XLOC_025093 (gene) - C. hemisphaerica

Overview
NameXLOC_025093
Unique NameXLOC_025093
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002693:7267..10846+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025093 ID=XLOC_025093|Name=XLOC_025093|organism=Clytia hemisphaerica|type=gene|length=3580bp|location=Sequence derived from alignment at sc0002693:7267..10846+ (Clytia hemisphaerica)
aattaCCTGATACTAAAGCGTTGAATTTTTTGATGCAAACTACGCGTGTA
CGCTTGCTGTCTGAGCGAAAACGGCGGCCTTTGTCAAAAAAGTTACATCA
GCGGGttgaaacaaaatggctgcagtttgtttacatattttttaaaggga
caaatttttcaaaataatcaaaacaaaagctaAGCTGCTTTAAGAGAGAA
TTATCATGGGTGTCTTAAATTTTCCAGGTTCTTTAAGCTGTCAAGGTGGA
GCTGAATNCTTTAAGAGAGAATTATCATGGGTGTCTTAAATTTTCCAGGT
TCTTTAAGCTGTCAAGGTGGAGCTGAATTCGATATAATGTAAGTTGATTG
CCCATTTTAATGTTTGAGGGttgaattcttcaaattttacaACCCTAGCT
AGCCAGTTTATAGCCACACTCTatctaggaaatctagctttcagaaaaaa
acaacatcagtcatctacaggatgtatttgcacaacaaggatgagagtta
cctgaatcaagttcgcaagacaattaattaNGCCAGTTTATAGCCACAct
ctaggaaatctagctttcagaaaaaaacaacatcagtcatctacatgatg
tatttgcacaacaaggatgagagtgacctgaatcaagttcgcaagacaat
taattaaaacttgaaagtttgaaacaaaataaaacgtgcagcagccaaaa
tcaaccaaccaaaatttgtcattcaattcccaagaaGATAgcacttcgat
ttttaaggccttgtttatacgctaaagtaaaaataataccgcacatgtaa
atgggtcattgtttcatgaaaaataacccagcgctttttaatgaaattaa
cattttcaaaaactatgagaaattgcctaaaatttgagccatatatgaaa
aaatttgtattacaaaagaaaaaaagaaaaaaagtgtattacaccaaagt
cccaacttctctagatcaaaatttattggcctatttgtggtaaaaaactg
atggaaaacagggaatttccccacaatctGCATTAATTTATGCAAAATTt
aaaacacctttttgaccacaaataggcccataacttttgatctagagaag
ttgggactttggttttatacacttttttgctcagtttgaagagctctatc
atgtgatataaggtcattttttaatttgaagaccctccaaaaataatgaa
tttccaggccttgcaattttgcctgggaacgcaaaaaatcgccatttact
cgttacttgcacgataatatcgtggaaactttttgaNAAGGTGAGAAAAC
CATGACCAGACAAGTCTGTGAATTGGggtatatgcatgttagcctccact
gatgcaagttaccctttttcacggtagcacttcgatttttaaggccttgt
ttatacgctaaagtaaaaataataccgcacatgtaaatgggtcattgttt
catgaaaaaataacccagcctttttaatgaaattaacattttcaaaaact
atgagaaattgcctaaaatttgagccatagatgaaaaaatttgtattaca
aaagaaaaaaagaaaaaaagtgtattacaccaaagtcccaacttctctag
atcaaaatttattggcctatttgtggtaaaaaactgatggaaaacaggga
atttccccacaatctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNacaatctgcattaatttatgcaaaattaaacacctttttgacc
acaaataggcccataacttttgatctagagaagttgggactttggtttta
tacacttttttgctcagtttgaagagctctatcatgtgatataaggtctt
tttttaatttgaagaccctccaaaaatatactaattcgagagtttccatc
gaaaaaagtggaatctaagaggtgtatcacgaaaatcattttctagccac
tttttttcgacctcagcagcGCGACTAAAACAAACACTGAATGCTCATTG
AAGAATTAGTTTTATAATTTGTAATGTCAATATTGACAACCGCTGACAAA
GTTTCAAAGCctttaaaaaaaacacttttggtGGAATGTATTCAAAATGA
AGCTACACTGAATTGATTAGTTGGTCCAAGGGGGTTTGTAAGAaggttaa
ttttcaaaatatcaattaGCATCAGGGACACATATTATAGGCACTTGAGA
GTACGTTTTCTGTTTATTTTCAGATCCTTAGAGGCAGATATTGATCTACA
ACACGAAATTAATGATCAAGCTCTTCAAAATATCAATTTGTCATTGCATT
CAACTGAAGAAAACAGCAGGAGTCCAAAAAGAAAGAAGTTGCGTTCTAAT
GGAGGAAGAAAATCGTATGATTTTAGAGAATATGGTGTTGATGCTCGAAG
AAGAGGTGCAAAACATCAAAGACGAAAGCAAAATTGTATGAGTATATttg
cttttaattttttagacAACATTATTTTGCTGCAACATCCAAGAGAACTA
ATTAGAGTTCAAAACTGACAAAGCTACACCTAAATTTAGTCAATTAATTT
CTCACATTTTTCTTAGCTGGCAGTTAATTAATGTTGGAGCCATAGGACGT
CTAACTGATGTAACTGTAACTGTTGTCTTTTAGTGGCTGATTTGATGGAC
ATCGGACGAGATGAAAAGATGGATGTTGATGAAAGTGAATGGTTTTCTGA
TGTGCATCTCACACTTTTCACTGAGCTCTTTTTAGATGACAACAAAATGA
AGGTATATATCTGCGTAGTGAAAAATATCTCTTAAATTACAAAATTTACC
TTTACGACATGACCCAAGgtgtaaaaaagtaaaaaacttcaaCTTTTTTC
TTGTCAAACAGGCCTTCTAAATTCACGTTTCTGCAAATTAAACTCTGCAA
TATTACTCTTAcaacttttgatgaaaaaaaaaatgtaacaaaGAAATGTg
acaagaaaactttttttgctcGATTATATTCTAAAGGCATGGGACCGTTT
TATGCAAATGAGTGAAGAAAAACAGAGGGACTATCTGGAGCGCAAGACCG
GTTCAAGAAAAATACCACAAGATGAAGTGAAGAAAGAGGAGACGCCATCT
GATGAACAAGGTCCAATCAAGCCTTTCAAAGAGGGAAGCTTCCAATTGAT
TGATAAGAAGATTCAAGATATGTTGCGCACAAAGAAACTTGCAGCCTTGG
TATATTTTAGTGTTCATGTCTGCTTTCAAACTATTTTGCCCCTCTTTgcc
atacacccctgtgtcacagacccacttgaACCCAGCCACATTGGaaaata
tggcaaaaatttcgtccccggtgggaaagtACCCTAGGCTTTTAGCccaa
ctgggaaattgactttgatttcatccccactcgaaactctatgttttaaa
attgcatttggacctacctggaggtcctataaattaccTTCGttaatcag
gtaggtccattcagcttctactttaatggg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00041075TCONS_00041075Clytia hemisphaericatranscript
TCONS_00041076TCONS_00041076Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00041075-proteinTCONS_00041075-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002693supercontigsc0002693:7267..10846 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.57	17.08	4.58	2.98	32.38	25.43	45.16	53.5	32.18	34.25	23.6	25.18	22.23	23.94	24.61	30.14	33.99	32.86	23.51	28.72	32.26	32.24	42.66	36.62	37.51	38.75	44.03	34.03	44.03	49.69