XLOC_026590 (gene) - C. hemisphaerica

Overview
NameXLOC_026590
Unique NameXLOC_026590
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003679:96..5268+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026590 ID=XLOC_026590|Name=XLOC_026590|organism=Clytia hemisphaerica|type=gene|length=5173bp|location=Sequence derived from alignment at sc0003679:96..5268+ (Clytia hemisphaerica)
ttttggcCCAGCGCGGTTAGCGtaagggcctttcatttgcactGTGCCCG CTGTAAGTAACTCGCATGGTAGACGGAGCTCGTTTCATTATTTGAGGAAA ACAATGATTACAGGCTAATCATCAATTCTTTGCCGCGGAAAGTCATGTGA TatacttttcaaccaatcactatggtttaactcactaaaagaatTTGTTT ACCGATAAGACAATgttaatctttagtaagtgtgATCTAATTCTGCTCAA ACCTTATGGAGCTCATGGATTCTGTCTTGTTTTTATCTTTGACGTTTGAC TGCTTCAGACACACGTTTTTTTACCAGTTGTAACTATGCTGTTAAAAATT GAGACCCTGTTGATCCTGTCCAGCTGCTGTATTTATTACAAATAGTGCAA ATACAAACATCCATCCATATCATTATTGATGCTGAAAGTAGTTTTTCCAG CTGATCCTGTGGGTATTTATTACAAATAGTGCAAATACAAACATTCATAT CATTTGATGCTGACTGAAGTTTCTTGCTCAATCGCGAATCTGCTCCCTGC TATCATCATATACATTTCTTTCAAAAGGTAATTAATTAAATCATTgagat atttttttaatataggCGACTATAAAAAATATGTTCTGTTTGTGTCAGCC GACCGACAAAGAAGTTGGCAGACAAAGATTCCAAGTCTGACAAGTCGGAA AATTGTtgcaatttttcattgaaagagCGAATGAATACTAAAAACTATAC TTTGAAATCACCTAATTTACTACCGTCATCCTCTACATCATTTACAGTCC AGTTACAACAATCACACCACCATCTTCAAGACTTGGCTGGTCGCGCAAAA TGAATAATAAAGAAATGGCGGCctcaaattgaaattgaaaccgTGCACAC CAAATTGCCAGATAAACTGGAATACAAATACCGTTTTAGTTAcaagaaaa atttgtaaaagCGTGCTTGGCCATTGTCGAACAGTTATTAGCCTGCAATC GCGACACGAAAATGTAATTCGGGTCTAaggggagccgtccatattcattt gacaaacAAAACGTCACattgacgttatgagggggtggggggttttcaaa agttaggtttgacgttataagaaatcaaaggtatacctttttgtgaaaat cgcggATATTTGTAACCACCAACCACACTATACTTTATAAGCTTTCAAAA ACATATTCGTGTATGAagtacatgaaaatttgctgctcgcataatcccat tggtttgggctatgatatcattacatcatattttcattgtttgcgcgatc gagcgaaccacatcgcacaagtgggcaaagaaggtggtacgCCTAAAGCA CGGCACCGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNttttaatttctttttaaataaaggtcattagtt aaaagaacacatacacacacgggtacaaccaagtacggactttgcgacgg aacgggaaaactttgatgaaaaaaggctacaacttttggtatacatcagt acatcgcttgacgttatctgtgggggtggggggttcagaggattagtcaa tttgacgtttcgagttgtcaaatgaatatggacgggtccCCTAATGAACA TGGACGGTTTCCACATCCATACAAATCTTTCGCCCGCGGGCACTGCTTGG Tgcgccatccatatagtacgtacgcagtgaagggggagagggggtttagc aaaagcgtacatctattgtttaaatgacattatttctattgttttctgcg tacaaggggggagggggtatcaaatttttggaaaatctttgcgtacgtac tatatggacggccccctTACTATTTAAGCAAGTTTGAGAGCTTACAGAAA CCAGTCCTTCGTTTCACTCTGTATGTAATCATGaaataaaacaataacaa aatgacACTCTTGTGCGCTCGTAAAAAAAGTAATGGCTGTGGTTttgacg cgaacggaacatattttcgaTTGCCGTCATACACCAAAACAATATATTTG GAATGGCTAGCAAATAGTGTCTATTAAATAGACTGTGCAGCTTCCTTTTA ATGTTGTTGCTTGGAGAACGTAGCAATAATGTCGGTCGGACCCCTccaca cctttcccgtaattctggttttctggattttttttctgcaGTCTTTGCAC TCCATCGCTTTTTAAAAgagaggtaaacaaacccaatTTTGCTTGCTTTT CCTTAGGGAAGAGTGGTTTTTGGCCTTTTTCTTAACTTCTATTGCatgga atttttgaaaacttcagTATGCTTTTACTACCAGTCAGCAATGCTCAAAG ATAAAGATAACAATTTTTACGTTTGCTCTGAAAATAGTTTGTCTTACTTT AGTGTGTGATCAAAATGACACAGTCTGAGACTAGATGGCATAATGTTTAA TCTATTTCTGGTTTAAAACAATGGATGTAGTAATATGtattaaaaaattc cagaatgacCCTATTAAGCGCTCCCTAAGCGCTGCAcctatagatttttt tttcaaaataagtgCTACACCTAGAATCCAATGCAAAGCGGCGCTtatta gaaaatcaagaaaaataaagcCGCGCTTATTAGaacataaagaaaaatga aaaacaaatgttttttacTCATATTCTACTGTCATCAATTCGTTTAACAA AACGCATTAAATTTTTCTACTGAAACataatcttttaaaatatattcCAT TTTTTCTAGTGCTCACTCGAATAATTAATGACAAGAAAGAAATCCTATCT TTATTCCAATCCTTTACAGGTGAGTTAACTATGTTTTATTAACCGCAAGT TGTATTTAATTGAAGGGGAAGTCGAGTACATTTTaaatggaagaaatttt tgtggcATTCAATTTCGTGGTTGACACCCAAAaccacaaaaatttcttcc ctctgatcaaaaacaaaaaatggacgGGGTCTTTCTTTCTATTTACTGTA Atacttaaaacttaaaattgcattttagggctgcttaaaataatttgaaa tttttgttttctctttcgaATTTTGATTAAATGTGGATGGGGGAGGCTCC ATTATAAAATAAACTTTGTGATGAAAAAATTTACACCCCTCCtatctctc tctctttctctctaaAATTAGGCACAAAAGACAAGGACATGAATAGAAAA ATAGACTCATTAGCAGTATTCAGAAGTCCCTGAAAAATTATTCGCCTGCC TTTTTAGGGGCTTATAATCTTATCGAGTTATAAAATATCGAGCTGGTCTT CGAATTATGAAGCATGACGTCATGCTTCGAGTTATGACTATTTCCTAACT CAATGAATCTGTTTATGAAATAAGGTATCGAGTTATTTAACTCGATGGAT TAGGTTTTACATTACTAATGAAATAAAGTCACCgagttactttaatggga taaactttcgcggggattaaatttcgcggatttcgcggatttgggtgtca tccgcgaaaatccgcgaaattaagtccctatggaaatttggaagggcctc ttccgcaaaatatttctaaacaaaactcaaaatatgtcagataaatacta tttgaatggttacttgcatcaaagaagcgctaataatgtgtatttcaaca accaacatgcatggatttggcagtaaaagccacaaaatcgtgaaaatatt gccacctgCAAAATTGAGTCCcagtgaaatttttgaaattcgcGGATAGT cccaaccgcaaaatttaatccccgcgaaagtttatcccattaaagaaCAT AACTCGATAAGTTAGTGTTTAAAATAAGTCATCGAGTTACACAACTCGAA AATATGTAACTCGATTTTCTTAACTCGAAGATAATAACTCCCCCTTTTTA GGAGAGAATAGCAATTCAATAAGAAATTGAcgtttcatattttctttttc gttttaggAATCAACGCCGAAACCACCGATCTGTCGGTGGAGTGTATACC ATACTACACAGCCAAACAGCCAATCAGCCAAACAGCCAAATCTTATTAAA CTTACTCAGCTTACTAAACTGACTAAACTCAATCAGCTTACTCGGTTAAC AATACCGTTTTAAAATATACATTGAAGTTTCCTGGGAGTTTCCTGTGTCA TTTTTTTGTTCTTCCCTTCGCAAAGTAATCTTTAGGCGAAAAATCATGAT ATCGATCGAAGCTTATCGTAGTTCGATCGGCAACTTTAATGGAACTAGGC AATTTGACCTTTGTTCAATATATCCATATATCGAGGTTTTAAGGTTGGCT CGTCACTTCCCAGTAAAGGGCTTTCTAGACTTCTTAAAACCTTCCCTTTT TTAGTAGAATCTTTctaaagtaaaagaaagtagaTCAGGGTTTTCGAATa gtgtttttcaaaaagtcgaaaTAAACTCTGAAATCTGAAATGAAGGTGCG TTTTAGCTCCGAACCAGGTAGAAGAATGTGCATgctaaaatcatttttat aaaaaggctTTTAAGCGAGAATGTTTTCAGGTAGCAAACTTAACGGAGGA ACAgagcatttaatttttttgtagaacgctattttttttcaaggagATAA AAAAAGCATTACTAATACATACGATGGAATAATTACAAGTAATACTAATA ACTGTAAAATGAAAGATCTATGTTCTACAAAAAATAACTATTTCTTTAAA AGAAACTCCTACAGCTCTATTACAATAAACATTGCCTtacatttcttata aaaaacgtaccTATTGGAAACACCTGAAAACACGGAATTTGACCCATGTG CTGTTATTTCTATTAAAAAACAATATCTGAAATACTACAGATTATTCAGT GCCATCTACAAAACCTCTATAGAAGGGAGGCTGCGTACCAGAAATATACA TTTTAACAATATAAATATGAAAAACTATGTTCGAGAGGCCTTGAAGTGTC ACGGGAATAGACCACTTGATGTCCGATTAATATTGTACATACAATGAAAG ACGTCTTATGCTGGGCCGTAATGCCGCCAGGCTACTtgtgtttttacata agtgtttccgtttcatacgAGACAAATATTTCATATCAGTTATTGTGCTG TATAAGCAAAGACTTTGCAGGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042791TCONS_00042791Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003679supercontigsc0003679:96..5268 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.45 1.3 0.85 1.52 7.07 4.91 5.53 6.76 4.21 4.62 4.55 5.48 4.41 3.34 3.74 3.32 4.62 5.01 6.74 4.89 3.85 4.99 2.78 2.26 1.62 2.77 3.96 3.62 2.07 2.46