XLOC_025016 (gene) - C. hemisphaerica

Overview
NameXLOC_025016
Unique NameXLOC_025016
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002647:1..5852+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025016 ID=XLOC_025016|Name=XLOC_025016|organism=Clytia hemisphaerica|type=gene|length=5852bp|location=Sequence derived from alignment at sc0002647:1..5852+ (Clytia hemisphaerica)
CTTGTGCTATCTACCAACACAGTTGCCACGTTGATGGCAACTGTAAATTA TATCGCTATAAACGGGCCAAGtaaatttcctttttgttattttttaattc TATTTTCTGATTCTGACATTAAGCAAATCAATAGTTGTTAGTATTTTCAT ACGATTGATGAAGCctacaacaaaaaaaattacagaGATCTTAGGAGATT CAACAAGTATtgcaaaaccgcaaaaattagaaCCCGCGAAATACATTTTT TAccaatttaacaaaaaatttgaagaattcctaggaaaatgaaagaaact tgTCCAAAAAAGGAGCAAAACCGGTAAAATTATTCCTGCGAAATTAGTTC ATTTAAGGTAATGTTCAGTAATCTTCGTGTATTTTCACAtaactttaaat ttttcatttaagagTCCAGAGAGCTTTATCGGCCACTTTCAAATTATGGT TTTCAAGAAATGGATCTCTCTTGTcaggacatttttttgaaaattcccat TTCGCTCTTGATGAGGATAGCTtcttttctatttatttcagGAGGAAGCG TAGTACATTTTATGAAGACCAATTTATTTACAGAAACCCCGTTGTTGCAT CCTTTATTGATGACTTATATGGCACCAAAAAACGTACAGTAGGTTGTTCG TTTGATAAAACGATAAATCTTTCTTAATTTACTCGACATACTCCTCCCTT GCttaataattttttggaaaatatttttgaaagtttcttctttttccctA GTTTTAGGTTAGCCTGCTTttcgattttattttattcagacccccTCTAA TTGGTACCCGAGACCGAGAGTAATCACGTTTGGGTGTTATGTTTTCATTA TTGTGTGAATTCTAATTCAGTGCTTTGTATTCTGAAAGTCTTTAAATATT TCCACTCTAGAGCTGCGAAGATTCTCAGTGTGGAGGGGTATGGACAGCAG CCAAGAATTCCAAGCGAAAGCTCGACAAATTGGACGAAACAGGACTTGAT GTTGTAACTTGCAGACATGTAATTGCACAGAAAGCTCTGAACATGTTTCA AGGGGAACTATTTGGCTACCCAATGTTCCTGCTAACAAATTTTATGGTGC AACGCAACATTACCTATTGTTTCGCTGACGTCATGTGCAAGTTGTGGCCA TTCGTAGTGCGAAACGAACCGTTCTTGCAAGATAAGATTAAGCCTGCACT ATCCGTGATGCATGCAAAAGGTCACGCTCTTGAATGTCAAGTATGTTCTT CCgatgttttttgatttttgagactGAATTTAGTTCCCTGAAAGAATTTT AGATTACCAAAAATCTATTGAATTAAGGCAGATTTTTAAGGCTTATGGTC CTACaatctcccaaaaaaaattaggaaagatTATCTTGAATAAAACTTGA CAAGCTGTTTTGGATCACGTGATATATTCTATCCGTTAAAAATCACCACT AGTTAACACGAGTTTTAATAATTCAGCACTTTGAACTAATGCTTTTAGGT TATTTGGAGTGGTGAGTGGATAGATGGAACAGCTCGATCGACAGGCGAGG AAACGGAACAGCTCTTCAGCTACTTGTCTCGTACTGGCAATACAACGAAG CATCAATCTCCAGAAAGTAAAACGTCAAATTTAAAATTTAAAACGTCTCT TATATATTTTTTAAAAAACAGAAATGGTATCTAGTACATGAAAACCAAAT TTTAAATTTTACATAGTCTTCAAATCGTATTCGCTCTGATCACAAATCTG ATCACACATTTTAGATCGAGAAGAAACATTGACTGAATTGGCCTTCCACT GGAATAAAATAAAGATAACCCGGATCGTTTTTGATCTGAAGAAAAGATAT ATAAAGGTTATTATCAGTTGCCGTCTCACGTCTCATATTGTTTTCGCGCG TAAATAAGGAACATGgagtaatttttttcatgaagtCTAATATCTTTGCT TATCTAGCATTAATGTTCTATTTGGACGCGGTTTCTCTGATTTATCTTAG CCTGAAAGACAACCCCCAAACAACTGTAGATTTCTAGTTTCAAGAAAAGG TGGCGTCTGTACTATTTCTTTTGCTGTCAGAAAGCGAGTCATAGATCTAT TAACAATCACCTAAAGTTGTTCATCAAGATTTTTCTTATACGGATCAATA TTCGCGAATCAAGTACTAGTTCGAAAGTTCTGGGAACTAACTATTCACCA AATAGTCCATGCGAAAAGTTATACTCAAAGTACACGCATTTTCTCTCCTC CCTTCCATTTTTAGAACGAGAAAATGATATCACTAGTTTCAAGCTCCAAA CAAatagaagatgaagaagaaatcAAACAATGGAGGCTGGACATACAACA GCAAGCATTGGGTAATCTCGGTTTTTTAAATTAACCTTCAAGTCATCAAA CTGTCTTATTTTGCAAATGGTAAAGTTGCTTAAGTTATGGTAAAGAAAAA GTAAAAATAGGATCTGCGAGAAAATATGCGAtatattgttgtttttattg gtaACGAAAACAATCTAACTTGCTAAACGCAGGTAATCGTGAAACGAGAC ACTCCGGTATCAGTACCTTCAAAGATATCCaaaaaatcgatttgtgacgT GATTTTCTTCACGTTTTTAACTCATATCTTTGTTATATTTAGGGTATAAA CCAGCCAATGTTAGAAGTCTTCTTCCAATGGAAAAGGTATTACTACTCCA TGAAAACCTCCGCCTTCCATCCCATTTCGAGACAATCGATGCCTTATTTT TCCCGAAGACTATTCCGAAGGGAAAGTATTACCGCCTACTCGAGTTTGAT AAGAAAGATCAAAAGGAAGAATTGGCTCGCATCCAGGAAGAAACAACTTC TTCAGCATTAAAGGTTAGAATTTCATCTGAATTCGTGGAAAATATAAGAG AAATTTGACGGCGTTACTTTTCAAATCCACCGATTTATAATATAACAAAG AAATGCatagcatgtttcaatttataCTTCCATTGTTTTAGGCTGCTCAT AAATCCTTGTGTTCTGATGTCTGGCTGCCAATTATTCAGAAATCAATTGA ACATTCATTTACTACTAAAGTCGTTCTTGGTTCTCGCGTGAAAAGTGCAG GTaattctttttataattttccttttttcattacCGTATTCCTCTCTTGT TTTTACTATTCTCTTTTCGTGCTCAGTTTAGTTGTCGGCTAGTTTAGGTC AGTTAAAGTTCTAGATTTTGTTTTATTTTTTATCATAGTTTCTTGGattc ttaataaaaaaaataacattgatcCTATTGATCCTTTCCTGGTTTCTTCA GTTTAGTTTATCAAACATTGATCATGAAGTTGctttaatattttgtttta ttttttagatacTAGTAAGAAACGCCGACTCGCACAAGGAAAGGTTGCCA AAGTCAATAAAGAgcaattcaaatattttgaggACTATTTTGGAGTTTCG GGTACTCGTTCGTCTCCTCTCCAGATTCGAAATCTGATTGATGGTAATTT CCCTTGGAAAAGCTTCATCACGGAATCTCTGGGTAAGTTAAAGCATTCTC TAACCCGAAAATTTTAGGTAGTGTTGTAAAAAGGTCGGTGTAAAATGTGC CAACCCAAATAGTAGAAAGGAagtgaaaaaatttaatttgtatGCGTGTG TGTGCTTCTAATGCCTATACGGAACATGAAATTTGATATGATTGATGATT GAATGCTAATTTTTATCTATCAGTATGTACTTTAATTTCAACAGCTGTTG ATCGACACAGTCAAGTGGAACAGTGGCAGAAAAAGCAGCATGGCCTCGAA GAAAGGACCTTACTCGTTATGGAAATGAGAAACACCCTACAATTCTTTCA CGATAAAATGACTAAGCTTATGGCAGATAGCAAATCAATCGGTAATATNC GGTAATATTTCCTGGGgacatagtttctagaggggtcaagatcCCCTTTA CGTAGGACCCCTTGTAAGTGCCAAACTCCTCTTACGAAAGAGAAAAAAGA TTGGAGACTCCCCTTTACCAAATTTGCTGGCTTGGTGCAACAACAATTTG AACTCTTATTGTTACATTGCAAACAATTAAGTTTGGAATACTATAATAAG CAATATTTTTAAGTATGACTATGGAAACAGCAGCACCGCAGATAAAAAAC TATGCTGGATTTGTTCGCTTTATTGTAAACTTCATTCAAAATAAAAGTAG TTATATATGATGACAGGACAAACAACGGTCCTATGTTTGCCAATTACGCT TTTTAATTGAAATGTTCGTGCTTTAATGTTTTCGCTTTCATATTATCCTA TCCGTGATTTAAAATCGCCAGATAACCTATTCTTTCATGTTTCAGAAGCA NACAACGGTCCTATGTTTGCCAATTACGCTTTTTAATTGAAATGTTCGTG CTTTAATGTTTTCGCTTTCATATTATCCTATCCGTGATTTAAAATCGCCA GATAACCTATTCTTTCATGTTTCAGAAGCAGAGATCGTTGGCCTAATGGA AGGTGGGGAGGATTACAATGAGGTTGAGGTATTGtttgttacattattca ttTAGTCTTTGAAAATACGAAAATTCTGTTTTTGTGGGTTTTATTTccca aagaattttcaaaattcattataaGGATAtgacaaacttttctactttaA TTGATCTAACTAACTAGGTATAAAATAGGAGATCCTCGAggtaaaaaaaa tacttcataCAAGACAAGCTACCCAATTTGCTGAGAATAAAACTGTgcta atgatttttttttggNATAGGAGATCCTCGAggtaaaaaaaatacttcat aCAAGACAAGCTACCCAATTTGCTGAGAATAAAACTGTgctaatgatttt tttttggataatttgTGGTTTATTTAAACTTCCTTCTCTTTTGACTCAGG TACGTGCTAAAAAAGGCATGCTTTCTCTAAAGAAAGAAGGAATCGACTAT TATCGCGGATTTCTTGAAGATGgtcttgaaaagtttttgcCGATTATCGA TCCCAATGGCCTCGGACTTTATTCGGAGTTATTAAATTACGAAACTGATA GCGAAAAAGACGACGAGTACGACCATGATGAAGAAGTTTTGGATGGAATT CAAATGGAGGAATATTTTAGCGGAGAGGAGGACGATTACGAACAGTCTGA TGGCGAGAATGATGATGAGGAATAACTATTTTTGTGTTAGTATTTTTGAA TAGTTAAAAGTTGaagttataaaaaaaatcgttgaattcacgacattttt tttcaaatatggtCAATTTATTGTTTTAATCTACGGAGCCTTAAAAACCT TGAGAACCTTGAAATTGATGTAACTTACTTTGAAAACACCTTGAAAAATG AATATCTTCCTAAAAAATGCcctgaaaaccttgaaaaagtaTGAGTCTCG AGCTAAAAAATTCTTGTTTGCTTCGATTGCAATCATCTTTTTGAATCATG TACATGTATTGACTCAAGTCTATCATACAACACGTTCAGTGTGACATTTG AATAATTTTGAACCCTTGCAAAACCTTGGAAAGAGCCAATGAATGACCCA CAAACTAGACTTTTTTAACATTCAGGTCCAGACACAccatttgaaaatat gaaaaggcTGAAAAAGACAGGGTGCTGCACAAAAAAGTACTTTCCTAact attttctgatttttttttaggCTCAGAACAGACTGTTCTTGATTTgatat aaaattgttcttataaaagagcgTGTAGGATAAatgtatatttattttat ttatcttattttttattaaagCAAATGATGAGGAAAATAATTTAGCATGG TTTCTTTCTTTAGAATACTAGTACATTCAGTTTCGTTTGAATAACGTCTT TT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040971TCONS_00040971Clytia hemisphaericatranscript
TCONS_00040972TCONS_00040972Clytia hemisphaericatranscript
TCONS_00040973TCONS_00040973Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040973-proteinTCONS_00040973-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002647supercontigsc0002647:1..5852 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.07 34 11.07 6.01 246.38 190.52 260.64 218 131.66 223.74 213.83 143.3 150.2 173.54 54.4 74.02 87.6 71.47 48.97 56.24 84.65 80.26 41.86 49.05 250.07 118.81 69.7 49.99 40.43 35.86