XLOC_023464 (gene) - C. hemisphaerica

Overview
NameXLOC_023464
Unique NameXLOC_023464
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001990:22896..28908-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023464 ID=XLOC_023464|Name=XLOC_023464|organism=Clytia hemisphaerica|type=gene|length=6013bp|location=Sequence derived from alignment at sc0001990:22896..28908- (Clytia hemisphaerica)
CAAATGTCGAAAATATGATGCAATCAAGCCGAATAAGCCAATCAGCGGCT
CAAAGCGCCAAATTCAAATTCATTGTAATGGTTTTACTTCCTAAATTAAA
TATTCATCCGAAAGACTGAGTAAAGTGACCACGTTTAAAAATTTCGGGAT
AAAAATTACAGACTGCTGCAAACATAAATGATTTTGAGAATTATACTGAA
TGAAACCCAGAAAATTAACATTATGTTTATAATTGATCTGTTTGATGATT
TTTTGTCATTCTAAAGTTTTAAATTTCTTCCGAACAAGCATTTCACACAA
TAATGGACACAATTATTTGAATCCGTTTTTGGTCTGTAATTTTTAAATAT
CGGGAAGAATTTGTTTCTATAGATTTTATCAAAACATCGCTCAGCTACAC
GTGCACGGCTTTCGGCTTTAGACTTTTAATTTTAACTTGTACCAAGTCCA
AGAAACAAGTCAAACCAAGAAGACAAAAAATTGCACCAAACATGTCAATG
CGAAACAAAGTGCCTACTGAAAATTTACTAAACCTCAATACTGAAGAGGT
TTCCACCATGTTGACAGACGTCCTTCCCCCCGACGTGGCAGACCACCTTG
TTGGTAAGTTACTTTTTTTATTAAAAAAATGTAAGTCTTACAGAATAGAT
TCTCCTATCTCGTATTCTATCGTCCATCTTATGCAGAGAAAATGTAGGAT
AATAGGGAAACAATGAAAAATTGGACAAATATTCCAGTAGTGACACACTG
GCTTTTTTCGGAGCAGCTAAAAGACTGAGAAGACTCGAACATTGTAGAAT
AATTTTTGAAAATGTCATCCCTATATAAAGCTTGAACCGTCAAAATATTC
ACTAATCATGGATTTTTTGCCGACCTTAAAATTGCTCCCAAAGATCTTTT
GTTTTTTTCATTTGAGAACTCACCCCCAGCAGTTTGCGTCATTGATGGTG
TGATTGGGACTTTTTTTTGGGGTGATGGCGTGATTTGAAAACTTTTTTGA
CATGATCAAGATTTTGGCGTGATTCATGATAAGGCAAAAATTTGAGAAGT
GATGCATGGTTTGGGCTATTTTTTTATGACAAATTTTAGCAATTTTTGTT
ATGTGTGATGGAGAATTTTTTGGCGTGATGAGGGGCTTTGCTGGAGGGGG
CTCATTTGAGGGCAAGTAATGTGTCCTGTTGTAATTTCTTATTCAATAGA
CCTTCGCTTTTGGCCAAAGTTCTATATTGATATTTATTTTCCGCTGATGC
CAAACTATTATCCATTAATTTTATCTAATTAGCACAACAAATGGATGGAC
AATTACTATACACATTGATAACAACAGATGATCAATTTCTTACACTGGAC
AAAATGGGGCTCACTGCCAGGCAGATACTTGTATTTAAATCTGTTTATCC
AAATTTGANTGATTTGAAAACTTTTTTGACATGATCAAGATTTCGGCGTG
ATTCATGATAAGGCAAAAATTTGAGAAGTGATGCATGGTTCGGGCTATTT
TTTTATGACAAATTTTAGCGATTTCTGTTATGTGTGATGGAGAATTTTTT
GGCGTGATGAGGGGTTTTGCTGGGGGGGGGCTCATTTGAGGGCAAGTAAT
GTGTCCTGTTGTAATTTCTTATTCAATAGACCTTCGCTTTTGGCCAAAGT
TCTATATTGATATTTATTTTCCGCTGATGCCAAACTATTATCCATTAATT
TTATCTAATTAGCACAACAAATGGATGGACAATTACTATACACATTGATA
ACAACAGATGATCAATTTCTTACACTGGACAAAATGGGGCTCACTGCCAG
GCAGATACTTGTATTTAAATCTGTTTATCCAAATTTGACAACTGATAAAC
CTGTGCCAATGACACCATGCAGGGCAAAAGTGCAAAATCACATTGAGAAT
ATGCAGTAAGTAGATGATTGTATACCTTTTTGCAAATTGCAATATTGTAA
GCGGTTTGGATCACATTGAAGATACCTTATTACACTTATATAACTTATCA
AGTATATAACGCGGGGAAAATGAGTGCGACAATTAATTAACTTAAAAGGC
AGGATTTTTGAAGACTACCTTAGCTCAAATTTTGTATGTCATGTTGAATA
ATTAAAAACTCCACCATCAAAACAACNGTATATAACGCGGGGAAAATGAG
TGCGACAATTAATTAACGCAAGAGGCAGGATTTTTGAAAACTACCTTAGC
TCAAATTTTGTATTTCATGTTGAATAATTTAAAACTCCACCATCAAAACA
ATGACAAGAAAAATTTATTACACTGTTTTACTAATTATGTACTCCATGTG
TTATTGTTCTAATGCTGGAGTTTTTAATTATTCAACATGACTTTGTGATT
TGCAAAAGGTCTATTAACCAATTCGTGTTAATAACATGAGTAAATATATA
AGTGTAATAAGGTAGGTAATTTAGTTTCAACATTCTGTGATCTTAGAAAG
GCCATATTCTCCATAGACAAAATTAGCAAATTAGCAAAAAAGAATTAGTG
TGTTTTATCCTGAACTTAGGAAAATTCTTCAAATCCACCATGTATCAGCA
TGTATTGCAAAAACTAAAGATTCTTGAGATTTCTTGTCATCCCATCTTTG
TCGTCAAGAAAAATATGTCATTGTTTATAACTTTTTACTTATATATATTT
ATTGACACTGACTGAGATAAAAGACAGATAATGAATACATTAAACCCAAT
TAATAAAGTGAAATTAAGAATAATTCTACCTTTTTCTTTTAGACAAACAA
CTATCAGGAATCAAGTTGCTAGAAAATGGACTGGTAATTCTTTGCCAACT
TTTTCAAAGGAAAGCCAAAGCAATCTTGAAGAACTTACTGATTTTGTGAA
AGACTTACAAAAAATTCCAATTTTGACATACCTGGAAGAGAAGACCATCA
GGAAGAAAATCGTCAAAATCATGAGCGAAAGAAGAAGAGCAGTTCGTAGT
GGGAGGGACTATGAGGTAAACCATTTTTGCAGCTTTTCTTAAACAATGTA
TTCTAGCAGCTCAATTAATTCATTCAAAGTCCCCTTTTAGGTCTCTACTG
TTCTTTGTAGGATTAATAAGGACAACTTGACAGTTAATGTAATGTAATGT
ACTTACTTGGATTATAGGCTCCACCAAAGAATGCATCAAAGCCCGAAAAG
AAAGCCAGGAAAAAACTTGATTTGGGAAACAATGTAACGGTATTTCAATT
TTTGCATCAAATTTAAAGTTCTTTTTCTTTCTTCAATCTTGGCAAGAACT
AATTTTGGCGAATGTCAGGGTAAATTGTATTATTTTTGCCTTAAATGTGT
TTAAACTACCGGGTGAGCCAAAAATATTGAAGTATTTGAATAGGACTAAT
AAGATTTTAGATATCATGCTCCCGAAACACTTTGAACATTTTTAATGAAG
ACACTGGAAGGACACCATATTTGAATTTATTTGACTCATTTGAAGAAATG
GGAACGTCAAATCGGCTAAGTTCACTTTGAGTTGAAATTTTATCCTTTTC
TGTCTTAAAGGGAGATGCAAACACTACAGCAAATGATGGCATAGATATTC
AGGTACATGGACAATTTTTCGCTGTGGCTCATTTTTCTGTTTTCAAAAAT
TTACTTCTTATCTTGGCTGATTCAACAAAGGTGTTGAACCTTTCAGACAT
AAAGAAAAAAAATTATTGAAATGTCAAAAGAAATTTTGCTTAGTCATATC
TATGTACTGTACACTGTTTCCACTTAAAATAAGGTCTGTGCTTAAGGTTC
TAGTGTTTCTTGTTGGGAAACTTGCCAGGCCTCATTATGACAGGTATACT
TGACCATTGGCCATTTCTAATTTAATGAATTTGTTCAACCATAGATTAAT
TCAGCTAATAAAAGAAAGAAAAGCGAAGAAAAAACCGAAAGTAGTCCTAA
TAAAAAGATAAGGAAAAGTGTAAGTAGATATTTGTGTTTTAAGATGTTAT
TTTGCACGTCATGTGTTACCAGATTTTGTAATCTGCAATATTGTGTCATT
TCTTTTTTGAAGAAATTTGAATTAAAGCAAGATAAACAACAAACTTGTAA
TAATCGTCTTAAAAAATCAAATTTTTGTGAGATTTTTTAGATTAAGTTTC
TGAAAATATCTTGCCTTCATAACCTTATAGAGTATGGATCCAAAAGAGAA
GAAAGAATATCCGAAAACACCAAAACAGAGGAAGGAGAAAAGGAAAACTT
CAACTCAAAATGATGAGGTAAGAACTTAAATCCTAAATATGATCCACTTT
TTTTATTCTTTTGATATTTGTTTGATTTTGCAGACTTTGCAGAGGTTATA
TATTCAATATAATTTTTCCTTAATGTAATAACAGCGAAAAGGGCTAATTA
CTCTTATTATTCTATTTTACAGGACGACCGAGTTGATATTTTCTCTCAGG
ATTTAGTAAGAAATTTGATATCTTTGTTATACCATAAAGAAAGGAATGTG
ACAGAACATTTATTTTGGCAAATATTGGGATTCAACTTGGCAAAGCTAAT
GCAGTTTTTTCCAAATTTAATTTGATTTGAAAAGTGAAAAATTCCTCCCT
TTAAAAAAAAGTTCATGATATAGGTTTATAATTCAAATACTTATACTCTT
TCCTTTTTTTTAGTTTGGCAATCAATATAAAGCAATTGATCCTGATGAAA
CAGCTTCCCTAACATCATCACCGATCAAATCACTAAGGAATACACCAGAA
AAGGTATGATCATTAACTTTTTCTTATTTCTAGCCTTCTTTTTTGGACAG
TTTTAAGTTTCCTCCTTTGCAAATACAATCATTCTATTTTCAAGTAATGC
TTAATTTACCATTTAGGAAAAATCTGATATCAGCGATGTTGGGTCTCCTG
ATTACCCTCCAATACCCCAACAAAGAAAACTGCAAGGTAAAATGCATTTC
ATTCATTTACTAAAGTTTTTAATAATTTTACACTCTGTTAGCTTATTTTT
CACGATTTTCAGGCTTTTTTATGTTCTTTAAAATGTTATTAAAATGCTTT
ATTCACTTTATCACAGGAATTCACTTTATTGACTTAGAGAGGTCTTGAAA
TCAGCATTTTTATGTCATTTCTAATCTAAAATATAGAATTATTTTGTTCT
TAGATTTTTGCTCCGCCTTCTATTCTTATAAAATGCATGTTAGTACATAG
CTCAAATTTATGCTAACTTAATTCCCTTTTAGAAGAGTCACAAGATCCTT
TTGAATCTATGACGCAAAGCCTGACGGAGCAATACGGAGTGAAAGGTAAT
ATTGGCATATTGCACTCTATTCTTGCTGAGAAAATTGGTGTCTGGTTTGA
GGTTTTCTTTTCAATTTCCTGTTTTCTAAAAAAAGAACAGGCTGTCATAT
TGTATCAGAAGGCGAAGGTGATTTTATGTAGTGTTCATCAAACCTGTCAA
ATATTCTATACTATAGCTTTATCTATTTCAGATCTATCGGACGAAGACTT
ACGTAACATTGCTTTTTTCATGACCGTTATGAAGCCCACCCTGCCCGAAG
AGCCTATTTCAAAGAAAGATTTACTATCAACCATTTCAAAAACGGATTTC
AAAACGTCGGTGCGCCATTCCACTGATACGATTGGAACACTATTTGGTGG
ATGGCTAATTTAACAGAAGAAGGTGCTCCCACTGGCGAAACATATAAAGG
AATATACAGACTTCTACATCGACAAAATTTGGGCATTGAAATCTGGTATA
TTGAAGCGTCAGAAAGGTAAAAAGTAAAATATGATTGACATACAGTACAG
TGATGTGTCCAAAAGAAAGCGGGAAAGCAATATTGGTATTAAGTACCTTA
AGTGTATTAATTTTGGCGGATGGCATATTTTGTAAAATTTGGCGGGTATT
TAATTTGGCAGGTTGGGAATTTAACTTATTTTGGTTTTAACTTAAAAATG
CTGATTTTCAATAGAATTTCTATCCTAAAAAGATTTTGTTAAATTTGGGG
ATGTTCTGGAGTTTTTTTATAAGATACTTCACTAATTGGTCATTAAAAGT
AACAGAGATGACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039012TCONS_00039012Clytia hemisphaericatranscript
TCONS_00039011TCONS_00039011Clytia hemisphaericatranscript
TCONS_00039010TCONS_00039010Clytia hemisphaericatranscript
TCONS_00039009TCONS_00039009Clytia hemisphaericatranscript
TCONS_00039008TCONS_00039008Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039010-proteinTCONS_00039010-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001990supercontigsc0001990:22896..28908 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.1	4.4	1.3	0.54	27.23	20.11	13.57	14.24	6.75	10.18	9.93	9.24	4.07	5.05	3.75	3.57	3.32	3.81	1.7	2.34	3.43	2.72	1.76	1.93	6.51	10.58	1.6	1.23	0.58	0.36