XLOC_026546 (gene) - C. hemisphaerica

Overview
NameXLOC_026546
Unique NameXLOC_026546
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003644:4492..7996+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026546 ID=XLOC_026546|Name=XLOC_026546|organism=Clytia hemisphaerica|type=gene|length=3505bp|location=Sequence derived from alignment at sc0003644:4492..7996+ (Clytia hemisphaerica)
AACAACTTTGTTGATATTCTACGTCAATCAATTCAAGGTAACTTTcttat
catttattttttcaaaataatgcaATCTAGGGTCCTTAGATTGAGAATAA
CAAACCAAAATGCTCAACCTAGAATAAAGTATTCTGTTTgcaatttacac
gttttttttttaagaaacatgaggctcagaatgcctaaataCTAAGAAAC
AAGCTAAGAATTagaaagtaacatttttaattcgtttttttttaaagaac
cttcctatcaaaacaaatgtttttttctttgcatgaaaaagaGGCTTatc
atgtcaaaaagtttagaaacatgtaagaaacaatTAAAGCTCAAAAGGca
gatttcttaagaaacattgaaactgtttggtaaaactagtttcttaaaaa
acaaacttagTTGAATTCATATTATCTGATATATACAGCAATGAAGCTTT
AATCTGTTTCTCTGTTAtgataaaatttacaaaactaaattaacaaaatt
tgatttgattatattttGTTCTCAATTTTGATACAACTCACAACAATGAG
ATTAACATCTGTTAATATAGTGGATTCAGTACGAGAAATGTGGCCAGTAA
ATTTTATAAACTCAAACAAACTAAACCtgtatatttcaattttaatcaaa
agagaaagagaaattcTTAGAGGTGTACAAGatcttattatatttttttg
tgattttttattttttatgatttcttttataGAGTTTCCAGGAGTTACCA
CTTGTAATAAAGCATCTTCACAACACTGCAGGCAATTATCAAACAAGTTA
TCAAAAATGACACAATAGTTCTCACGATTTATCTTAATGACAGGTCTCTG
AATGTTTTATCTGACTAAAACAGGTGcatgatttcaatttttaaggtgCT
GATTGTGTTAACTTGAATTAGCTTTTAAAAATGGTGCTGACCTCTCAAAC
TCCTAGGGTAAAAGTTAAGCACATTCATcacattcaaaattgaaattgtg
GACCTGTGTCGGTGTCATTNTATAGCTTTTAAAAATGGTGCTGACCTCTC
AAACTCTTAGGGTAAAAGTTAAGCACATTCATcacattcaaaattgaaat
tgtgGACCTGTGTCGGtgtcatttttgaaaacatgagtGCCAAATGAGTG
CAGTGTTCATGCATCCACTGATCACATTTTTCGCATTGAATCCACTCAGG
CTCATCCTGGCCTCCCTCCCACTGTCTCTTGCACCTCTTACACTCATCTT
GTCCCTCATTCTCACTTCCTGCTTCAATATCACTTCCATCCTCATTATAA
TTTCCTTGGTTGATCATTAGAGCGTAATTGACCTTTTTTCGCTGTCGCTT
TGATCTGTTTGCTGTTGGTTGGTTGGTTGTTGATTGGCTTGTTGTTGGCT
GGTTTTCTTGTTGAATTTTGTTTGTTAATTTTCGTTTTTTCTTTGCCGGT
TTCTTAGATTTGCTTTTCCTTTTTTGTTGTTTTTCCGATTGCTGTTTACA
TTTCAATTCTTGTTTATTTTGTTTGACCATCAGTTTAATTTGTTTTTCTT
CTTCCTTTTGTTGTTTCTTTATATATTGCTCTTCTAACACTTTCAATGCA
TCGTCGGAAGTAAGATGGTATAATGGAGCCTTCTTTTGGGGCATTTTTCT
TTGGAATTTTTGGCATTGTTAGAGCCTCTTTAGTTGAATTTGTTGTTTGG
CACCTTTCTTTGACGAGGTTGAGTAGTTTTGATCTTTCCATTTCTACCCC
CTCTTTCAAAGCATGCCAAGACTTAAACAAAAAGTCATCATTATTAGGTT
TGCACCCATGCTCAAATCTCTTGTTGAACAAAATATATTGGTCTTTTGTC
AACAATTTTTCGAAATGCAAAAGTCCCTTCACTAGCATGGAGTCGTTGAT
GTTTTTAATGGGAGATANAAATGCAAAAGTCCCTTCACTAGCATGGAGTC
GTTGATGTTTTTAATGGGAGATGAAGAAATAATGTTTGTGGTATCCAGTG
TGAAGCTTGTTGGTGGCGTTGAGATGATACAATCGGATGTCGAGGGTAAG
GAACTATTTTGGTTTAAGGTTTGAAAATCAACACTGTTGTCTAGTTGCCC
TGATTCAATAGATGATTGGTAGGTTTTTTCATCTGGTTGGTGTGGATGCT
GCTCTGTACTGTGGGGAATTGGCACTAGACGACGTGGTTGTTCGAGTTGA
TGGTGTGGTTGTTCTGGTTGGCAAGAAGGCAGTTGCTCAGGCTGACGTGA
TAGTTGCTCTGGTTGATGGGGTGGAACAAATGATTCAGCTTGTCCCAGTC
CAAATTTTCTCTATGTAGTGGCCAGATTCCAGTACTCCGAAAGGCACTCA
TTATATTGTTAGGAGTCAGAGCATCGAAATAGGTTCCAGTGAACAATTTT
CCAAAGATGTGCTTGTCAATCACCCGTTTAATGGGTTTCCCAGCATTAAA
TATGTTTGTGTTTGCTTGCCCTAAATAGTTGTCGCACCTTTTGTGGAAAA
ATCCTTTCATTGGCCCGAAAATTCCAATATCGAGCGGCTGGAGTATATGT
GAAGCATGAGAAGGCAGACATAGAAGTTCAATTTCATTTTTCTGGCAATA
TTGGGATGCTTCATAAGTAATGTGGGTACTGTGGCCATCAAAAATTAAAA
GGACTGGTCTTGTTGGTGGAATGCGTCTTAAAGATACTTTTTCGATCAAG
TGGCGAAAGGAAGGTATGGTTATCCATCCTTTAGCAGTGGCCATCGTGTG
GACTAACTGACTTTCCAGGGTGCCAAATGAAGGGCGGTACACGTATATCT
GGATCAGCACCTGAACAAATTTAGACCATTGTCCTTGATGAGAAAAATGT
TTTTATATTGTTCTAAACTACGAAATTTGTGTAGTTTTCAACAAAGTTAA
TCCTTTAGGGAAATTATACAATTTTTTTTTTATTTTACTGGAGTACTCAC
AGGAAAAAATCTTAAAACTCTCAAATAAAAATCTTGCAAAAACTCTCTTC
ACTTCAGTTAAAAACATGTTCAAACTGATAATTACAACTGTTTTTTTTTC
AGGTGAGATGACATGAGATGATACTTACAAATGCATGCAAGACAAGTTAT
TTGGTCTTTCGAACTGTTGATGAGTTTGTACGCATGACGGACACCAAGAC
ATTACCATTGGACTTGTGTTGCAGCGAAAAACCTGACTCATCACAGTTGA
ATATTTGTGAGGCTGACTTTATCCCCCTCTGTTGACATATCTCCTCCAGT
TGGTTGAAGAATGTTTCTAGTTTTTGTTTGCTGCACATAGCTCTGGAAAT
TATCAATTTGCCAGGGCGTGCTAGTTTAAGATTTGGATGTCTTCTTTAAA
TAATTGAAACTACTTTTTTCCGGGATAATTTGAGGCATCAAACTCTGAGC
GACCTGCGAGGTCAAGGATTTGTTTAACTGTCATTCTCACTTGTGTCGGT
GTCTTTCCGCACCCAATTTTCGCCATTGCTTCCAACCACGTCACCAGATC
ATTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042743TCONS_00042743Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003644supercontigsc0003644:4492..7996 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0.15	0.21	0	0.26	0.08	0	0.7	0	0.08	0.57	0	0	0	0.12	0	0.14	0.39	0.14	0.24	0	0	0	0