XLOC_025829 (gene) - C. hemisphaerica

Overview
NameXLOC_025829
Unique NameXLOC_025829
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003106:35..3644+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025829 ID=XLOC_025829|Name=XLOC_025829|organism=Clytia hemisphaerica|type=gene|length=3610bp|location=Sequence derived from alignment at sc0003106:35..3644+ (Clytia hemisphaerica)
GTCAAGTTAATGGCATTGTAAGGACTCTCATTTTAACAATCAAAACATTG
TCTAAACGTTAACCGCCTAGTTTGAGTACATCACACTCTtggtctttttt
gttttttcagatTGTGGGATATCGAATATATTACAATGTGTTGGATTGCT
CTAAAGCAGAATTAGCAGATTGCAATGAGAACACAACGTTTGTTGATGAA
GTGACCGTACCTGATCTCCTCCACACGATCAGCAATTTGAAGAATTATAC
TGAATATGAGATTCAAATTGATTTGTTCAATTCTCTGGCAACGGGACCAA
AATCACCCAAAATCATAATTTCTACTGATGAAGACAGTAAGCTACTAGAT
TTCACTCACCATttttgataaatgaaaaaatataatttttttggctCTGT
AAGTTATCGGTGATATCCAGAAGTTTTCTCAGATACTATGTTGCTTGTGC
TCTATATTGATTGCCATTCACTTTTCAGTTCCTGAATCGCCTCCCACGAA
CGTTGAAGGGTTCACGATGTCGACGACAAGTGTTTCAATTTATTGGGATG
ACGTACCATGGGGAACTTCTCATGGAATTATCACGGGGTATGTTTGTTAT
TATCGCCGTATGAATGATGGTCCTCCTGCCGACGAATTGAGAATATTGAT
GCAAGAAAACCAGTAagttgaaatttatattttaaatctcGTACCTTGTT
GTAAACTCTTTTTGAAAGACTCCCATTTCATCAACTATTTTCTTATCAAC
TATCAtcccatttttagaaaaaggaaACGTCGTTCCATCGAATCTTTTGA
AATGGATGACTATCTTACTAGAAATCAAAACATGTCATCCGAATCAACGC
TGACATTGACAAGACAGAGACGAGCCTTACCTAGCAGGGGATATCTTTAT
CTTGAAGAAGCTCAATATGCGAACGCCAGTGAATCAGGAATGATTATTGA
AGATTTAGTTTTGTATCAGTGGTATACGTTAAGGCTGGCTGCGATGACAA
GTAAAGGACCTGGACCTACTTTCGATTTGAACGCCTCTTGTGCTCAAGCA
GGtataaacaaatttttttgatctcAAACAAACAACTAACAATAAAAACT
TATGATTTATTTTAGCAATTTTGCTTTGCCCAAACCTTTTAAATTAAGtt
aagttctttttttttttagttcctGTTACTGGTCCAAACATAACAATTTA
TGATAAGTTCTCCTTCACTGAATTAACGTTGAATTGGTCGACTTTATCGT
ATGCAGATTCACAGGGGACAGTTTTGGATTATAACATCATTTATTACCCA
GTCAGAAGGAATGGTATTGATCTAGCTCCCGTTGATCAGGTAAAGTTCTA
CTATTTCTTGTGACGGTGGCGAATTGTTGTTCTACGGATCAAACTCAATA
ATAAAAATGGTAGCAATAATGACAAATTTATAGAAACAAGATTATAATAA
CAAATATTATGGTCGGCCTTAATTGCAACGTCAGAAGGTAGGAATTTTAG
TGATGTGAGTTATGTTCTCATTTTTAGGATGTGACAAGCCTTTGGTTCGA
ATTTCCAACACAAGGTGTCGAGCTTAACAATCTCGAACCTTTCGTCACTT
ACGCCTTCCAAAGTGCTGCACAGACATTCGCTGGACCCGGAACTTTCTCA
AAGCCTTTTTATGCAGGTAATTAAATCCGTCTTATCCATCCTTATTTTAC
ATACCTTTGTAAAGTTTCAGCTATTCAACACGCCTTCTCACAGAAACTAA
GGAACAACTCTATTACTCGAACTCTTTATGGTTCAGTCTTTCAATATTAA
ATATGCTCGGAGTTGCTTCAGGACAAGTACTTTCTAAGGACATTCAAATC
ACTCTAACTCGGACTTCTATTGCTCGAATCATTCTGTAATCCGAACTAAT
ATATTAGTGCCCTCAGCTGTAAAGTTGTCCAAATTACTCTGTTATACGAA
TgcttctctaattcgaagaacattttttggTCCCATATGTAACCATCCAT
ATGTTGCCTTCAAAAGTACCCTCTGAGGTTGAGGTCGAGGTTGCCCTACT
TTGTGATTTAGAGTTTTTCTGACCTAGACAATCTTTTACGTACGTTTTAT
AATTGTctgtaattttgccagaaacctGCCGTtgcgaaaaaaacttcaaa
gcaGTCTATCGAAATCACATGCCGTACTTTGGAATAGAAAACGGGGAACA
AATTGGATTACTGAAGAACCTTGTAACCGCAGCAACCAATCTCTGTTGTG
GAAATTGTTCGAATGGGCATGGGGCCACAAATATCATCTGGGAAGGTCCC
ATGACGAGTGTCAGCGAGTTAAATGATGCCATTTTTGATGATACCGACTT
CGTGTTGCCAATAGAAACGGATAAAATAAACACATACTACAAAAGTAGAC
CGTTTGTCGGGATTTTGGATAGCCCAGGAGTTTCCGTATTTTCGCTGAAA
GTTGAATATTTGAATTTGACGAATAATATGATTTTGAATGGAGTGTTGAT
TTTGTGGTCTTTTGTGGTGATTGTTGCTTTAATAGTGATGGCTCTTGGAT
TGATCATGTGGATTGTCGTAAGtcgaagtttttgaaaatgtcctCGTTCT
TTGAATTATGTATGATGAGATACTTATTAAATTACTCTCATTGAGCCTGC
TTAAACCTGAAATCATTTCATTTTCTCTCTTCGTAGCAATGTCATCCACT
TCAACTGAACCGAACGAATCAAGAAGCCTTCCCTGATACTTTTTCCCATG
GCGCTGGCGCTGGACTTTGGTGGGCTTTCAATACAGTTCTCCGTATTGGG
CAAGTCTTTAAATTACGCTTTTAAAGCCATTTCAAATAAGACGTTTACAA
GAAGTTTCTAAACGCCCAATCACGTCACTCTTACCATACAATTTTGAGCT
TCGTCAATTGCTAGGGAAATACCAAAtgattaaaaattgatttttcttcc
TATCTAGATACGGGGACATCGTTGCAACTGGAAAACTCGGTCGCATTTTT
TCTATTCCAATAATCGCTGTAGGAATTGCAATAAGTGCTACATTAATTGC
CGGTGTTTCGTCCATCTTGTTGGCTTATTCTGTTCAAAAAACTGAAGGGA
GCATCTTTTCAAAGAAAGTTGTAGCAATGAATGAATCTTATGATCAATTG
GTCATCAAACGGATGGCTGGTATCATCTCAGAAAGTAAGTTCGTCCTCAT
GTAGTCTGAATGGCAGACCCCCGGGTAGTAAGAGGCACGATAAGGAGCAC
CAATGCGTTAGTGGATGTCAGCAGCATACCTCTTGTGTATTTACAGTTTG
TAATCTGCTGCTCtcttaaaatgtaattttgCTAACAATCATCCTTTGAA
ATTTTCCCTCAATAGCGGCTGGTGACACAGTGGAATTGATTGAAGTTTTA
CGTAGCAAACGTGTCGATAGAATGGCCGTTGATGCAATTTATGCTGCCTA
TCATTCCGAAAAGATGTCTGATCCTGACGTCATCTTCAGAGGTATCAAAG
AATCAGGCGCTACTCAAGGCATTGTCTTCGGTGGCAGAGCTTTGAGATTG
GAGAAATGTTTTAGGAAATATTTTCATGATAAAAAAGTGGAATTAATTGA
ACGAATAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041935TCONS_00041935Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00041935-proteinTCONS_00041935-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003106supercontigsc0003106:35..3644 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.75	6.54	3.96	3.14	1.85	1.06	1.51	1.35	0.79	1.45	1.16	1.1	14.09	17	4.38	4.08	0.82	0.69	26.11	20.44	0.97	1.51	4.9	5.04	20	6.91	0.64	0.52	3.44	4.5