XLOC_024643 (gene) - C. hemisphaerica

Overview
NameXLOC_024643
Unique NameXLOC_024643
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002448:4823..9182+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024643 ID=XLOC_024643|Name=XLOC_024643|organism=Clytia hemisphaerica|type=gene|length=4360bp|location=Sequence derived from alignment at sc0002448:4823..9182+ (Clytia hemisphaerica)
gttttcttcttcaagTCACGTCCAGATTGTTTGATCACGTGATGAATGAT
GCCATTGACAACCAAGAAAGCAACAACAAACGTCCACAAAGTCAAACAGT
CACTGCAACGATGTCCATTGGATTGATCTCCAAAAAGTTCTGGAGCAAGC
TTTCACAGTTTCAATATAGTTATAAAAATCTACTCCAAAAGGTttttctt
atattcattattaTAGTGCGGTTATATCTTAATCGGTTTAATCTTTCCAA
GATCTGATTTCAGGGGCTAAAGAAATCACGAAActttctttatttatttt
tgcaaatcatagttttgaaaaaatttgcttttaaaaGATTTGCTATGAAT
AGAGGATGGATTGTCACATATGTTTATTATTCATGGTCAATTTTCAAAAC
GATGCTTTGCTTTCAGTAACAGAATCAAATGTTAGGAGAACTCTCATTGa
gattttctttttatcttaaacttatTATAAGAGAACTGGGTAACACTtta
tttcttacatttttttcagCTCAGAGAAAACAACCAATCATTGATGGATC
TTGAACAGGCTATTTCAGATTTGAgacttgaaaatcaaaaactccaccGA
CAGAAACGTCAAAATGCACCAAAACTAGCTATCAAATTTGATGGACCAAA
ATCAGAGGTGGCAACGCCTCAAGATAATGATACACTTTCAAGCGGTGACG
GGGATGTAGACAAAGCCTCAATTTCAACACANTAGAGTTGGCAACGCCTC
TAGATAATGATACACTTTCAAGTAGTGACGACAATGTAAACAAAACCTCA
ATTTCAACACAAACATTCGAAACAGCATTTGTAGAGTGTATGACTTGCGA
CGTGCTACAAAATTATTTACTGGATATTGGCTCGTGTGTTGTTTGTATTt
gtgaaaatcaaaatctacCTTCAGCAATTAACAAACATAATAAAATTCTA
CGAAATACAAAATTGAGCCCTAGTAATGTCAACAAATGGTCAAGCGAACT
TCAAAAAGATTTGAAACGTCTGGAAAGTCTGGTCAATGAAAAAGAAGAGG
AATCCAGAAAACACGAAAACGAAAATTTGGATTTACACGCGAAAATTGGA
CACCTCGAAAAAGTAATACATAGCCTTGAATCagagaaatcaaaatttga
tagCATCAAAACTGAACTTGAAGTAAAGTGTGATTTTCATTCGAAACAGA
ATGAAGATTTTCAGGCTCGTGTAAAGGAGCTTGAAAAAGATTTATATAGA
AAAGAAGAATCTTTGAACAAACGAAATGATCATGTTGCACAGTTAGAGGA
GCAATTAAAAAATTTGACAGAAGAAATTACAAAACTGCAGTCATCGAAGC
AAATTTTAGGTATGTGTCTTTTTTTAGGGCTAGCTTAACGAGCCTTTAAT
AGTGTTCAGTTTTATGATATGGATGTTCGCAGTTTTGTAGATAGCTTTTC
TGGTAAAGTTAAACTAAGAACCCCAACTGTAGAGAATATTTATGTTCCAT
TAGTTCAACCTTTTGCAAATCGCTCGTTATATTTCAAATTAAATCTTGGT
GATTATGGTCCGAGCATTTTTACAATTAATTTTCTGGGCAGATGATATTT
CCAGTTAATAGAAAAGCTTGAGGAAGTTGAGGAGTTTCTTATCGCGTGAG
ATTTAATTTCGTGAGCAAAAAATTTAGCGAAATTTCTAGATTTCTTTTCA
CGAATAAGTGTTTTGAAAGATCTCACGTGAATCACGATCGCGAATCAGCC
AAGAATTAGTTAATAGTTGACCTGTAAATACAAAAAACATACATATAATT
ACTTACGCTGAAAATATGATTTTGAAAATTTCTATTTCTATTTGTTATAT
TTATAGAGAAAAGTTTGAGTAATCTGTCAACCCAACTGGAGAGCACCAAA
GGTCTCCAAGAGAAAAATAAAGATTTTAATGAGGAGCTTCAAAATTACAA
AGAGAAATTCGAAAGTCTGCAAAAAGATTTCCAATCAACCATGGACGAAC
TGACGGAATTAAAATCGGAAAACAAAATGTTGTTAAAACATGACAAGGTG
AAGTTTTTTCACAGTTCACAAATCCTTAAAATGTTCTTTTAACTTGTTCT
TAACATTCTGGCCAGCGAAGCCCATAAGGCTTCTTATATAGTTTGTTCTT
ATAAGAAAAAAGTGTACCAAGTGTGGTCAAAACAAAATTTTCAGAAAATG
AGCTAGAACGCTAAGCAGGGCTGACCCAAAAATTGGAGTTGTGTAAATCT
TCAAACCAACAAATTATACGACTTTTCATGACCATCTCAAATATTCAAGC
TGAGAGAAGATCATTTGCTTTTCCACAGACTTTGCAAACCAAACAATCCT
CCTTACTCACACGCATCGAAAATCTTGATGAACAATGTGACTCATTGCAA
GCACAACTCAATGACGTCACAGATGAAAAAGAAGAAGTCGTAAAGGAAAA
TGAAGAATTCAGAAGGAAAATTGTTCAACTTGAGGATAAACAGAGCAGGG
TAAGGATATTTGTACGCTGTATTTGCTAAATGTTTTCAATAAGTGAGTCA
TCCATCCCTTTTTCGCAGATATAGATGACGTTTGTTTTATGCTACTGTGT
GGGAACAACATTCAACGTGATGTCTAATTACATTTTTGCATTAAACCACA
TAGACTTAAGCTCGATATAAATGGAATTCCCACTCACATATTTTCCTTTA
CCTACCTGAACTTATACTTATTTCTCCGTCCTCAGAGCTCTTTTGATGTT
CATATACTGAAAAATTTCGTTACTTTAGAACGATATCGTTATCAAACATG
CGAACTCAGTTCGATCAAACGATGAAACCAGCCTCGAGAATTTTCAACAA
GAAATTGAACACTTGGAAGAAGTCGTCAACCTTTTAGTCTGTTATCCAGT
TATGAGCAATGATTATCAAAATGCCGAAAAGAGATACACTGAAGTGATCA
ACAACCGTCGTTTCCAAGGTAACCATACATTCACGATcacaatcaaaata
aaattttataaggAGGTGTTTTAGGAGAATAGAATTATCCCCTTTGTTTg
attgatattcatgatgtaatatTTTCTAAGGAAACACCCTTGTTGTTGCC
AATAGAGGcaaattttaaaacctacatttAGATTTTACGTTTTGAGTACG
ATAATATGGAAACATTAAGAGAAATGGGCGATAGGGAATTGAATTTTGTT
CCAGTTATAGAGATTCAAGTCATGGAGACTGTACTTCGAAATTTAAACAA
TTCTTCTTCTTTGGGTACCTGCTAGGTAACCATGGCAATAGCGACGGAGA
TATTGTTTACGATATGGAACATCAATTGAAGGCAAACACTACTCGCATCG
CCATCttggaaaaacaaaatcattcaTTACGTAATACATTGGTTAAATTA
GACACTGACCACGATGAAAAACAGGTAATTACCCGCTGCATTTACTTAAT
AGCGTTTTCTTTTGACTGAGTTATATTCTACTGTAAGGGAGGTCAGAATC
GCACGAAGTAGTGACTGGAATCAAAATTTGCGAATAGCGGTGATAGATTG
CTGGAAAGTGTACTTTGTgtgttttcaattttaaaaccgTTCGATTTTTA
ATGTTTAGAAAATTTCTTTccggacaatttttttgaaagaaatataaAAC
GTTTCATGATGAAGTGTTTATAAAAATCTGGAAGTCCTTCATCAAAAGCG
CAAAGTAAATGTTTCCACCTATTCAGCACCTAATCGAACTCGTAATCGAA
TACACTTTCTCACTTTTAGAAATCCCAAGAAGTTGAGTATCACAACAACA
CATCACCTACGAAGAGTGAAAGGAACGCCAAGTCAGCTCCTCATCGAACC
ACATCTAATGCTAATAACACAGAATTTGAACCACGCCCCCCTTCACCCTC
TAAAACACGCCAAAACGTGCGGCCTCGTAGTGCCGGTAGACGAAGTAAAG
ATGATATTCAAAGTAGATTAGCGAGTCTAGAgaaactgaaaaacactgtC
AAACAACCGGTAACCGAGAAAAATAGAAACAATAACTGGGTTTCTGGTGA
TAACTCACATGATGATAAAATGTTGGAAAAAGAGACTTCATTCACTTGTG
CTGACTGCGATAGAGAACATGTATCGAAGAGAGATTTAGATATACACAGA
CCCTTCTGTTTTAATCGTCAATGATAAAGATAATTTCCTCCCGAAAACCT
CTCAAGTCCCTTGGCATGAAATAAGGAATTTCTTTTGCTCTATAACGCTA
TCACATTGATAGTTAATTTTTCCTTCCTTGTCTTTAAAATTCTTATGATG
AATTACTAAATCATTTAATACGATTGACACCGTTTAAATCGATTTGGTTT
TTTAGAAGAN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040516TCONS_00040516Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040516-proteinTCONS_00040516-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002448supercontigsc0002448:4823..9182 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.05	2.03	0.85	0.31	2.07	1.76	1.04	1.23	0.52	0.87	0.22	0.28	0.22	0.03	0.18	0.31	0.28	0.31	0.5	0.4	0.42	0.22	1.43	0.81	0.42	0.54	0.64	0.27	1.05	0.91