XLOC_026832 (gene) - C. hemisphaerica

Overview
NameXLOC_026832
Unique NameXLOC_026832
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003916:3603..9894+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026832 ID=XLOC_026832|Name=XLOC_026832|organism=Clytia hemisphaerica|type=gene|length=6292bp|location=Sequence derived from alignment at sc0003916:3603..9894+ (Clytia hemisphaerica)
CTCcgataaaactaaaaaaatacacaacaagcaaatttcaaaattaattt
ttttaataaaaatttgtttcattttgttaCTGATGATATGATGAAATGGT
AAAAATTCGTTATCATTATATCAGAAAGCTTTACAAGAAACAATTGAATA
AATATCTACTAAGAACTATAATAATCTTActtatgaaataaaaaagtttt
aattttgaaaaaaaatgtcacGGTATTATCATCATAAGAACAAAAATGAT
ACAGCATATCAAAacatagtctacacaatagacagatccaggcttttagg
ccttactcttctacgaagagtaggagttttacgctcgaaacgaaggaaga
tatgacgtagcctaatcAAAACACCGATCACCAACGTCAGTTATGAATAT
TTCCTCATGAATTAGACTTCGGAGGCTTCCACactgaagccacttatttc
ccatccagaacgcgcctaaaacgcaccgcaatcatgacgacggattgtat
ctagcggttcctttgtttttgaggactgcgttttttgaaaactagcgatg
gattttactttcaatccggcgtttgtgatAAAACCATGGACAGGCGTTCT
GGATGAGTAATAAGTggctttatttcccatccaggagtctcgagtttagc
ccttcgggcttggaagtcaatggcaTTATGTGCTCGGAAAAGTGATTGCG
AAGTTTCCAGCGAttgaaaaaagctggaaaagcagaTTCTCGTGCATTTT
CGCACGCTAATTACTTTTGCATGCGTTTCATTACGTCATAATGAGAAGCA
TGCGCTGTGAAAACGTTTTAAATAGGGCGTTTGAATTACAAACATCCTCG
CTGCATTCACTCATCAAACTAAGCGTACTTGTGTATGTGTgtgtaagaaa
aaaaaattctttttaaaaaatgtctaaaaaatcAAGTGAGAAATCAAAAT
CTACTGACGGTGGAACTACTGCTGGAAATGAAACACTAGCTGTTACTTAC
GAGCAGTTGAAAACTCTAGTTAATGATGTTGTTGAAAAAGACTTTGGCCC
ACAAATCATGAAAAGCACCAAGGACACAGTGAAAGCTGCTTCTGTACAAT
CTGCTGAGAATCAGTTGACCAATCTGGCCAAGCTCAAAAAGAAACTCGAA
AAGAAGAGAGCCAACGACAACATTGTACTCAAGAAAACTGGCCATCAAGA
TCAATTTGCTCATAACACAGCAGTCTTGGAAACGATTGAGGATACCCTCG
AATTCATGGAAGAGACGGATGTTGATGGGATGAAAGAAGCTTTGAATAAA
GGTAAGAGATTACTAGAGACTCGTATTCAACATATTAGAATCGCCGACAC
ATATGGGTGGCTTACTGTCAACGAATTTAAGGCAAGCGATCTTACATCCG
GAGACGTGGAGGAAAAGAGGCTTAAGAGGGCTATTAAAAATGCAGAGCAA
GTTAAAGAACGTATATATAAAAAGCCAAGAATAGAGGAACCTGATGGAGA
ATACTCCAAGGCAATCAAATCTAGAACTGAACAAAGGAGCCGTATGGATG
AGGTGGTCTGTTATTCATGCAAAAGAGTAGGGCACTACGTCAGCCACTGT
CCTTTTTTTGAATCTTCGTCACCTTTGGCCCACTCGATAAAGTTAATGTC
CTCACCAACAGCAACAAAAAGTTCGTCGTCCAATTCAAATTCTAAATCGT
CAAGGGATGGAAAATAACTTTAAcaaaaaatagaagattttcaGATATTC
AGAACNCCACTCGACAAAGTTAATGTCCTCACCAACAGCAACAAAAAGTT
CGTCGTCCAATTCAAATTCTAAATCGTCAAGGGATGGAAAATAACTTTAA
caaaaaatagaagattttcaGATATTCAGaacaattttttcaacttttga
aatacagtagCTAATTTACGTTGCgttagttttaaaaattgattaCAATT
TTGCCTTGTTGTAATTAGATTAGTATTAATGAGAGCTAATGATATAAACG
TACCTGATCTTCTATTCTATTTCAACTGTGCCATTTTACCTTCTTTAATA
ATAAATGTCAAAAATGGATGATGCAACAAATTATCAAAACTTCTCTCCTT
CGTTTTGCTAATTTACCTCACTGGGATAAAAGACGATTAATAAATTTTGA
CGTTATTCAAGAACTTCAATTTTGGCAACCCAATTTATAAAACGTAAAAG
CTTTTAGAATTAAAACTAAACCAAGAATTACGAAGGTCATCTTTTCGGAC
ACAAGTGGTACAGGCTATGGAGGTTACGCGGTAGAAAAGTTAGGAAACAC
CATAGCAAAAGGAAATTTTGGTAGACATGAAATACAACTAGCTCAACTTG
TCGTGAACTTCTCGCAGTTAAATATTTTTGACGTCCTTTCCAAACTTCTC
GAAAACGAAATAATTGAGTGGTTCACGGACAACGATGTTTGTAAAATAAT
CAGCCGCGGTAGCACAAAACAACACCTACAAAATcttgcaatagaaattt
ttcaacatcTGCTTATCTCATAACGTCGGAATTTACCCTACTTGGATACC
AAGGGACATGAATAAAACAGCAGATTTAATTTCCAAATCTACCGACACAG
ATAATTGGTCTATCGATAATGAGATTTTTAATTATATAATCAAGCTATGG
ACAAATTACTATCGATCGAATTTCCAATAACCAAAACGCTAAAGCAACTG
TTCTCGTGAGTATTACCCAGGAACATCTGCCGTCAACGCTGTTTCCTATT
CAACACAAAATGTATAACTGACGGATTTGCAGGCTTCTATTCTGTAACat
catttttctttccttttatgTTGACAAACTTGGTGACTACATTCGCAAGA
TTTATTACATCACGATCAACGTTACACGTGGTGTGTTTTATGTGTCAATG
CCTCTGTGCAAACACGTCTTTTGCGTCAATGTCTCTGTACAAACGCATTT
GAGGGGTTCGTTCTCCATCTTGAAGCCCATCGTCTTACAGATGGCAAAGT
GCAAAGGTACGAAATTTActatttttcttatttcaattttcgacAGATCA
TGACCcccaaaatttgaaagaaaaactcgCAACAATATTAAAGATAAAAC
TGAAATccgattcaaaatttttcaatcattgggaatttaactttaaattt
attttttttgctacTATATTATGTACAACTCAtaacttctttctttttta
tctctCGTGTTATTGCAGACAAATACCAAACAAAGTAGCTATTATTGTGA
TTTATTGTTTGTTCATTCGGGGAAGGAGAAATAGCCGAGAAGCGAAGTTT
CCAGCGAttgaaaaaagctggaaaagcagaTTCTCGTGCATTTTCGCACG
CTAATTACTTTTGCATGCGTATCATTACGTCATAATGAGAAGCATGCGCT
GTGAAAACGTTTTAAATAGGGCGTTTGAATTACAAACATCCTCGCTGCAT
TCACTCATCAAACTAAGCGTACTTAAACAAAATGCTGTCCAATTTACTAG
GTTTTGCAGGATTTTTTAGAATTAGCGAAATCCTTCAAATTCAGATAAAG
GAAATCACTTTTGACAACTTCGGTGCAACAGTTTTACTACCAAAGTCAAA
AACCGACCAAGTTCGTGAAGGTAATATCGTTTTCATTAGCAAGACAGGAA
CAAAATGCTGTCCAATTTACTGGCTTCGCAAATATTTGTCACTATCCAAA
TTAAATTACAAACCCGAGGCTTACCTATTTTGTCATCGTTACAAATCAAA
GCAGGTTCTCAACAATTTCGCACGGAAAATTAATTATGCATGCGCATCAT
TAAGTGATAATTATGATTCGTATGTCTttaaatacaattcaaaattcTAA
ACCATCCTCGCTATTGCATTCactcaaaatcattttcacatACTTTAGCA
AACTTTTCcgaaatttccagattttctcGTACTATATTTAATCATAAGCC
CCTGTATACTCCGGTCAacctttctttatttttatgacATTGGAACAATC
GGACAAGAGCTTCTTCCTGGACTTCAAACAGATGATCAATCAATGGCTCA
GACGATCAACCACCAAGGAATACAATAGAATATACTAAGACTATCGATTA
CCAAAACAAACGCCGGTCATTAGAGATTAACGATCTTATCAACATTCACC
ACCGACAACTTATCAAACATGGAATCGTGGATGTGTTTTATCAAGTTGAT
GAATTTGGTATTTCTTAAACGAAAATTACTAAtagattgataacattttg
aAGCTATGAAGCTCATACCTCGTAAAAATCCATTACAATAATTATAATTC
AAATTTATGATCTCTTACATTTGAGGGTCAAACACTTGCAGATGAAATAA
TTTCGTTAGTAAAAAATTTGTACATAAAGGGGGAAGACCTTTAACCTCCG
AAGGTCGGGGTGACGGACGCCATTGGTTCGGAGATAATGTTTCCTCCAGA
ATAAACAGCCACTGGGGGTTTTACGCTACACGCTTCGTCACAAAAATTCA
GGTGTATTTTATTTGAGTTTATCCAACTTGtaattttacNCTCATACCTC
GTAAAAATCCattattataataattataatttaaatttatgaTCTCTTAC
ATTTGACGGTCAAACACTTGCAGATGGAATATTTTCGTTAGTAAAAAATT
TGTACATAAAGGGAGGCAGACCTTTAACCTCCGAAGGTCGAGGTGACGGA
TGCCATTGGTTAGGAGATAATGTTTCCTCCAGAATAAACAGCCACTGGGG
GTTTTACGCTACACGCTTCGTCACAAAAATTCAGTTGTATTTTATTTGAG
TTTATCCAACTTGTNNNNNNNNNNNNTTTCCTCCAGAATAAACAGCCACT
GGGGGTTTTACGCTACACGCTTCGTCACAAAAATTCAGTTGTATTTTATT
TGAGTTTATCCAACTTGTAATTTTACTACCGattttgttaaacatttttt
ttaccGCGAGTGTTAATGCAAGCAAATACCAAACAAAAAGTAGAAACAac
tatctttttttattgtttgtttcattTCGAAAAGGAGAAATAGTGGAGaa
cgtggaagacattgcaaggGTGGATATCATGAATAGCCGAATAATTTTTG
ACCAGCGATTAATTTTTGCTGATGAATATATTATCAAATGACTTTTGGTT
ACTTTGAACATTTTATTTGCTTAAAACTGAATACTTTACCGCTAAGTTTT
GGGTTTTTGTACTTCTCAAGGCAAAGGATTGCCACAAAGCTAAAGGAAAt
gcctcgttgaatattacatcacctcgggttaataaatctcaatgaccaac
ttttacctattgaatatctgcttatgaCCACTAAATTGAGATTTTCCGAT
CGTACTGCAAAATATATTATATCTAGGAGTGGAAATATAAGGCCACTAAA
CGTGTATTAGGCGGTATAATTATGCGTGAGAATGGCTTTGATTAATATCT
TTAAGTTGATANAGACGATCAACCACCAAGGAATACAATAGAATATACTA
AAAGACGATCGATTACCAAAATAAACGCCGGTCATTGGAGATTGACGCTT
ATCAACATTCAACACCGACAAATTATCAAACATGGAATCGTGGATGTGTT
TTATCAAAGTGATGAATTTGGTATTCCTTAAACGAAAATTACAAAtagat
tgataacattttgaAGCTATGAAACTCATACCTCGTAAAAATCCATTATT
ATAATAATTGTAATTTAAATTTATGATCTCTTACATTTGACGGTCAAACA
CTTGCAGATGGAATAATTTCGTTagtaaaaaaattgtacataaaGGGAGG
AAGACCTTTAACCTCCGAAGGTCNataataattataatttaaatttatga
TCTCTTACATTTGACGGTCAAACACTTGCAGATGGAATAATTTCGTTAGT
AAAAAATTTGTACATAAAGGGAGGAAGACCTTTAACCTCCGAAGGTCGGG
GTGACGGATGCCATTGATTCGGAGATAATGTTTCCTCCAGAATAAACAGC
CACTGGGGGTTTTACGCTACACGCTTCGTCACAAAAATTCAGTTGTATTT
TATTTGAGTTTATCCAACTTATAATAATTTTACTACCGattttgttaaac
attttttttaccGCGAGTGTTAATGCAAGCAAATACCAAACAATAAGTAg
aaacaactttcgttttttattgtttgtttcattTCGAAAAGGAGAAATAG
TGGAGaaccatctttttctaaatactttcgcaatattatcgaaatccaga
taatccgtttttattaaatcggaatagataatcggattagat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043095TCONS_00043095Clytia hemisphaericatranscript
TCONS_00043096TCONS_00043096Clytia hemisphaericatranscript
TCONS_00043097TCONS_00043097Clytia hemisphaericatranscript
TCONS_00043098TCONS_00043098Clytia hemisphaericatranscript
TCONS_00043099TCONS_00043099Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00043098-proteinTCONS_00043098-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003916supercontigsc0003916:3603..9894 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
37.57	37.06	17.66	9.95	1.76	1.52	1.81	1.87	2	3.13	2.81	2.69	15.82	15.71	12.05	8.61	4.61	5.14	1.98	1.96	2.84	2.94	31.65	28.36	5.61	6.19	53.76	48.3	21.66	17.53