XLOC_024995 (gene) - C. hemisphaerica

Overview
NameXLOC_024995
Unique NameXLOC_024995
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002637:3416..7974-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024995 ID=XLOC_024995|Name=XLOC_024995|organism=Clytia hemisphaerica|type=gene|length=4559bp|location=Sequence derived from alignment at sc0002637:3416..7974- (Clytia hemisphaerica)
GAAAAGGCATCCGTCGAAATTAGTTTGATCGCTATCTCTATGACATCTCT
CGACTCACTGAATGCATTTCTGACCAATCAGAATCAAGAGTGCGAGGTCT
CCTTAAAAGCAACCTAGTACATTCAACAGGGCTATTTGCTTCTTGTCGTG
GTGAAGGACGGTGGTTCGGGAGACTCAAAATTTTGACTTTGAAACTGATT
TTTTCAAATTAATTTCACCTGCCATAACATGGCCAAACGTACGAAAAGAA
AGACAGATGGTAGAGGACCACAATGTGTTGTCTGGGTTTTATGGTATGTA
TTTCTTGTTTCAATCTGGTGATTTTACGTGTTTGAAAAGTTTAAAAGGCT
ATTTTAGTGTTTTTAAGCTGTAGATTTTGCTATATTTAAGAGATCGTTTT
TCTCACAACAAGGCAATCTGCGACTTTTATCACAGTGTTTTGATTTGCGC
ACTCAATCTTGTTGTTTACTTGAGAAATCGTGTCTTTCTCATACATTATA
AAAAAAATGTCTCTTGAAACACAATTCCTTAGGAAATTTTAATTCTTTGT
ATACGGCAGTTTTAGAAACATTGTTCAATTAATTCTCTGTCAGGTAGTCA
AAATTAGCTTGTAATGGCAAGATAATGTGTTGCATTGTGATGCTGTACAT
CAATTGAGTATTTTGTGAAGTTAGATTTTTCAGTACCGTGAATGTTGATC
GAAGAATTATATGAGTTATATGATGTATACAATTAAAGAATGATATTCTG
TGTGCTTTGAAGTTTATATATATTTTTTGTTGGCCTTGAAAATACAAACT
TAATGGTTCCTGGTTGACATTACACACGAATGAACCATTATAGGGATTAA
AGTAACTAACGATGAAGATTGTCATCTCACTTCTAAAACATTTATCTTTT
GTTTCAAATTTTCATTGCAACTCTCTTTGAAAGAATTAATTATCATTTCT
GAGCAGTGACATCGAGTAACAGTTTTATTGCATTTCTGTTTTTATTTATG
ATTGGAACTGCACATTTTCAGGTTTGTACCGAATTAAGCAAATGGTCAGA
CAGTTAAAAAGATTTGAGAGAAAGGATTTCTGGTCGGATTGTCGGAATCG
TTTGTTTTGGTTGTGATTTTTTATGAATTCTTGTTCAAGTTTTCTTGAAA
TGTCAATTTCAGGTTTATTGTGGATATGTTGTAAGGCCTTTGGATGTTTT
TAATTTAAAATTTTTAACCTTGAAAGTATTCTCGGTATGTTTTTACTTTC
AACAATATGGGAGTATTTTTGTACATGTTCCCAAGATATATTTGGATTCG
GCAAGGCGTTGAAATGTTCTTACTACTCTGTCTGTCCTGTATCATGCTTG
AAATTTGAAAACTTTTTCGAAATAAATCCTTACACAATTTTTTTTTGATT
TTATATCTTTTCTTATAGCTCTTTATTTTTATTTTCCAGAATCATTCATC
CTTGACGAACCGAGAATCATTGTATTGGCACCATAGAGAGCTTTGAAGAT
TGCTGCTTCAACAACAGATTATGATATACTGTAAGTTTATATACCCCTGG
ATTTATCTGTTTTTCGGGACCAATTAATGATATTCTGATGGACGTTTGAT
TAAAGAGATTCCTGCATAAAAAATCCATGAATAGCTATAATGAAAATCGT
TTACAAAATTAAAGTCAAAGTTGTCAACAATGATTCTATCCTAAGATATT
GACATCAGAAGTTCCAAATTCAAGACATCTGCACTCTGTGGAAGCCATAT
TGAAATAATAATTTTAAAGTTTAATTTCAAACTCTCTGGTATCCTTTATC
CATACTAGGTAAAGATTAGAGAATTGGATAAAAAATTAAATGACTTTTTA
TGGTATACAAAACCTCTAAATGTCATGTGTCATGTGTCAATCATACAAAA
ATCATTTAGTTCAACTTCGGGTATCCTTCTAGTCTGCTCTCAATTATTTT
AGTATGATGACTAGCTGGTATGAACAGAAGTTTTCCAAATNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTGTGACAAAAAAAATTAACTCCCCTAAATAATGACTCCCCAGTCAT
AATAAACTAGTAAATAGTGACTCCCCACCTCAAAATAAACTAGTAAATGA
AGACTCCGTAGAGTTGCTATTTGCTAGGAAATCTTGACCCCCTTTGGTTT
AAAATGACTCCCCTCTATTATCTATGACAAAATTATTTAAAAATTCATTT
GGCTATCCAGGGCTAACTCTACAGACTCTAAGAGAAATACTCCATCTGAG
GGAAGCATTTCCTTCAAGAATTTTTAGATTTGGCTCGAAATTTGTATACT
GTATACTTCCCTCTTTGTAAGATCATGTTACAAAATACCGGCGAGAAATC
GAATGAGGAATAAACGTTTAAACTTCATGTCTACCGACAATTACGTGAAA
AATCTGTTCTANNGTTTAAAATCTGAAAAACAGGGGACAATAGAAATCAA
CGAGAGAATGCGCTTGTCACAGTGATCTTTTAGAAGAAATATTTACAGTA
ATCCCAATGTGATGAATGTTAGCTACAGTACGTCCATAAAAAATTAGTCC
TTCGTCTTTGAAGTGGTATACCTTTTCGAATTTTTGGCCAATTTTGAAAA
TTCTTCCACAGTGAGATGGAGCATCAGGCTTTCCAAAAATATAACTTTTC
AAAAAAAGCTTCACAACATAAAGGAAAATCGAAGATTTAAGCAATGCTAC
AGTTCAGTGGCTCCGTAATCATCANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
TTTTTCTATCGAAGGCTATGGCACTTTTAAAACAGAGGACTAATTTCTCC
TGGACGTACTGTATAAATAAAAAGACAACTTTGGTAAAAACTGTAACAAA
CAGAACACGCGGGTATAAAACAAAGGAACGTACAAAAGTTTTTCTTTAAG
GACCTTAAAATGATACCTGGAAGATCTATTAGAAAGGCGAAGGAAGAATA
TCTTGTAAAGACATTCAAATACGAATGCTAAAGGGCCCTTATGTATGGAT
ATATATAGTAAAGTAGTGTGAACAAACAATGACTACTTTGGGGGGGGGTC
ATGATCTTGACTCCCTCAGCTTTTTTAAGGGGAGTCATTATTTACTAAGG
GAGTCAATATTTCCTAGGAAATTTCTACTCTAGGGAAGTCATTATTTCCT
AGTTTATATTAACTGGGGGGGTCAACATTTACAGGGAGTTAAAATAATCC
GCTACCACACCGGAATCCTTTTAAATACCTTTCAGCCCTACTTGGAAATT
AACTTTTGTTTCATCCCTTCGAAATTCAACGTTTAAAAATTGCATTTCGA
AATCATTGCCACTGAATTTGCTAACCTTGAAACAAAGGAATTTCTATCCC
CATTGGGATTTTAATAGGAGTAGGAATTATCTCCACTGAGAAGAAAAGTT
CCACCGGGGCTGTGAAACAGGGGTGTCTATGTCATTCTTTTAAGTTTTAA
AGATTGTTCAGCTTTGATTGTCTATGTTAATTATTTTAAAAACCGATTTA
TTCTCTCGTTTTTTTTCAGGAAATCTGTTCATCAAACGACGGCGATATTC
AAATACTCTGGAAGCATTTTATACGTTTTTTCTTGTTAGACTTCGAAGCG
AAACGTATGGTACAACCTGTGGAATCTCTTCTGTGGTCTTTTGGGAAAAC
GGTGCGGATTAGCACTGTATAGCAGAAAGAATGTAGAGCTCAGTTAACCA
TGATTGATGTTGATGCAGAAGATCGTCACTGAAGATTGATGCAGGACACG
TCAGTGACGCCACAATGCTTGTGCTTATTTTATACTTATAAGGTAATAAA
TAAAGTCTCCGTCATAAATTTTGAATCCCCCTCAGATCCGCCAGTATGTA
TTGCGCTTACTTCTATAGCTTTTTTAGACCACTTGCAAAGAATTTTTCAT
CTGAAAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040944TCONS_00040944Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002637supercontigsc0002637:3416..7974 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.75	13.81	7.5	5.37	0.17	0.1	0	0.15	0.05	0	0	0.05	0	0	0	0	0	0.05	0	0	0.06	0	9.61	8.38	0	0	0.2	0.84	2.5	4.81