAAAAGTGAGCAagattttttcgagttatttaccCCTT
GATGTAAATTCATTAAGTTGTCTGTGTTAGATTATGACATGGTGTCCTAT
GAGTCATTTGGTTGCTCAAGTTTAACCACCCCCCATCAGAGTTAGGAAAC
CTTTTTTATTGCCCCCATaccttttcaaaaacattaccGAAATCTaagtt
gattttcaaaaaggtttttctcCCTTTTGGCACTAAATGGACTTTAATAC
TCATTATTTCGATACTTTGTAATCCGTTTATGATTTACATAGTatactaa
aaagaaaatttcaagcaattgTAATTTactttttccgatttttttaatGG
CAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043161TCONS_00043161Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003968supercontigsc0003968:13424..17276 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.37	15.61	5.49	4.77	28.31	20.89	27.32	33.24	14.87	11.71	11.07	16.54	15.01	18.69	12.9	12.93	7.82	11.35	3.73	4.46	18.71	20.66	26.58	23.81	7.78	15.56	6.96	7.75	9.74	14.68