XLOC_026658 (gene) - C. hemisphaerica

Overview
NameXLOC_026658
Unique NameXLOC_026658
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003754:6200..9813-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026658 ID=XLOC_026658|Name=XLOC_026658|organism=Clytia hemisphaerica|type=gene|length=3614bp|location=Sequence derived from alignment at sc0003754:6200..9813- (Clytia hemisphaerica)
GCTAAGTTTCATAATTTGTGGAAGATGATCAGATATGTTGCAAATAAGGT
TAGAGGATGATATTTCTTTGTTTATAAAATAAAATTTGTTTATAAAAATG
TTGTCAATAAGGGTTTTAGAAGTTGGAGTGATTCTTGTAGGCCTGGTGAT
TGTTGGTAACATGCAATGAGAAAGGTTACAGCTGAGAAAATTGTCAACCT
CTGTGTTTGATTCAACAGTTAATAGGTCCAGGTTGAAATCACCAAAGATG
ATAGCTTTTTTATTTTCAGCGAGAATTTTGTCAAGTTAGTCTGAGTAAAG
GCTGAGGAAATTTTCTGAGTCAGCCAGAGGGTGCTTGTAGATGCATACTA
TTATGAAATTTTTGTCGTATACAACTTCTCTTACAACAGACTCAATTTGG
TTAGTTTTANATTTTCTGAGTCAGCCAGAGGGTGCTTGTAGATGCATACT
ATTATGAAATTTTTGTCGTATACAACTTCTCTTACAACAGACTCAATTTG
GTTAGTTTTATAAATGCAGAGGTCTGGTCTTGGTAGCGTATCATAGCTAT
CCGAGATATAGATTCTAGCTCCTCCCCTAGATGATTTGGTACAACAGTCA
AAGTGTGTGTAATTGAGAATTTTTGCAGCACTTTGAGCTAATTTTTTGTC
CTTGAAACCAGTTTCAGTTATACCTATGAAATCAAATGGTAGTTCACAGT
TGTTGAGAGTAGAAACTAGTTCAGCATGGTGAAGATTGAGAGAGGCAATT
TTAAGATGTAGAGTGGAAATTGAGTTATTGTTCTTATGTTTTTCATTGAG
TTCACTGAGTGATAGATAAGGACATTGAAAATTAAAAGTATTATTGTCTT
CATCATCTTGAGTGAGAGCAGAATCTATATCCCTGTAAAATTGGAGGTTA
ATGTCATTAAATGGATCTAAGAAAGGATCAAAATTCTTACCTTGTAAAGT
GAGTTTGAGACTCTCGTGGGGGATTTGTCAAAAAGGTACCGCTGAATTGA
AGCATTTTTGGCAGAACCAGCTGTCAGGATGTTGTTGTAGACGTTGGTAC
TCCGTCTCCGATGTATTATTACAGCTGATGTGGATCCAAAAATCACAGGT
GTCACAGCAGACTGCTTTGTGATTAGAAGCTACAGGATTAGAACATATTC
CACAAGGGTTTTTGATATTACGTTTTGACTTGGGGGCTTTCTTAGACTTT
CTAGGCATAGATGAGAAGATGTGAGTGGAGAGAAAAGAGATAAATAACAG
ATATAGAAAGGTGAAGGTGAGAGGCCTGAACCTGAGCGTATTTAAAATAA
ATAGTTATGAATGTAAGGCACTGGCTGGTGATGAAAGTCAAGCAAGAGCT
AGTACTAAGATCACATTAAATCAAGAGGCAGTGAGCGAGCCAGGCAGAAA
AAGGCTGGACATTAGTGCAGAGCCAAGGAATGTAAGCTTTAAAGCCCAGA
ACCAATATAAACAATATATAATATTAATATAGTCAAGAATGAAGAAACCT
GATGAACATGATTTTAGTAACTCAAATGTCAAAAAGCTTTATAGAATGCG
AATTTCGTGCTGTTTTCTTCCTTAACCATAAGTTTTGCTGGGAAGGTAAG
GTAGGCTTGTATGATAGTGTTCTGAGGGTCTTCGATAAGTTCTTTTCTGG
CCATCAAAGCCTTATTTCGTCGTTCCATAATAGAGTTTGAAAACATTTGA
TCAATCTTGAATTTGATTTCTCTGTCTTTGGATTTGAGTTTGTTTATTGT
ATTAAGTACAAACTGAGCATCGTTCCAAGAATAGAATCTGATGTAGATAG
GTCTAGTTCTGTTTTCTTTCTTGTGTGAGCTTCGGTGGCAACGTTCAACC
ATATTGGCAATTTGTTGTGTTTCCATATTCAGGTAGTAACCAAGGAGTTC
ACATAATATTTTCTTGGTTTGGNAATTACCATAATTTTTAGATCGCATTA
GTCGACAGAAAATGACCAAACAAATGACTGAACGTGAAGGGTACTATGAT
GTAGTTTCTAACCTGATGTGTACTCAAGGGGATTAACGCGGGGTCAAAAT
GCTTGCAACGTTACAAATCATTTTCAGAAGCTCATTTTAGGCTCAAACAA
AGCGTATGACTAAGTAGAATAGGATTCAGTCTAGGCAGATATTTTTTCAT
TTTGAAATTTTGCGTAATTCGCAAAAATCCTCAATTTTGCGCTATTTTGA
TGACGTCATAAAAATTGAAATCCTTATAACTTTTGATACAATTATCAAAA
TAATTTCAAATTTTGACCAAAGATGCATATCATTAATTTTTTCAAAATTA
AATAAAACAATTTATGAAATTTGATGACGTCATCACTTTTAAGGCAAAAA
ACTAAAATCCTCAAAAAATAATGACGTCATCAAGATTTTGAAAATTTTTG
AATTTTTTTTGAAAATTTGCATTGAAATGCATCTTTANTGAAATGCATCT
TTGGTGAAAGTTTGAAATTATTTTGATGATTCTATTAAAAGTTATTTGAA
TTTCAATTTTTATGACGTCATCAAAATAGCGCAAAATTGAGGATTTTTGC
GAATTACGCAAAATTTCAAAATGATAAAACATCTGCCTAGACTGAATCTT
ATTTTAATTAGTTATAGGCTTCGTTTGAGCCCAAAAGGAGCTTCTGAAAA
TGATTTGTAACGTTGCAAGAATTTTGACCTCCACGAACCCGCCTTATTCC
CGTGGAGTAACCTAATTGTTTTTTCGCTGATTTTCGCGAAAAACCGCAAA
AACTGATTATTACGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNATAGTACCCTTCACGTTCAGTCATTTGT
TTGGTCATTTTCTGTCGACTAATGCGATCTAAAAATTATGGTAATTTTAA
GACATGCCATAACTTACCCGAGAAACTGAGCATCGTTCCAAGAATAGAAT
CTGATATAGATAGGTCTAGTTCTGTTTTCTTTCTTGTGTGAGCTTCGGTG
GCAACGTTCAACCATTTGGCAATTTGTTGTGTTTCCATATTCAGGTTGTA
GCCAAGGAGTTCGCATAATATTTTCTTGGTTTGGTCCCAAGATTTCTCGG
TTGTTTCCTCGGGAAGGTTCCTCAAAATTAAAGTACTTCTCAGTGAACGG
TTCGTTTGGTTCTCTATCTGCTTTGTCTGGTTGACAATGATCTTATTTTG
TTCTTCAAGGGTAAGCTCCATAGTCGCCATTCTTCTGGAGAGTTCAGTCA
TGTTGTTTGTATTAGTCGCAATGTTTTTATCAGACTCCATAACTTTGTCT
TCTAAGTTCTTTATTTTTTCGTTCAGGTCGGACTTTATTTCCGAGATTAT
AGCATCCTTCTGTTTTTCCAGTGTTATATTGTTCTTGGGAGGCATGATTT
CAAAGATAAAGGTGGATTGAGAAGGCTGAAAACTGTGAAAATTGATGTAA
ATTTAAGCCTTTTTCTGTTAGCTGAAGCTCAAGCCGCCATCTTGAAAATC
GTCCGCCGGCGAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042876TCONS_00042876Clytia hemisphaericatranscript
TCONS_00042875TCONS_00042875Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003754supercontigsc0003754:6200..9813 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.54	0.76	0.81	1.16	0.7	0.78	0.72	0.93	0.43	0.7	0.77	0.38	0.95	0.7	0.64	0.48	0.7	0.47	0.26	0.24	0.54	0.26	0.24	0.41	1.02	1.97	0.45	0.73	0.2	0.58