XLOC_025653 (gene) - C. hemisphaerica

Overview
NameXLOC_025653
Unique NameXLOC_025653
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002994:9904..15217+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025653 ID=XLOC_025653|Name=XLOC_025653|organism=Clytia hemisphaerica|type=gene|length=5314bp|location=Sequence derived from alignment at sc0002994:9904..15217+ (Clytia hemisphaerica)
agatttctttcGATGAGTTAAAGCAAGCGATGGAGACTAAAAATATGGAA GCTGCAAGTCTGGTATTAATTTCTTCATTATATTGACCCTTAGAAACCTT CACGGAAAAATGGTCTTTGGGATACATCCAGGAACTAGCCTCTTACACAC AAAATAAATTATCAATGATAATCTTAAAatgcttcaatctttttttcatt AAGTACACCAGAGTACACAAAAGAAGGGCCCATCGTAATTATAaccattt ttttctttgcttcAAATTAAAGCTCTTCAGTCAATgggaaaaagaaacaa aaggacAGCAACAACATGAGGCAGCTGGGAAAATTGAAATAGGCAAAAAA GGAGCCACGGCAAGCGACAGGAAGAGATGGCCATGTCCTGAATGTGGGAA TACGCCCATCAATCTCGCCAGACATCTATCTACTGTCCACAAAGATTTAG GCTGGACAAATAAAAAAGCTGACAGGTATTTTATCCGTAAATTCTATTAA AAATTCCTGACAATAATGTAGTTTGAAGATAGACTTTCTTGAGTTTTTTG CTACCAACCTGCTCGACTTCAACGACATAGATATCAAGAGAGGCTGTTTc aatcattgagtttcaagcccgaagggctagaggtcaatctctttggtagg atttgaagccaacaaatcctaccaaagttgcgcggccttgattgagcgac ccgcctggtttttacacaaatgacagattgaaactaaaatttactgctta atttcgaaaattatatcactcgaaaacaaaggaattgctagattcaatcc gtcatcaaaaatacggtgcatattttaaggcttcaatttttcttgcctga gacaggttagagattgacctctagcccttcgggcttgaaactcaatggtt tcaATTCAAGGTCTCTTTTTCAACCTGTGGAAATATTTGACATGTTTCCA AAATAAGACAGCTTCAAGAAATGGTTCTGGCAGGGCTCTTTTCGTAATTT TAgcactttttcaaagattttggcgTTTTAACTCCAGGGTCCGAAAATTG AGCAAATTGAGCAAGTATTTCCTTATAACACCCCTGTGCCACAGACCCGG TAGACTCAGCCCCTCTggaaaaaatggctaaaaatttcAACCTCACTGGG AAGTTAGGATATGACTTTATCCCCATTAGAAACTGAATGGAAAAATAATG GACTAGAATTTCTGCGCtggaaatatattttatttctctATTAGCAGGAC TTCGATAGAATTTTCacccccactgagggaaaaagctCCGAAGGggcact gatacaggggtgtgttAAATCATTATTAGACCGGACCCATTTTAATCTCA AGTGATACGTCCCCATTGGTCGTCGAGATCGGTCTCCTGCGGGTCAGAGA TATCACACTCACTATTTAATACTACCTTTTACGTTGCAGGTATAAAAGAG AGAACAACATGCGGAAGGTCAGGAAGGATAAATTGCCAACAACAACTCGG AGGGTAGTTAGGCATATTTGCCCACTTTGCGACAAGCCAGTCGATCGCAT TCACGACCACCTTAAAAAATCCCCACACTGGATAGAGGACGAGAATGAAT ATAGAGCTCTTTTAAAGAAGAAAGTGCTATACGAGCCAGGAATTCCAGTG AAACCATTATTAAAATCTAATATTGTTCAGGAAATTATGGCATCAACAAA AATATCACATTCAATTCCTTTAAAAACCAATGACATTCAAGAATCAATTC CTTCAACCAATGACATTCAAGAATCAATTCCTTTAACCAATGACATTCAA GAATCAATTCCTTCAACCAATGACATTCAAGAATCAATTCCTTACAATGA CATTCAAGAGCCAGATCCAGCCGAACCAGCCGAAGACTTTGAAACGTGCT TAGGAAAGTATGAAAAGTACTTGTTAAGCATTTCTGGTGGGAGAAAGTCA GTTAAAAATGCTTTTGACGAGAAATCCCAAATAAGGACATTGGCTAAACT TTGTTCGAATGGTGAACCACTCAGCTATCGCAATGTACTCAATTTAAAGC TGGTGCAAGACGAGTACGTCTTCAAATACTCTAAAGAGAAGAAGCATACA CCAGGAACAATCAAATCATACTTGCTATCTCTCACACACTTTATGAATTT CCTGAAACGTTCCATTGAACGACCAGACGCTGACAACATCGTTGTTGTTG ATACCGATAAATTCCCAACTGAGAAGCTGCTTGTTTTGGAATCAGAAGTC AGCAAATGGAGAGAGTCACTTAGAGGAGAAGCGAATCAACGACAAATTGA GGTATACTTTTGTTTTCTGAAATTATTGTTCTTCGGTTAAAACTGTTGTC ACTTTAGAATCTTTTCTCATAAAACTTTTGCATATAAACTCCGTCTGAAG TGTAATTATACAGTATTCGTGAAAATAGCTATCTCAACCCACGACTCTTT AATACTTTTTTAAACGCAAGACCTTTTTGAAACCCGAGTCCAATACTTAG GTTTgataaaatcatgaaaataatgGCTCAACAAGCCTTACGCAcaggaa aaattcaaattcctaGTTGGTAAAACGATAAATTTCGAAAACGGTAGCAA TTTTTCGGATTTTCATTAAATAAAGTGTCAGTGTAATCCAGATGGTAAAA GTTAAATTTCCCACTTAAATTTCCATGTCATTAAGGAGTTTATCATGTTA AATTTAATCACTAAGTCTTTTCTCATAAACTTTTGCGTTTAAATTCTGTC CAAAATGTAATTATACATTATGTATTCGTCCACAAAATCAAATCTCACAT ACTTTATCGGGGAAATAATGTCGgaattttatttagtcggggtttttttt cgtcggaGAAAAATTTCGTCCCTTAGAGGCATTCTCccggaccaaaattt caaattcgtcacttttcctcGACCAAATTTACTATTTAGTCACTTCCacc cgactaaattgtccaaatgaattGGTTTTCTTCACTAGGCCGAAAAAGAT CTTGGTGTACAAATACTTGGATTTAATTTTTGGTTGGAATACAAAAACTT TGGGTAAAAGTTtcggtcggggataaaaaaagtcgggtaaaagttttggt cgggtgataacatatcggggaaaaaattcgtccggggaaatttcgtcacc cctttaaattttcgtcactttccacTAACATTTTTTTCCCGATAAGGTAG CAAATCGGACCCTTTTCCCATCTAGTTATTTCTTTTACCTGGTTATTAAT GGTAATCGCCAGGCTGGAAATATTTTTATAGATTTATGTCAGAAAATTTT ACGTCCAGAAAATTTCTCGAATCAGGCAATTCGTGGAATTGTGCATGTTT TGATAGCCCTTAATTTTGCGAATCATAAAGATTAAATTATTTCGCAGGAA TTAATCTTTGCGAAATTGCATTTTCAAGGACAAAAATGCTgcaaaaatag gctaaaatcctTTTTTTCATAATCATTTTATatagaaaatacaaagaaaa ataaaaagctggtttttcatgggaattaattttcgcaaatcagccaaaaa agttttttcgtgACCATTAATTTCGTGAATTGAGGAGTCATTCACGAAAT TCGCGACATTTTTTGCTCGTGAAATTTTCTGACATTAAAGTACCAAAAGA TATCAATAGAGAGAATTTAAATGTATTCGCTTATTTAGGAGCATTAGCTC GATAGCTCTCATTAGTTCTGTCATGTACTTGCACTATTTTGAGAATCTCG GCACTTTTGTGCAGCTCCAAACccactgttgtgacaaaattctcttcgaa aaagaagagaaaaatatcaaaatatccgTTTTCGGATATTTTCTTTGTGA TTCTAAAAACTGCTATTTATAGATATGTCAAATATATCCGAAAATGGATA TTTTAGCAATTACAAACTTTAGAAAACCGTAACTATACCGtaaatattat aatttttacATCACTACATGAAGAATTTCATGCTCATTCTTGtggtataa tttttattacaaacctAAATTTTTACGGAAGATATTCAGCAAAATAACTG CTTTTTGCgcgatttttcgattttaagatACTGTACATTTCGCGACATTA AAATTCCTACAAGATAGTGATGTGACAATTTGCCTTACCTAaggaaaaat ttccacgttGTAAATTTCAAGATGGCAAAATCTTCACCCCGGGATTTTCA TCTTTTACCATCTAGGAATTTGAATTATGATATGAATAATGTATACTTAT TCCctttatattaaaaaattattaaGAAGTTACCTTCctagattttcaaa aacaaaatttctagcCGTAAAATTCGTAGGTAGTAAAATTCATCATTCAC ACCAACTagagatttgatttttttcctgtgattaAGTGGTTTGTCCGATT TGTCATTTATAATGTCTAAGCaactttttatttaatttagaaaatgtaCG AAGATGGTGAGGGCGTTCTGTCAATCGATGAGTTTAGGAGAGCACTGAAG TCAGATCATTGTATGGCAGTCCGACGATGCATCACAAATTTGCATGAACG GTATGGGAATACACCAAAAAAATATTCTCCAAGCATGAATACCTTTACAA ATTGCAGGGACGCAATATTGCTAATTCTGGTTGTGCCAAACATCTCCAGA GCCGGTGCTGTTGCCAATATGACCCTTGAAGAATACAAGAAGGCAACAGT AACGGCTACtggaaaatcttcaattttggtCAAGAAGCACAAAACAGCGA AGGACTATGGGCCAGCTGAGGTATTGATTCGCCCCGAAAATAAAGTGCTC CTGGATACGTACGTCAATGTCATCCGTGCAAATGTGCCAGGCCAGAAAGA TCCAGCAGTATTCATCCACTGGACTGGGACACAGTTCGATGCTACTGGTG GAATTAGTATCCAACTTTAcagcattttgaaaaagtgtatTCCAGAAGTT TTTCAAGGAGACAAGAAAGCCAGTTGCACAATTATTCGAAAAAGCCTGGT GACTTTCTTTTATAAGGAATTTccagaaatgaaagaaaaactatCTAAAT TAATGAAGCATAAAGTAGAGACTGctgaaaaattttataataCTAATCGA ATGCGGGCTGAATGTGACCAGACATTCGACCTTGTTGAAAAGCATCTCTT CGGCGACTTCAACAACTATCTTTGCGAGGAGGAAAAACGGAAGGCTGGAG AATCACAATCACGCAAGCATGAAAACGAAACGGAAATAGCAACTGATGAC GATGATCCTGAGGATCCCGATTACATCGATGACTCTTTTTCCAGACCTAG ACCAATAGCGTTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041736TCONS_00041736Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00041736-proteinTCONS_00041736-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002994supercontigsc0002994:9904..15217 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.81 1.03 0.47 0.34 3.28 2.17 4.39 5.2 3.81 4.58 6.06 5.88 4.3 5.81 1.32 1.6 2.08 2.59 2.61 2.97 3.48 3.22 1.54 2.19 5.53 6.63 4.91 5.3 9.21 9.56