XLOC_026531 (gene) - C. hemisphaerica

Overview
NameXLOC_026531
Unique NameXLOC_026531
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003632:1..7359+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026531 ID=XLOC_026531|Name=XLOC_026531|organism=Clytia hemisphaerica|type=gene|length=7359bp|location=Sequence derived from alignment at sc0003632:1..7359+ (Clytia hemisphaerica)
TGGCCAGAATTTCAACGTTTTGTAAATGGTAGAACAGGCTGTTTACCTCA ACAAAAAGGAATTCTATTCAACAGTAAGAGTTTTTTATTGTATAGTATAG TCTCTTTACCCcgaatctctataactcgaatgtctgcaggttttctggtc ccttcagttgATAATGCCTTATaaccttactctataactcaaaattcttt taactcgaaaaaaattGTGTTCGTCCTGCGTGTTTGGCTGACGGAAACCC TACTTGTCCATGAAGTAACGAAAACTTTTATTTGAATCAGTGTTAACACT CATTGCAATAAAAATacctgatttttttttcatactcATATTGCAATCCC TATTATAGAAATAGTGCCCCCCCCCTTTTGAAGACGGAGTAACCgagaaa aatttggatttttagtagaaggaaccaacccaggaggacacttTTCATAA TAGACGTAAAACTTTGGCCACCTTTTAAATGTTTAGTGATTTGcaagttt gatttttaaggGCATTTGGTCCATTCATTTCTCTTTTACAATTTGACTAA CCNAAAACTTTGGCCACCTTTTAAATGTTTAGTGATTTGcaagtttgatt tttaaggGCATTTGGTCCATTCATTTCTCTTTTACAATTTGACTAACCTT TTCGATATCCAATTTAGCTGATGAAATTCAATCTACTAATGTTATTATCA ATTGGTATACGAGAAATGAGGAGAGCATTTTTCCTGCTGCCAAATCAAGA TTATGGCGTGACGATTCAGAGCTCGAAGGGATGCCTTACATCTATTGTGG AAAGAATGCTTATTTCGCTCAAGGAATGGATGGGAAATTCACAAATGAGg tgattcattttgcttttaGCCAGAATGGATATGATTTGAAAGCCCTTTAA TCattataaagtttttcaaaagttaattttggaaattcttgtgctttttt aaagatataaaaacttttccttttatttattttcatgttCTTTATTgcga atttaaatttaaaattttgtttttccgtTCCAGGAAATAAACATGTTGGC AGAGGAATCCTACGTTGTCAGAAAAATCATTGTTTTCCCTGGGTTCAAGG TGTGAACTTGCTTGTAGTTTAATCATGATGCTTTTTAGCCCTGCTGACCT AGCCAAAAAGGGATACACGATGATGTTTCATTGGTTATGGTATTTTTCTA CAACCTCGCTAGACTTtggcttttcaaacattttgggTGTAACGAACATC ATTTCTCTCTTCACCATTCAAACTAATCATGAAATTTTATATGAAATATA TATTACTTTCAGTTGTTTGAAGACAGGTGGAAGAAGAAGGAGGTCGAAAG GCTAGAATCGCTAATTCGCAAGCAATTGGAGCAAAATGATAAGCAGTTAG ACAAGAAAGTCGTTTTCCTTATCAATTTATCAAAAATGGACCGATCTCTT GAAAAACCTGTCAATCCATCCAAGGTAAATGCTGTAAAGTTTTAATCATA AAAATTTCTTGGCAGGAATACACGGTCTTTTTTTGTGATTATCAGATTTA AccctttttgaaatattcttattatATTCTTAATATTCTCTTATATCTTA CACACTTACTTtgttgactttttggcttacaAGGGTTGCATTACCTTTTC TAATTCAATTCTTTTAAATCTCAGAGATTGATTTCAATTTGTCCTtatgt tttgagaaaatctttgCCTCTTATAAAGTCCTAATAAAACTCTCATTGAA AAGTGCGTACCTTATCGGTAGAAATTTCGTCGGTGGAAAATTTCGTCGGC AAAAAATATTCGTCGGCAAAAACTTTCGTCACTAAGCGATTTTTTCGTCC CTTTTTACCGACGAAAtttctaccgataaggtatctgctacctactctcg ggtacctaatagcccccccccccccccttttttttccccccccccccccg cttattaatttttcgaaaattttccacccaggacattcttattcccaatc cccccccccgcttattaatttttgggaaaatgttttcgaaagttccctct tttgtcctaattctgctgtattagcctccttttcaaaaattttccaccca ggacatttttattccaacctccccgcttattaagttttgatatttttttg gaattttgcaACTGAATCTTAGAATTTCCCTCTTAGAGCATTTTAAAatg taaattgccaattattcccCAGTAAGACTCAAACAGTTTTAAGAAATTCC ATTTTTTGCTTCAAACTATGCTGAgtttggatcctaacctaagaatacct taagaagatgatttttctcaaaaagtttagtctagcaagctagacgacta attcatacatagtagaaataaagcaaaaagtaataaagtgaacaatttta gtcgtctagaaacctttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNaacgaccgagcttgcgaggttgttgcgttgaccgagggcaatatttt cagtacagcccgaaaaaaaccggtcattattgtatttgttaacctttttc cttcagcttcgattgattttgagCGCTTTAttcaggaaaaatagcgaaat aaagcagaaaaaacaagcgaaaagagatgNAAAAAAAAAAGCCtgtatat ttttcgagttcagaatTTTCGTCATGGATATTGTACGAGTGaaagtgtga taactggtttatcatcaACTTGAAACAactttagccaatcagattgctta tatttttcatattgatgATAACATATTTTAATTTGTTACAGGCTGTGAAT CTTCATGTACGAGNaaaaagtgacgtcacaatgaattttcctaacgacgg gcaactctggacaatgtaggcccgtcgtcatgcgaaaagaaccaattgca ttgcgctaaaagtcatgtagcccgcttcgaaaaagtaaccggttaacaaN GCAAGGTTGTACAAATACTGAAATACAACAAGGCATCGATGATTTTGTGG CTAATGAATTATTCATCAATAAAACACCTCCATCTAAAACAAATGAACGC TTCTATCCACCCTTCCCAAAGATGAAAGCAGTAAGAGATAACGCGTTATA TATCAATACACTTACTGCAGATGACATTAGAAATTTGGTTAAGTTTTTTA ATACTCTAAAACTCAATGATGAATCCGATATAGTGTTCAAGGTTTATCAA TCTCAACCGAGAAAAGCAAAAGTTAAAGAATTAGATACAGAAAAAGTTTC AACGTCTGATGAAGAACTAGATTTATTACGTCAATTGAAACTCGGGGAAT CCTATAGTAGAAGAAACTTTATCAAACCTTCACAATGGGATTTTCCAATT CAGCAATATTCTTTACTTCATCAATCTGAACCCCAGCAGTACTTGCTCAA TAAGTATGGATCTACAATACACATTGTTGAGATTAAGGCTGAAGACTATG GTTTTAATATCATTGGTGTTTCTTTGTTTGTATTGTTTGTTCGAACCAAT GTGGATTATCAAGTTGTTGGGACAATACTTTGCAATCGATACAATAATCA CACGAAAGTTTTGAAAGAAGCTTTGACAGAGTTTAAAGAAATCAATGAGT TTTggaaaccaaaatatctcatgATTGATCCCTCTGAGTCGATGGTTGCT GCTGTCAAGGATGTATTTCCAGGTAAACTTCTATTTATTTCCATACTACC CGTAAAATTTGTTCCTCTTCAAATAAAAATGTGAGAAATGTTTTGACTGT TTCTTCAAAAGTTTAGTTCAAGTTACTTCGTTCTGATGTTTTTTGTTAGA TTTTGGAGAGTCCAATTAACGACACCTCATTTAACAGTCATACAAAGTGA GGTTTATTTCGTAATCCAGTTGAAGAAGGAGTGTCCCGAGAGTAAAAATT ATCTTGAAATTTCCAGGCGGTAAAAGACTGGTTTAAGTTCGTCAACCCTC ACTTTAAAGAATTTTCCAAGGCTGTCTTTGCAAGTTTTGCCAGTTTTGCC AGGGAGTTATTCATACATTTCCGAGTACTTCTTTGAATTAAAAAGGTTCT TCCACCCCCTGTATAGATTTTTTTAATGGGACAGTCCATTGAATGTCGTG TAATTTTCTTTTGTCTTCAGGATCTGAGttctttttcaacaaagaatCTT GCATACGAGAATGGCAAACATATTTGACAGATCCTTCAAACGGTGTGAAA GATCATTCCGATAAGATTCTTGGTCATTTGAAAGCACTACAGATGGCAGA ATCGATTGATGAAGTTGACCGTTTGATGGACAACATCCCACCTGAAGAAG ATTGGTTGAAATCTGTCGAGTTTTCTGGAGATGGCTTCTGGATATCACAA TACGAGGTATCGTGAAATTTGTTTATGAAATACCATTTTTAAGGTGTTCA AGTTACTAATATAGTGGAATCTCTTTAACTCCGACCTCTagaactcgaat gtctccttagctcgaacaagttttatggtcacttcagttaacaatgcttt ataaaccttactccATAACTCGAAATTCGAACAGATTTGAGTTCCTCATG TTTGTTTTACTACATTCCAACGGACATCTATCAATCCAGTCTATTTTCTC AAATTTTAGCCATTGTCGGGAAATTTAGTCCTCGCCTAAACCTCTATGAA AATAAGAGAAATTTGTTGTGAAAGGGACCGATTCGCAAATTCGCGAACAT TTTATAAATTCAATACACCAAAAAAATCCAAGCGAAAATTTATCCACCTT TAAAGGTTTGTTCTTTTTTCTAGCGCAACCGATAAAATGATAAAGAATGA TAATTATCACCAGAGTTTTGTTATCTATTGCTTTCAGAAATGGATGAAAT GTTGCTTACCAAAGGATTTGATATTCTTTCTACGAGACGACTGGCTTCGC TCTGCTGTTCACTTTTATAGAAACATCCTCGAATCCTACTCAAAGAAGGA CACCAAAGGGTTGATGATGTTGATGGCGAAATTAACGGACGAGAAACCAA AGTCTCGCTACTCGGACAGGTATCCTTGTTCCTAATAAAAGAAACAATTC TTCAGCTATTTCACCACTTTGAATCAGAAATTTAATATCGTTTATCTATG ACCTTTCAAATAGATTGCTCTCTTCTCAAAAAAGGAATGAAGTTCTTCTA AAAATTAACAATTTTTGATAATTCCGTTGAAAACAGCCAAAATTCACAGG AGCTATGCACCCAGACTTTAGTGGTTTAAAGTACATCTTGTCTATCTATT TTCATTATTTCTCATCGGAATAAAGCAGTTTGGCCTCTGAATGATAATGA CAGTTCGTTTCAAACTAATATTGACATAACTGTCATCAGGGGTAAAAATT TCTAATCAGGGAAATAGTATTGAGCCTTTTTTAGGAGTTTAGAAGTTGTC GTAAAGAATCTCGTTTATTCAATTTTTTTAGTTATGTCTTGAAGAATGAA ATGTTGTTCAAAGATGCCATGAGTGCAGCAACTCGCTATTCGTCATTCGA AAAAAACTTTGGTCTACCATCATTCATGATGTCTCATTGCGCAAGCATAA TGGACAATTCCCAAACAACAAAATCAAACAATACCGGACATACAGTTACC CTGGGAAACCAAAGAACTTTCCCATCATGCAATTGTGAAAATTGGAAATT TAACAGAATGCCTTGCGCTCATTTTCTGAGAATCTTCAAAGAAACAAATG CTCGGTATTCTTCCTTAAGTCCATTGTATCGTGCAAGTCCTTGTTTTCAA ATCGATTTATCATGCGTTCGGAATAAATCAAAAAGCTTATCAAAAGGCAA TATTCTTCCATCGGAAATTGTTTCATCAAATTCAACTGCAGAAATATTTG CATTGAAAGACTCTCCGATTGATTTCCAAAATGAATCGAAACAGTTAGAT GAGAATGAAGTAAGGGAGGACGTTCATTTTTCGAGTAACGAGAAATCATC CGCTCATCACCAGGTACCACAAATACAATCAAAGAGAGAAGACGAAACAA TACTTTCCCAGAAAACGCAACTTAAAATGTTACCAAATACGGCTTCCAAG TTACCTAGTTTAACACCAATTATTGGCGCAAGGGTGTCACCTATGACTCC AATTTTTGGTGGAAGGGTATTACCCGTGACAAACATTTCAGATAAGAATA AAGCTTCACAGCAAATTGAAAAGTTAAATAGCATACCATCTGAAAATGAG AAGATTCGTGCTTGGCTTCAAGAACAAAAACTAAGGAAAGAAGATGATAG TTCAAAAACGTCAAGAACTTCAAACCATTTACAAAATAAAAATTTCAAGA ATGTACCAACTGTCAGCCAACCTGAAAATCCCTCTAAGCGTAAAACAAAT CGCGAAATTATTGGTGAAAAACGCAAATTACTTTCTAAAACGAAATTTCA TGTTTCTACAAATATTGCAGCAACCACAAAGAAATCGAAGCGGCTATCAC AAAAAATGAAACACAAAAAAACTTCACTACAAACTGAGAAACAAACTTCT AATACTACTGAGCAAGAAGGGACATGTTCAAATGCAACAAAGTTACAACC TAAAACGTACCAGTATGCATCTTATGTAGAACCATCAAAACAATCAGCTT CTTCATCAGTGAGCAGTATTCAAAGTGAAGGGTTGATTCCAGATGTTGAA ATCAAGGTCGAGTCGCAGTCTATCCGATTTCCATGAGGACATAACTTGTG AAGAGTCTGCTACTTTGTCGAGCAATAATGAAAATTTATGATAAATTTTC ATGTGCAAAAATCAATGGAAAACGATTCAGTTTGGAATTCCGTTTGAATT TATATTTCTTATAAGCTGAGAAGAACAGAAATATATTTTTAACTTAAGGC CCTTGTTATCAGTCATTTAAAAAAATGCTCCCCCTGACTATTAAAACACC TTGACGAAAACATTATCTTAGGCTCTGGAAGGAAATATGTTCCATATCAT TGTTTTCCTGTGATTTTTAATATCGCTTATAAAGAATGTATTATATTTGT ACCTTAAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042724TCONS_00042724Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00042724-proteinTCONS_00042724-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003632supercontigsc0003632:1..7359 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.63 6.42 4.95 4.58 6.85 5.48 6.7 6.91 3.5 4.08 3.91 2.54 2.2 1.86 2.18 2.48 2.82 2.64 1.35 1.37 2.26 2.09 8.61 7.87 3.75 5.38 2.27 1.89 5.87 7.43