XLOC_026172 (gene) - C. hemisphaerica

Overview
NameXLOC_026172
Unique NameXLOC_026172
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003344:3516..9559+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026172 ID=XLOC_026172|Name=XLOC_026172|organism=Clytia hemisphaerica|type=gene|length=6044bp|location=Sequence derived from alignment at sc0003344:3516..9559+ (Clytia hemisphaerica)
NNTTTTTTAACATCTCAGAAGTTGAGacgtttttatcaaaatatactGTC TTAATCAAGTTCAATTTCCTTTGCTCTTGTGTTGTTTGATTGTTAAATTA AGCCTAATAGGCCGATTGGGTTCTGGTTAGTCAATACGCAGGTCACAGGA CATATTAGCagactgaaaaattaaaaataaatgtatcattattgtatttt tatCCATTTCCAAGACTTCatacaattttttcatgaaCCGCAATGAATAT CAACGTAAATGGAGAAAAGATAATAAAAGGAtcgaaaacattttaaaaga ccTATCTTCATCTGAAGAACCTTGCGTTACTACAGAAGATGAAATTGTGT CTTGCAGCCCTGGCCCAAGCTATGAAGAAGATTTGCCATTAGAGAACATT CCAAGTGATGAAGAACAGTCTGACTTTGAATCGAGTAGTGACGAAGAAAT CCATAACTTTTTTAGGGAACATATTGATGGCTTAGAGGGAAATTGTGAAA ATGAAGAGGTCTTTTCAGATTTCCCTTCAGATCTCGCTtcttggattttg aaaaacaaaataactAGAACGGCTAGTGATGAATTACTTTCCttacttaa aaaaaatggaCACGATGAGCAACTACCAAAAGACACAAGAACACTACTTC ATACACCTCGTACCTCTCCAATAGTGTCTAAAGCTGGTGGAGAATATTGT TACCTTGGCATTAAGAAAGGAATTATTAGAGCACTTTCAAAGAATCCAGG AATAAATATCCCTGATAACTGCATAAAGTTATGTGTTAATGTGGATGGGC TTCCAATATTTAAGTCCACCAATGGTCAATTTTGGCCAATATTGTGTAAC TTTTCCAAACTGACTCCATTTACAGTTGCCCTTTATTATGGGACTTCAAA ACCAACTAACCTTCGTGATTTcttaaatgattttctttttgagtATGCTT CTTTGAAATTGGAAGGACTAGAATTCGAAGGAATATCTTATCGAGTTATA ATTTTCACTTTGCCTTGTGATGCTCCAGCACGTCAATTTTTAAAGTGTGT CAAGGCACACAATGGCTATCATGGTTGTGAGCGGTGTGATGCTAAAGGAG AAAGTATTTCAAGGCGTATGGTATTTCACAACCTTGATTCTGACCAAAGG ACTAATGAAGCGTTTGCAAGATTTGAATATGCTGGAAAACATCAACTTGA GCTTACCTGCTTGGTGGAATTTGGCATTTGCTGTGTATCTCAATTTCCCC TTGACTACATGCATCTTGTGTGCCTTGGAGTTGTCAAAAGACTGCTAATT GTTTGGAAAGAAGGTGACAGACGTTATAAACTATCTGCTGGTCAACTAAA TAGGATTTCATCTTCTCTAAACAGTATGAGTGGAAAATTTCCATCTGACT TTGCTCGCCAACCGAGAGGTCTCAAGGACCTAAAAAGATGGAAAGCAACT GAATTCCGCCTTTTTTTATTATACACTGGATTTATTGTTCTAAGAGATAT TTTGAGTGAAGACCGATACAAGCATTTTTTATCTTTGGTTGTTGCATTCA GAATTTTACTTGAGTCTAATGATTTTGTACGAAATGAAAATTTGGAAAAT GCACGAAAATTATTGACATATTTTGTCAAAAAGAGCCGATATTTATATGG TACCACGTTCACTGTTTACAATGTACACAACCTTGTTCACATATGCGATG ATGTGGAATATCACAATTGTTCATTGGACTCTATTTCTTCATTTCCATTT GAGAACCATTTACAATTTTTTAAGAAGTTCATCAGAAAGGCACAAAATCC TTTGAGTCAAATTGTAAGAAGAATCCACGAGTTTGACGAACATTGTATTG ATTTATGTACCAAGAAACATTTGGTAACAAAACTTTCGAACAGTGCAAAG GATTCTTGGTTTCTAACAGGAGATGGAAACTTTGCTCAAATTCAAAGTTC TCCAATGAAAGACATTTTCAATTGTAAGGTATACAGATCTTCTTTATGTC AAGATTTTTTCTCAGTGCCATGTGCTTCGAGAGCAGTAAACATTGTCATG ATTGGAACCAACTATAAAGGTCGTTCACAGGATTTGCATAAAAGTCAGTT TTTAAGGAAAGCTGCTTGTGTGGAGTATGAGAATGGAATGATTGTATCTG CATTgttaaatgatattttttaattcCTAAAGtattattttaacagtttt tggTGAATGGCACAAATTTTTTATTCTGGCGAATGACTgggaaaaaaatc tcttttttttgccttattttgagcatttttttgaaaataaggtaattttg gaatatttccaaaaaatttaaaatcgccaagaactaattttggcaaattt tgtccCTTAAGGTACCTTATTGACACTAACGTTGTGGCATGATGTGAATa accaaaaaaattttagaaatatactAGAGTTTAATATtccaaaaacctga aaaaaaaagttgtaaatatttttatcagtTAATTTCATACTTGTGAGTTA TCATAACCCTTTATACTAAGGCTAGCTTTCTCCACATCCAAGCTCTCTAT GTCTACTACTAAGTCACTTAATTCTGACTTACATCCCTATTTTCAACTTT ATCATTTTCCTTCCCATCTTCAGTTCTattaaaattttctagatttgcTT GTTTACATTTCTGGAAGATTCCCTGATCTTCTAGTTTAGCTTCCAATACT AGGATATAAGATGAGATGAGATCTAGGCTAGCTTTACTAATTTATTAGTA TATAATATCGCCGTCTACGTATTACATAGAATTTTAGAAGTCTATTTACA GTAGGGGATTCTCCATCTTTATCTACATCAGATTCCAATCTCGTTTTCGG TTCCACTTTCTGGGAGATTCCCTCGCTCATACTCAATTCCAGTTTCAATT CTGGCTTCCAAGCCCTTTTTAGCGGCCTCATCATTTGAAGGGTCTGCTTT ATATGTCTTCTGGAGGCAAGACCGTTCTCCAACTTCGGATAGGCCCCGCT GGCAAGAACGGTCTCTCCTTCACATGGCATTAGCAGAATTTTTCGTGCTT TTCAGTTCccttttttggtaataaaaattcttgttcttattttgttgtct aagaaaaacgaaaacgatgtatattttttttttcttcaaaaacctttatt atatataatatatatatatatataNAGCAGAATTTTTCGTGCTTTTCAGT TCccttttttggtaataaaaattcttgttcttattttgttgtctaagaaa aacgaaaacgatgtatattttttttttcttcaaaaacctttattatatat aatatatataggtgataaaagagatgttaaaaaaaaacaaataaaaaaaa ccaaaaaaactatGTTATGAGACGGGAGATTTTTTTGGAGATATAAAAGT GACTTCTGTTGTTTGCATAAGATATGTggattttatttcatatttattaC TCTTTTCAGTTTTAGTAAATAAATCAGTAAAAATGCCAAGTACTAGGAGC TCCAATCAGCAACAAACTATTGAGTGGTCTCTTGTAGTGTACCATGATGT TACAAAAAGCGGACGCAGAATTGAAACTCAGAGCATTGTCCCCAGTCATT GGGTCTCACAAAGTCAAACCATCTTATATTGGCCAGACACACTTAATGTT GAGTCCAGAAAGCATGAACACCCAAGCTGTGACTGGTTCACCTTTGATGT CTTAAAAATCAAGTTTACAGGTAACAGTAAAatcctatcaaatttttaaa tttagataTTATGCTCTTTCTGAAATACTAAAACTGTATGCTCCATAACT GGAATCACCTGTTTTCATCTCCTCCTTTATCTTGCATGCTCATTTTAAAG CATCCCAAAATTTTTATTACCTTTTTTTAATTAGGTTCAAAAGAGGAATG TGTAGAGTTGGAAGGTGCAGGCTACACAACAGCTGCTGAAGAATCGGGAA ATGATAGAGACGGTACGTTTTATTACCTAGAGGAAATATTATTTTtgaca ggaatttaatttggctgattgatgaactgaagttttttcttgttttgttg ctttctttttgttaaaaaaaatatgcaGTACTAGTAAATAGGTTTATCTG ATTTGTTTTGGAAAATCGTTTTTGAATTCGTGATATTCTTGACAATCTTT TCACTGAAAACATTTGAGCACTATTATTGGTGGCAGAAGATTTGCCTGCT ACAATGTTTTTCAAGcaaagaccccctggaaaaattaaaaaatcaccaCA CAAGCTCAAATACTTTAAAGAAAAACCCTCATTTATACAAATTCTTTAAT TATTTACAATCaatgttctcaaaatttttaattttatttgagAAAAACAC TAAAGCTTGGTCCTTActtgttgaaaaaattgtcTCTAAAGCATTAGACT CCGACATCTAACTTTAGACGCCCGTGACTAAGCATTTGAGACCTCTAGTG GGTACACTCGTAGACACAAGCGTTAAATGTTCAATAAACACCTGGATCTA GCCCAAATTGGTTAGACACGtggaacaaaaaaattttgttccaGGCATCT AAAGTTCAAAGACACCAAAATGTAAATAGGATTAAATCTATTCAATTCTT TAGTGATTTCCCCtcttccactttcgattttactttctcttttaattttt tatcaaaagtttccTAGTGTGTGCAAAAGTTAGATGCAGGCGACTTTTTT CAACAAGTGAGGACCAAGCTTTTAAGTTATTAGGCTTCCTTTTATAATAA CCTTTTGTTTCAATATACAGTATGTCCTgaaaaaagcggacaaaaattta tatataataaaatcctcaaaattctCTGCCTTTTATGGGGTTTGAATTAA TGATTGgatattagaatttttttgcttatacaaaagatatccaattttcc AGACAATtaaattacttttgaaaaaaaaagataaacaacaTATGTGATTT ATCGTGactagaattaaaaaaaacaaaacaacatatgtgattaaaaaaaa aaaacatgtgatTTATCGTGACAAgaattttcaggattttactttataca aaaatctgtccgctttttttgggacacaccaCACTGTAAAATGTTTCAGC GGGTCTAATTCTATGCGGTGAGGTGTTGCGCAATATCTATTGTGGGTCTT TGTTCACAAGAAAAGATTAAATCATGACTAGCATGAATATGAAGCCTACA AACCCTGTGCAGAGAAGTGTTAATAGATGAAACTTTTTTAGCTTCCATGG ATTCACCAACTTCGGTTGATTTCAACAACGATAATTCAAATGGTATGTCT TTGTTCTGGTACTTTTTTCTGTATACGTTTTTAATAACTGGTTTAAGTGA ATTGCCCATCTGATATACATGATTTTTGTAATTCAGGCCCTTCTATATTA GAAATTTGAAATTGCTCTTGGATTGCCCTTTTCTATACTGTAacaatctt gaaatattttcctCAATCAGActattttgatttcaatttgggttattttt atattattgtaGTGCTGATGCCATCAACTGAAATGACAAGTCTCTTTTCC AATCCATCGATGGCTTCTTCATCAAAGGCTTCTTCTGAAGCACCCAAATC ATCGGTTTCCAGCCTAAAACGTCACAAATCGTTCGCCAATCTATCCCTGG CTTCTATTGCTGAATCAGCCACAGCACCAGTATCTCTACCCAACTTAAAT CGTCAGAAATCATTCGCCCTTCCATCAAAGGCTTCTATTGCTGAGTCATC CCAATCATCGGTATCTCTACCCAGCCTAAAACGTCAGAAATCTTTCGCTG TATCAAAGACTTCTATCGCTGAATCAGCCACAGCACCGGTATTTCTACCC AcccccaaaagtcaaaaatCGTTTGCAAATCACTCAATGACTTCTAATGC TGAGTCACCCAATGCATCAGCATCTCATTCTACCCCAAGAAATAATTCTA TTGCNGcccctccttattcccatcttattccaaaaatcaaggttgcttgt tcccaatagtgtatggtagttacttgttattacatgaatcttaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042316TCONS_00042316Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00042316-proteinTCONS_00042316-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003344supercontigsc0003344:3516..9559 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.1 2.8 4.09 3.94 9.21 7.78 19.97 19.89 8.95 10.43 6.99 5.9 5.46 5.8 5 4.65 7.22 6.69 4.64 4.3 8.76 7.84 6.58 7.14 9.72 13 13.44 11.08 8.69 8.51