XLOC_025536 (gene) - C. hemisphaerica

Overview
NameXLOC_025536
Unique NameXLOC_025536
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002930:1310..4966+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025536 ID=XLOC_025536|Name=XLOC_025536|organism=Clytia hemisphaerica|type=gene|length=3657bp|location=Sequence derived from alignment at sc0002930:1310..4966+ (Clytia hemisphaerica)
CGCGTCAGTTCAGAACTCGACGGGTCGTGTTGCTAGTCGCCGGTTTAAAG
AACCGGTTTTTCGGATTTATCGGATTATAATTTCGGTAAATCTGGTCTGC
AGATTTCACAAATTTCACTGGATTCGTAAAAGACGCGCTAAAAATGAATC
ACATGGTTCTTCAGTTCCAAGCAGTTAACAGTGTTAATATAAAGGTCTAA
AAATGGATGAAATTAATTCCAGGATGAAAGAATTGGAGTACAGATTGACT
CCAAATTCAAATAACTTTCGGTAAGGatgtttttatactttttattcATT
TACAGGGGTAATCCTACTGTCGCTAGTGTTGTGTGTTGACCAACCTTTTA
CAGACCTTGTGTTTTATGGaaggaaattttcattttatctcTTGCAAATA
TAAAGGGGTCACTACCCCTCCCTTACCCTAGTTTCTGAAGCACAGGAGTT
GCGGGAGAAAAATGGAATTGCAGGATTGGTGTATTAGGAAATTCGAACTT
GACTTGTCTGCGAGTCTGCGAGTGCGATTATTTACGTGGTGGACCCCGTA
TaaagttgaagttggtttgatattctacgtttgacgtttgatattCGCTT
GATATttgtttgatattctcaaatttgattttaagtgTGGCGCTTACAAA
GGGAGGCGCTTAATAGAGGGCAGcacttattttgaattttagaaattCGT
TTTCCTGAGtttattccaaaaatttgtATCACGCTTGGGTTCCGAAGAGG
ATTTTTCTGCGGTTTTAACTATGTTTTAAGGCTATAATTATAAGTAGTTA
GCGATTGCATTTCCAATTGATTCACTTGTTTGTAGAGCTCTCCATNggtc
gtggcttcttcacaaagacgaaagacagatccggacttatttcgtacttt
ccagtctcttatTCGTAGTTtctctgactttctggttctttctgagttat
tttctatgttttctaacttactgaatgacttaccgacagatcgccaccgg
tgggattcaaacccactaaatgcaaagttctgatgttttgaaacccattg
ccttatccactgcgccacggattcatgccaggataCCGCTTCTGATGGCT
ATTTAAATactgtacaaactgcagaccagactgtattaagagaaaatcac
aaaaaagtgcttgtttcgagctccaaccctaaccctaactgataataatc
caattcctagccaatctgatacgtaaccacacccaaaccacacccgtACC
CAagcctaccaggtcgcctgcaggtcctgacactattcccgcataccgga
tccgaaaaataaatacatgtctttcgtctttacgaagaagccttcaccgt
aGAGCTCTCCATTGCAGTTTATCctttaaatttctttatttttccttcat
tttctAATTGGAGGGCGACACTAATAACAAAAGGGTGGTGTTTATATTGA
AATCCATATTTTAGTTGAGGCACTTAGGAAGGCGTTTATAGAGTCTGGCA
CTAAATAGAGGAAAGACGGTATCTGTTTGGAAATAGTACAAAATTTTGCT
AAATCGTGAATTTTGATTTTACCACTTAAAATTTATAAAGTTgtgaaaat
cgcaaaaattaagTCCCGCGAACAcaactttaaaaaattatttttgcgac
tgacaaaattagttcctttaaggtatttacCTGTAAATTATTAGAGCATC
CCACAGTATAGTATTAaagtaaagaaaagaaaaaagaaacttttgtaaCA
AATGAGATGAATTTGacattaattttctttcttagtACCAAGTTTCAACC
AAACGAGGGGGGACCACCCAAGAAGAAGTTTTACAAGCCAAAGGATACAT
GGACTGCAAACTTTTATTGTTTAGCAGAAATGGGTGCTACCCACACTCCT
TCCTCTGCCGAACACCAAACATTTACAGATGCTGGTCTTGGTAAAAAAAG
GATACAGCTGAATAACAAGGCTAGCCATTTAGATTTGGTGCTAATGTTAG
AGGAGGAATATCCAAAACTTGCAACCACCAATGGGCGCTTTATGCTGCAT
AGAGCAGAAGGTGGGGGCAGTGGTAAAAGGAGGCTAATCAGAATTGCAAC
TGGACCATGTGGATACTCTGTGCCTTATTTGAAAGATTCATGCAACATTG
GGCATGCAACGATCTATGTAGTACCAATTCAAGAATCTCTAGATATGACA
AAAATAGTCACAGTAAGTTTTAAGTTCTTTAACCAATCATCATGTGATTG
TCTATTAGTTGTACTCAAAAAGTTTTAGTTTCAAATATTGAGTTTTAGGA
GCTTTTTCTGCTATTGAAAAGGTTTTTGTTTACAAGTTGGAATAAGCAAG
AAGAAATGTCACTTTTCTTCCTAAGAATTGGCAAATGCTCATCGCTAATT
AATCTCAAGtacagttgagctagaatctggaGTGCCTAGTCTGTGTGTCC
GCCAAAAATTTCAATCAGGAGTATGTGCTGCCCGACTTTTGGCAGTCAAA
CACTTAGAGGGACCAAAAGGGGTtgaattttcatgaattttatgACCCTT
ATCAggacttttttctaaaaatttagcCTGTTGAGGGTCatttaattttt
acaaattttgaacatccaAAAAGTCACCATCAAGGGCGACACACAATACC
CGTACCCTCcgtttgcctaagtgcccccccccctgctgaAGTTTACGTTG
CGcccttcaaattattttaaagttaCTAAAGTTTTGAGCCCAATATGGTA
TGCATGTTCTACACTACCTTAAGGGGATTATTATTCGTggagaaaatatt
ttgcagaTTACTTGTAAGTTTTGGCCTTTTTTGGCTTGGGAAAGCCAAAC
TCGTGTCAAATTTTctcatgaaaattgaaaaactcctagtaaattgaagg
aaaatagtaaaaaaaaatcaaggttATATTGCGCAAGCTGTCTTGCAAAA
ATTAATACAAAAGGaatcaaattgattttaaaaaatgttttatttcagCG
TTCTTACTGCTCTCCTACTGTGGAATGTATCTTCTGTGGGGACTTTGTCG
AGCTTCTATTGTTACAGGAACATACCAAAATCTGCTCTAAGgtaactttt
ttaaacttttgaataaaGAGCTTTTTAATTTGATAATAAAAGTTACAGGG
GTTTCATTAAAACATGGTACCATAGGGTACCCTGATATGGTAGACCTTCT
GGTATACCCTGccctgaaaaaagtttggagtcaatgaaaaatatataaag
tcaCAATTAAATGGTGatggttttgtgcttgttgaaaaaataactttgac
tTGAGAAAtctcacttgaaaaaaggttaaaaatccCTTATTTAATTTCTC
AccaatagctcctgaaatatttcttttctcaaGTTATTCAACCTATGCCA
TTAAAACCTTTTCATCTTTGATCCACTGGGAGAGgataatttgacatttt
ttcccTTTAGGAAGTTTAATTTTCTTATGTCAAACTGTTTTCATTCATta
ttttatgttatttttcttattcgTTAGAACCCTGGAAATGAACAGAAGGA
GAATGGGCAGAATGATAAAGAGTGAGAGTTATGagattttatttgattta
gATAAAGTTAGATTCACTCTGTCTCTTGGATAAGCTTCTTTTATTTCTAC
TCTGCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041600TCONS_00041600Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00041600-proteinTCONS_00041600-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002930supercontigsc0002930:1310..4966 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.65	0.81	0.23	0.17	2.99	2.73	2.17	1.53	1.37	1.64	1.77	1.2	1.14	1.46	1.44	1.52	1.48	0.73	0.73	0.65	0.6	0.45	0.23	0.73	1.34	1.81	0.31	0.44	0.17	0.45