XLOC_025427 (gene) - C. hemisphaerica

Overview
NameXLOC_025427
Unique NameXLOC_025427
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002883:867..10311-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025427 ID=XLOC_025427|Name=XLOC_025427|organism=Clytia hemisphaerica|type=gene|length=9445bp|location=Sequence derived from alignment at sc0002883:867..10311- (Clytia hemisphaerica)
CATTTTGATTTCAATCGATTTTCACATTAGAATGCACTGAATGACAAGCC
AAACACACCAATGGGATCAAAAGCCAATCATTTTCCAATGCCAAAGACCG
AAGTTCAGGTAAGAACACTCGCAATCACAGTGTTGTAATCATCACACGTG
CTACTCACAGGAATGGCGTTTCATTTCTCCTTGCAATAACTCTAATAATC
GCTGAGCACTAATCAGAGAGAATGCAACCAGGAATTGAACTCACAACCAT
ACGAACTTATTGCATCAAAGTCGTGCTAATTTTTTGGGAAATTTTTCAAA
GTCCTCTAATTTTTTCCAGACATTGATGCAATATGTTTGAGTAGCTCAAA
TCCAAAACATGTCTCCAATTTTTAGGCCTCCGTTAGATTTTCATGATTAT
GAGCTTTCTTAAGGTCCATTGTACCAAATCGGTGTCCAGTATGTGACAAA
TCTCCATTTTTGCTTTGCTAGAACATGTATAAAATGACTTCAAAGTAAGA
AAAGAACATCTAGGGTGAGTGAGAAACAAGCTTTAGTACTATGAAAATCA
CTAATAAAAAAGTTACATTTTTTTTTGTTACGTACGCAGACGTACGGGAC
ACATATTGCAAAGTAACCTTGTAAAATCAACTAAAGCTTTGAAATCATTT
TTCCTTGGTACAAACACTTTGATTATAAAGAACCGCAAAATGTAGAAGGA
GTGAGTGGCCAGTATATCAACAGGGTATTTTTTTGAGACACCAAAATACG
GGTGTCATGTACGAGGCAATTTTGCACACGAAAACCAAATCAGTGACAAA
CATGATGCTGTAGCTTTTTAATGACCTTTAGATTTCTTAAATTCAACCAT
AACATATGAGTGTGTCATTAAGGACTGATTTCACATCAATATATTGTTTA
CATCCGGAGCTATAACATGGAGAGTGAATATTGTCACGTGGGTGAATTGC
AGAAAAATCATACAATGTCCTGTCCGCAACAAAAGCACCATTTACGCTTA
AGTCAAGATCTCGGAACTAGAGAACCCCTTTGTTTGTTTTGTTGTGACAT
ACTAAATGGTTTTTTCCGTTAAAGACGTTTATTGCCTTCAAATAATCTAT
TCTGAATTTTTTAACTGGTAAAAAATAATACGGTCCAAAAATTTGTCCGG
TCTGCAACGGCACCAAAGTCTTAATTTCTCAATTTTTGAGACATCTTTAA
TGCTCTAACTGTATCAAGTCAATAAACTCTAGGAAACTACAGGCTTTTTG
CAGCAGTATTCTTTTTCTTGACTTTACATGTACTGGCTATGAGTGAATAA
CTTTTTGTCCTGTCCGAAATAAAGTGTCCTGTCCGCAACAAAGTGTCCTG
TCCGCAACAAAGTGTCCTGTCCGCAACAAAGTGTCCTGTCCGCAATAAAG
TGTCCTGTCCGCAACAAAGTGTCCTGTCCGCAATAAAGTGTCCTGTCAGC
AATAAAGTGTCCTTTCCGCAATAAAGTGTCTTGTCCGCAACAAAGTGTCC
GCAACATTTTTCTCAAGATTGGGGCTGTAACAAATAAATTCTATAACACT
CCAAGGAAGGCTATTTAACAAAGTTCACAAAAATGTAGAGTTCTTAGAAA
TTGCATTTGCCAAAGTTATGGGTCCTCAAAAAGTGCCTGTTGCGGACGGG
ATATTGTATGAATTTTCTGCAATTCACTCACGTGCGGGACAAAAAAAAAA
CCTTTACCATGCATATAATACGAGACAGTGAAATATCAGTCTCCTTGTTT
TAGATGAATGTTGCCAAAGAAAGTCTTAAAACATGTCATACTAACGCAAA
ACCATCGACAAATATTTCCCGTATGCGCCACAATAGCCAGTTTATGTATT
TGCACTTTTGAGGACGGTAAAATGACTGAAGCGATTTGGAAAAACCTGCA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNACAACCCTTCCCTCTCCCCCCATCAACAAT
CAATGATGAATTTATTGTGTTGTGTATTTTCGCTAAGCGCTATATTTTCT
GACTGATTTTTTTTCATTTTTCATTTCGCATTGCTATCTAACTTTCATCA
TCAGGTAGGTCCATTCAGCATGTTGCTTGTTATTTTTAACCTTTCGTCTA
CCGCAAGAAAGAGACAACACTTTTTCTTTCTGGCATAGTGATCCTTAGTT
GGTTTTGATTTGAATTTAATTTGAATCTGATATATCTTGTGTTCCTGTCT
TTGAGTCCCTCCAAAACACTTTGGGACTTTGATACTTCAAAAAATGGTCG
CATATGGTTGAAATTCTTTACATAATGTTGATATTAGTAAGTTTTTGAGT
ATTGTCTTTGTTTTTCAAGTTAGAAAAATATTGAAGTCGAGTGTTGCCCA
GTGTTGTTGACATTTCCCACATGTATGGTATGGTATAAAAAGATAAGCTT
TTGCTTTTGAGAACTTTGTTTATTTATTTATTTTGGAAGCGAGCAGAAAG
TAGAGGAGGTTTTAGTAAACCATAGATTGTCAAGTCACGATAGTCAATAC
AGTTTTTTGTGTTTTTGGTTGTCTTCAAAGAAATGGTGGAGGAAACAGAA
CTAACTTGGCAGGAGTATTGGGATGACGAGACACCACCATGGCAATTAAA
AAAACCGAATCCCGACCTGGAAAAATATTTTTCCGATTTTTTGAACAATG
GGGAAATAACTGATGGGAGACGTGTTTTTATACCTTTATGCGGGAGAAAC
CTAGACATGAAATGGATCTATGATCAAGGTCTTACAGTTGTTGGAGTAGA
CGCCATCGAGAAACCGATTCGGGAATTTTTCGGAGAGCACGGTATCCCAG
TTAATGTTCAAGAATTAGAATCGGGTTACAAAGTTTTCACTTCGCCAGAT
AAGAGACTTACTTTAATTGTGGGTGATTTATTTGGGCTTGATGAAAATTT
AGTCGGCGGGAGATTTGATTATTTTTATGACCGTGCAAGCTTGGTAGCTT
TAGACAGTGATACACGACCGAACTATGTTGGGCTCTTATACCGATTCTTG
AAGCCCGGGGCGGTTGGTATGTTGGAGTCAGTTGAGTATGATACGAAATG
GAATACGTCTCATCCATACCCGTTGTTTGCGAAAGATTTAGAGGATTTGT
ATGGCGATCAATTTTCGTTCGAGGAATTGAGCAGAGGCAATGATGTATCT
TCGTCTTATCCAAGAATTAAAGTAGCTTATAAAGTCTGTAGAAATATAAA
ATAGAAACATTTTAATTGTATGAGGTTTTAAAATCCGTAGGTAACATGTG
AAGCTCTTATGGATATTGTTATACCAAAACAATGCAGAATTTGAATAAAA
TACGTTTCCAACCTAAATCATTTCCATGTCTCGAATCTTTTCTATCTTTT
CTCGAAATTTTGCGTTTTTGAGGTGATAATGGGTGCCATTTTTGGTTTTT
CAATTACCGATCTTTCGATAGGGGTGTCTGAAAAATCCTTCTTGGTGCCC
CTTATTTTTAGCGCCCCTTCTCAAAAGGACCGCTGGCGGGGCCTGGCCCT
CTGCCACCACGCTACTATGCACAACGTTGTTTTAATTTATTTCATGTTCG
AGGGCATAGAATTGACTTCTTTTCAAAATGTGGAGGAATGCAACCACTTT
CAAAATTAAAAAAAGAAGGAATGAAATAAAGTTATAAATCGCTGTCTTCA
AAATAAAAACTCAACATCAATGTCTGAGAGAGCTGTAAACGATCAGACCA
TTTTCAAAGTGGAATCATTGTTCTTTCATCATCTACCCTTTGCCCTTTCC
AAACGAGCTTTCTTAAATTGACCATTTAAAAGAAAATTACATTTATTTTA
TGCTTAACTTGGACTTACTTTTTTGTAGTTTTGGCACAAACATTTGTCAA
CGATTCAGTCGATCAACGAGCAGTTATGTTCACCACAGATTGTCAGTGTG
TTGACCACACTCGAAGATCGAAACAGCACTTACGCACACTCCTTCCATAA
CATCAAACGTGATCTTGCAAAGGTAGGTTTTTTCGTTGTGTCTCTTTACT
TGTTCGTTTTTCCAATTGTTTATTTCTCACTTCATTTATCCTGAATGCTT
TTCGACCGTTAAATTAAAAAAACCAAAACGATTCGAATCGATTCTTAAGA
ATATCTAATATTGTATTTATTAGTGGTTTCTTTGTTTTCAAAGTGAAATT
TTTTCCCAAATCTTTCGGTTGGCCATTCATTTTAACCCGGTGTTTATATT
TTTTTAAACATGCGAACCTTGCGTCTCTTTGGAAATAGGCTTCTTTTGAG
CCATGCCTAAAGATAACAATGCTCGTAAACTCTAACAACTTGTATTATAT
TAATCAAATAAGTTTTGCTCTTGTTCACTACACTGAAGGGAAAAAACTTT
ATCGGACAAATTTCTTCGTCGGGGAAAACGTCGTCAATTTTGTGAAAATC
CTTGTCACCATCACTTGAAGTTGACAGGAAAGATTTTATTTCTCATCTTG
AAAACTTGGTCACTTGCCTAAAAATTTTTTTCACTTCATGTACAGGCTGA
GCACGAGACGATGACAATCGTTCGATTCCTTGGAACGTTGGAACCTTACT
TCACTTTAATTGAGAACGGATACAAACTACATGAATTGATTCAAGTCTTT
TCACCTATGATGCACACATTATTATTGATGTGGACATACTCAAAGTAAAT
TTTAGCTATGATTATTTTATATTCTCATCGTTTTTTATCGTTTTTATTTA
AAATCGAGAGGAGGAAAGGACGTTTTGGGGCCATCAAAAAGACCTTTTTG
AACAAATTTTATGTAATCGTGATTTGTAATTTTAGAGAACCCTTTCAGAA
AGTAACTAAAATATTTTTGGGGTGTTAAAAGGTAAACTCCCGGCTCGTAC
ATTTACACCCGATCCAGGATTTAGGGAGTAACACTTCGAGCCTACTATAG
TTTGTTTCGTAATCTATACGAGTAATCTGTCCGTCCGTTTTTCATCCATC
TACTATTAATTATTTTGGGCTATTGTTGCACATTTTAGCTAAGTAGATCA
TACAAACTATCACCCGAAAATGTTATTATAACTGTTTCAGATATTATCAT
GGTCCTGATCAAATCAATCGTTTATTACAAATGATCGCAAATCTGGTGGT
TTTCAAAGCAAGAGAAATAGTTGGCGAAGCATTCATTGATGACCCAGAGG
TAAAAAAGAAAAACAAATCCAACTGTTAGCTTCTTTTTATACAAGAGTAA
ATCTTTGTTAAGTTCTCATAAAAATGTTTCCCAAAGATTGCAATCCGCCA
TATTGGTCACATATTGGCTACTTTGGCAATTTATTGGAAGAGCTCTCAAC
ATAATAACGCATGACACGTTTTTGATCAGTGCAGTTTGATGGCCCTTTAT
GGTGATTTATGATTCCTTACGGCTTCTAAATGTAAATTTTTATTTATCTT
TCAGAGTCAAGGATTTCTCCGTCAAAGTTTGAAGATTTGTGCAGCATTTC
GTGGTACTTACTTGGACACCAAAGATAAAGCTGATGAAATCAACACATTC
AAAGTAGAAGAACAAGCTGAACTGAAGTAAGTGCCAAGGATACACCTATA
TGATATGCTGAATATATTTGTTTTTGTCCCCAGTCTTAATGCCAGAAAAT
TTCTAAAGCGATACTGTAAAGGCTCAGACAGATTTGGGAATAGCAATGGC
AGTGCAGGCGCTGCGAAAGGAGTGTTATTCGAGAGTTTGTATATCTTTCT
ACCCTTTGAGGATGGGTAATACATACTTTTTTCTTACAAACCATATCTCC
TGTCCTGATTGTATTTATTGGCGAGACAAATTTCATTGCTATTCACGTAA
TGTATCGTTTTCTTAACAATCTAATTCTTTTTCAGTGAGGAACAGGTCGG
AGTGACGTGGCATAGTTCAGTGTATAAGAACGCGCGCACGCAAAGAGGCG
CCGGCCTGTTTAACAAAACACGTAACGAACATGAATACGAAGAGAATTTC
TGGGAAGATTCACCGTGGCCTGCGCGAAACAGTCCTGTCTTTGACGTTTT
AAACAAGTACATGGAACGTTGCAATGATGTCTTAGAATTGGTTGAAGTGT
CACAACAATTCAAGAAAATCAAATTCGCATCAAACCTTGACGGTGCTGGT
GAGCCTAGCTTGAATTCACAGATTGTTGATATTGTTAATGATTTTGATGA
CGCACTGGCTCAGTTCAATTGCTCGGTAAAAGTAAGTACATTTTCTATTT
CTTGATTGTTGTTATAGTCAATAACATTGTCTTTGTGTAAATGAAATTAC
CGTGTTTAAATTTTTGTTTGCCTTTAGAACATTTTGTGGCTGTTAGACGT
GGACTAGTTTTTCGTAATACGTATAAAACATTGTGGTATATACAACTAGC
CGTCAAGGCGTCGTCTGAGATGGGCTATAATGAAAAAGAATTGCCGTCTT
CTCAAAAATCGCTAGCGAAAAAGCTTCAAGGGGGGATTGGAAAGTTCCGA
TTTAAGCGTTTTGTAAAATAGTTACAATTACAATAATCTCTATTAAAATA
ATAATGCTATATCTTTTTAATTTACTCGTCATTGTCTAACATCTCCAGCT
TTTATGACCTGATAATTTTGTTCGTTTAGAATGTATTGGATCTGGACAAA
GGCCTTCCCTTCGAATCTGCTTTCTTTAATTTTCATTCTAAAGTTCGGGT
AAGTGATAGTCTGTCGAATTTTTTAAGTCCAGAATCCTGGTATGATATTT
ATGTATGTTTCTTTGGCTCACTTCGAATCTTTCTGTGGGGAAGTAGTAAG
TCTATCCCTTTTTTCCATTTGCGCTAGACCTGAGAGATCGAATGATGAGG
TGGAGCGCCACACATACTCTCAGCTCCCTGTAACTTGCCGCCTAGATTAG
ATTACCCAATCTAAGCTATTCATTCGCTGAGTTGGCGAAGACCAGGGATC
GAACCCACAACCCTTGGATTGTAATGCGAATGCTCTATCGACTGAGCTAC
CCGGGACCTCTGTCGAGACCTCTCTAAAGTCGAGTGTATTTAACTATGCA
CTATTTTTTAATTCCATGTGAAAATCATGTCAGCGCGATCAGATTAATTC
CCTCGAGAGCGGCTTCCATACGGTAGTAAAAAAGACTGCACACTTGAAGC
GAATGGAATAAAACAGCTGTTATGGCCAGAATACTTAGATTTTATTTGGC
TCACCTCGAATTTTTCTGTTAGGATTAGTTTTCTTTATCCACATTCATCA
AATCAGAATTGACTCGACTATTTCTTCAGGACTTGGAATCACAGTTCGGC
ATGCTTGTAGCAGGTAGTTTGAAAGAAGGTTGGGATATCAAGGCCAAATT
ACGTCTTTTGGATGTCTTTGAAGGGATTACCACACGAGATTTGATTCAGG
TTTGTATCAAAGTTTAATTATTTGTTTTTACGAAAATAGAAATGAATATG
CCTTCTGATCAGATTTATATGATAAATTTTTTCGAGCTTTAGATGTTAAT
AACCTGGGCCGATCCTTTTTGATTCAAAATTTCATTTGCCATATAAATAT
CAAGGGGGGTTCCTTGTTTTACGAGAAAGAAATGTTTTTCTTTTTTCTAT
AAGGGAATTTTCCCATTTTGTTGACCACGAGTGCATAGCTAGAGTGAATG
TTTAGATTCGCGATGAAAACACAGACCTAAAAAACCCCTTCTGCTTTAGA
ATGTCAACCTTAGTCCGAGTTAAAAAGGTCGGTGAAACCTTCAACTTCAA
CAGAACCTACCCTGTAATGTTATTGAATCGATTCCCAAAAATTATAAAGC
TAGGTAGCTCATAACGGAGCTAAATAAAGGAAACATAATTCATTTTTCTT
GCCCCTCCTACCGCGCCCTCGAACCAATATTTGATATCCTTTGGCTTTCG
AGCTCAAAATGATTGAAAGACCGTTACAATTGTTTTTTACATGAACCTTT
TTAACGTATTAGTTTATTCCGTTCCTTGGAATGAATCTTAAAATCCAATA
TTTTAATTTTGTAGACGGTGTTACACGATATTTTGTCAACGTTTATTGAG
CACGTGGAGAAAGAGTTACAAAGCACAAAACAATTGTTCGATCAAAAGAT
GAACAAGAAAACAAGCCATCAACATCTCTCTCCTGTCACCAATCAAATAC
TTTGGTTGCGCTCGTTGAGTGGCCGAATAGAGGTAGTGTGTTTTTTAGAA
TAAAGTCGACTCTCTCTAATTCGATACTCATGGGACCAATATTGACGGCG
ATCAGGGATCAGGGTTCCAAGTTTTATGTATTTTGCAAGGTGAATGCTCC
ATAAATAATACTTTATAATTAAAGATTATATCGCATTAGACAAATTAACA
CTGATACTTATTTTCTTTCCGACTTGCAGGAATTGTACTATAAGATGACG
AAAGTGGCACCAATGTGTTTTGACGGCGAACGTGGATGGAGAGCTAAAGA
TTTGTATAAGGATTTGTGCAGGAAAATCAAATTGTATGTACACTTGGGTC
TTCGCGCTTTCAAACTCGAGCGAGATATCTAGTGATGTTCTAATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041456TCONS_00041456Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00041456-proteinTCONS_00041456-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002883supercontigsc0002883:867..10311 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.08	0.62	1.51	1.26	29.54	21.8	5.98	6.3	2.26	3.01	1.95	3.1	0.52	0.19	0.13	0.39	0.21	0.08	0.09	0.06	0.35	0.11	0.6	0.4	9.37	8.57	0.46	0.39	0.15	0.09