XLOC_023437 (gene) - C. hemisphaerica

Overview
NameXLOC_023437
Unique NameXLOC_023437
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001981:17310..28337+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023437 ID=XLOC_023437|Name=XLOC_023437|organism=Clytia hemisphaerica|type=gene|length=11028bp|location=Sequence derived from alignment at sc0001981:17310..28337+ (Clytia hemisphaerica)
catgtttttgatgatatcactcaaaaacaggggtggtacctggaaatctt ttcagaaaacagttactaccaaggtcctgaaaaaaagtgttgaaaatgca cttactacacatcatgtcttgtagtaactgtgTGCCCCCCCTGATACAGA CTTTCTTATTGGACCTACATGGAGTTCGTTCGTCTGTTTAGTTACCAGCC TTTCTGGGGATCGGCTCATTTGTTTATTTTAACAATTTCTTTGCACAAAT GTCATGCCAAAAATACGCCAGAGCCCGATATCCAAAACATCGGAcattgg gcaaatttgggccaagaatcaactaaaatttgggGTTTTTGACAGAAAAA TAGATAGCAAGGTACTATGTAAGGCCGCTGAAGTGATTTTTCCCCAGAGA ACTTTTGTTCgggttttcgttttttttggGGGAAACTCCCTTTTGTTTTC GATCGTTGATTTTCCTCATCACGCTACAATAACAATTAACACATGTATCA GATAACCTTTCCTGGTCATATGTACTGTATGATTCGAAAGTGCTatgaag aattttttattttaatccaGTCATCTGATTTATTGGTATTGTGAGGACAA GAAACTATTAGAGAGTTTAGTTCAATGtttatttaaccctttaagtgcca atgtcgtatatatcagacatgggctatgtaggagggcgaagccctcctgt aatgcccagtttgagttagaaatcgtcatttttggtctaactggTAGGAA Taagattgggcttcatggtcaagcaaaaaaaacaatcaaaagtgagtctt tccagcgagattttaagccaaaaagtaaaaaaaaaatcaaatatttgaca aaaatccacttttttcagattttgaccgttttttgaccatttttggtcaa cgagtgatccaagaagcttcaaatttggccctgctttacttgattctgtc ctccagcgaattactttgaagttttaccactgggtacctttctatcattc aggcaggttcGCGCAGAAATAGGAGAATGTAAGCATCTCATGTAACCATG GCTAAAAACataggagactctaagctatccaacgagctataggaacaagc ttctaactccttccaGATCCCGAGATATaaacctttaaagtttgaactag ctaTAACTCTTCTTGGCTTTTATTTCAGGCGATTCAGTGGCGTTCCCTAT GAAAGAAGAATTCgccaaactttgttttgaaacacTTTTGGAATTTTCAT TCTTCAAAGAAACTGATGACAAAGGTAAGTGGTATTCGGTCACGTAGAAT TGTTCGAAGAGATAATTAAAACTGGATGTGTAACTGGCTCTGGTCTCATC AACGCTTgacattaaaggttttgtttaaaaaaagagtgatatcgtttact tactcatcagttttaattcacaagctttttcacattggattgatacgaat gtggagcaagattggtcagaaataggaaaagaaaaacatttttctgctta tatcagcataatataacaataggtagacactgtcctgatatgaaatatgt gtcttaTATGAAACGGGGACACTTATATAaattaaaacctttaacattct ttcattttcagaaGAGACACAACTTTCGCGACTGGCATTGAGTTCATTGA TGCAAAGATGTCGCGATGTTCTTTTGAAATATGCCGAAGATGAACGATTG AACGGAGAATTTCCACTACCTAGGTTTGTCCCTTTGTTTTCCATTTTCAG GCGACTctccttttcaaattcaattgtCAAGGTTTGGTctctttttttct tccattttcttATGACTTCCACTGccagttttttggacctaccccggtgg ggtagaggtcctataaattaacctgtgttcgtccgttcgttcgttcgttc gtctgttaccaacttttctcaggattgaatcataagAATCCTtagatttt tggtacaaaggtgcaaaatggtggtggggaAAATGTGACGGTGCctggtt ttcaaaattaaaaaacggtttttttggactttgtgaaaaattgaatcatt aattttttctgattttttgtatgaaagtagggtaccatcacaggtaaaag atggctcaagaagatttttgcaaaaaaattttgttggctcaaaaaacgca tgtttatctatgagaatcactattaatgagcatacatcaatgttcttagt caaattactcaatttcttttatgagatagatgttttttttttgctcatga gggcttacttttgaagaatatatgtgtttagacatgaaattttggttgct tggcgtgtttttatagaaaaactggccaaattcgatattttttataagca cattatcaattaattaaatattagcttttctcgagattggctcttttatt ctatatgattttttgcacaaagatgcataactataaaccctcgaatgtga cggagctcgatttttggggaaaaaaatcagggtaaatttcagctaaaaaa acggctaaaaaaggttttttggactttgtgaattattggatcattgtttt tttctgattttttgcatgaaagtagataaaagatggctcaagctgatttt tgtaaagaaataatttttcagctccaAAAATGCATCTTTATATCTAAAAG AATCACTatcaataagcatacatcaatgttcttagccaaattactgaatt ttttgatgagatagatgtttttttttactcacgaagtcttgaatgtaaaa aaatatttcaagagcatgaaactttggtttctaaacgtttttttataaga aacaaacaactaattttaatagatcgtcactatttgtgttttgaatgatt ttttaatggtcacgctcacatagatatcaattatatatgtgttaaatgca taaccaggtaggtccattaaaagtatcacttgttttttgttcttttggtt atacagggtgtccctaattaaagtatcgagtttgaacatgcgattgagta gaaaagtttgtgtgtgttatcgctgaaatataagaacgttctccatcaca caggcttattacaaaaggtagttacaaggtacagggtgtccctaataaaa gtatcgagtttgaacatgcgattgagtaaaaaagtttgtgtgtgttatcg cttaaatataagaacgttctccatcacataggctcattacaaaaggtagt tacaacgtataaattaatcaataaaaagagggagagcttaaaatacaatt ttgtgaatacacacttaaaactttctactcaatcgcatgttcaaactcga tacttttattagggacaccctgtataaatTAATcgaaatgacaaagaaaa aagagggagagcttaaaatacaattttgtgaacacgcacataaaactttc tactcatagttgtgtttcgactcgatactttaattagggacaccctgtat ataaaCCTCTTGAAAAAATAGGGCCGCAAGCTTTTATAATAACATAAACA CAGGAACATCAACGAGCAAACACACGTTGCACTAGTGTTTTATCGCTGGA TGTACATTGCATTTAAATATCTAATAAATATTAATCAACATGACTTcgta aaacatgaaaaatcgtGAATCTAGATAGTTGGTAGTAGCCTCTACCATGC CGCCCACGAGACACAGAATCTTGCCTAACCGTAACAAACCGAACTTTATG ACTTGcattcactgacctttatatatccctagactaagctatatccgcca tcctTGATCGAAGTTTTTCTTGAATTGGTACCCGCAAAGGAGTCatagtg ttaaaaattaacgtctaacggcgctacatcatcaaaagtattcgagggaa agtagatctagcgctctcgatgcatttacaccactaCTGAGTAGTGCTGG CATTAGgctaccacttttcaaaaagctccgatcaaagattttgcttagcc gggatataaaggtcagtgcttaCGTTGCCTTTTCAGTCAGCGAAGatgag tttggtacaggctataAGGGAAGAGGCTTTAGATATTATAAGTGAAAGGA TCAGTTTAGGTTTACGTATGAATGGATAttatttttgcgtttttacTACT TAGCAACGAGGTTTTAGGTTTGGTGGTTTTGAATAGGAGGAGAATTATTT CATTCACTGTTTATTTCGTTAAGAAAACGATATTTCGTAGATTTACAAAC TTAATTTCACAGACTTTTCCTAGTTTTTACTGAACTTTAAGGCAGGAGAT TTCGAGGGGGGCTGTAAATTTCATTGATGATTTTTGGACcctttttcaaa agtttatgTCAAGTAaggaatttgacaaaaattcgcaaaaaagtaaaaca ttcttccttttttgctttatttttgttcttttttataaatttttgttcCT AAGAAAGATCTTTCTAAAAGAAATCACGAAATGAAATTTATTCGAAAAGA AGAATTCTCGGGCGAGATTTTTAACCCGTTCTTTCCAAATCAATTGAAAG AACTTTGCGTCATCGTGCAATTCTTGATTATAAACCACAATTTTTTTAGT AAGCTTCAGTTAACATTATACGAACCAGTCTGTGGGAATAAGCTTAGACG CCAACTCTCTCTGCTCACTGACACTTCCTCAGTTGAAACTGAAGGATTTC TGTTCCTTTTATTTTCCTTCCTGTTTTTCCCGAACGTCAAAATGGTCCAC AAAAACTTGCGAAAACCAGGGATCATTTTTGCGTagatgaaaatgtttaa aatgttGTTCAAGTAGTAAACGAACACCACAATTGGATAAGTTAATAGCC TGTAACTATGGATAATAGTTGAGAAATAAGGCTTGTAATAGTTTGCATAA ATCACTAGACTCCACCGTAAGATATCTAACAACCTCACCGGTACAACAGT AACGGCGAAAATGAAGATAAGTCCGCTCAAAGTATGTAAAGCACGTCGAT TCCTGAGCCGGCTCAAATCGTTTAAGGAGAATTTGTTGACCTGTACTTCC TTGTGTATGGTTATCGATGACCTCCGATAAAAATAATACATCACTGCTAG TGGTACAAAACTGTCCAGAACGTATCTTCCTGCTGTTTCCGCTAAATAAG GCTCCAAAGGGACATCGTATACGCAGCTCAGAAGGCCATCGTACACTTTC AGCTTTATATTCAAATGATACAAGTAGGGATAGATGGGTACGGTCCAGAT TAGTAAACAAACCAAAGTGTATTTCCTTTTACCGATACGTGGTTTGAAGG GATGGACAATAGATCGGTAGCGAGCATATGAGATTATCATTAATAGCCAA CAGGAAACCAAAGGACACATATTAGTCGGGAACGTGCCCAGAAAAACACA TGCAAATTCACCCAACGTCCAAGGAGGAACATTGTATTGTGGGTAGAATA TAGTGACATTGAAGCTGGTGAATAAATCTACCAACGCCAAATTGATGATG AGAAAATGGTATGAACTCATCTTTCGTAAACCTCTCCTTAAACTCTTCTG CACGAAATAAATAATGATCAACAAATTCCACAAACTTCCGATGCCAAAAA TAATGGGGAAAATGTTGAGGAAGAAAGAGGCGACCGTGTTTTGTGCCCAT TGAAACACTTTGTCTTCCTGTTGAAAAGTTGAGATCGTTGTCACATTGTT GCTGTTATTTGAATgcgccattttgaaagaaagttcGTAACTCTTAGCAA CGTTTGTAGTCTTGTAAAAGTTATATTGTTCAATTTCCAAGAATATGTCG ACAAAACATTAATCTCCGTTTAAGACTAAGTTCACGTAAGAATGTGAGAT CAaacaaatctcaaaatttgtcatttgaAATTCTTCGTGAAAGAAAANAA ACCTCTCCTTAAACTCTTCTGCACGAAATATACAATGATCAACAAATTCC ATAAACTTCCGATGCCAAAAATAATGGGAAAAATGTTGAGGAAAAAAGAG GCGACCGTTTTTTGTGCCCATTGAAACACGTTGTCTTCGTGTGGAAAAGT TGAGATCGTTGTCACATTGTTGCTGTTATTGGAATgtgccattttgaaag aaagttcGTAACTCTTAGCAACGTTTGTAGTCTTGTAAAAGTTATATTGT TCAATTTCCAAGAATAAGTCGGCAAAACATTAATCTCCGTTTAAGACTAA TAAGTTCACGTAAGAATGTGAGATCTTAGCTAATGACTCGATCAAGCaaa tctcaaattttttcaattgaaaTTCTTCGTGAAAGAAAAACATGGAATAT ATAGAATTGAATAAACAATGGAGAATCACTAACATAAGTTATGAATGACA ATCAAAACCGATCGCTTAGAAACATGCATACATTAATTGACAACATCAAA ATGTGAACAAAATGCAATAGTGAaaccttttttctttcaaagcaaaccgC AAATTTCTTTATTCTTCCACCGGGGTGTTTTTTATAACAAATCCTGAAAA TTGCAACACCACCAACCAAATTCCTCCAATGGGGGACACGCGAAACAAAT CTACTCTTATAAATTTCCTTAGAACAAAAAGGGCATAAAAAAGGTAGCTC TGATTGAAAGTCTAAGTTCTGCTGCATTTATTAACCATTTATTAACATTT CACTTTTTTAGGGCACGGATGTTCGAAATCTCGTTTGCTATCAAAGCCAT ATCCACTTTGCTTTCGTCCCTCAAAAAGACAGTGGAGACACGACCAAATA TACGTAAGCTAGCTCTCATTACCCCCATttttactttaattggattaact ttcgcgagattaGATTTTGCgatttcgcaaatttttgccattttcgcgaa gtTAAAACTTGTGAGGttcctgactcgcgaaattaaaatccaccaaaaaa ttttgaaaatcgcaTTTTCGGTGGATAAACCAGTCCTAAGCCTccttttg tggcaaaaatggctatttctcagctgttttcaggcttattcgcgaatttt ttcaaaactccgACTAGCAAAATTAAATCGAGAAAATTTGCCTCATAAAA TTCCTCACATATAATAACAAAGAATCAAGTTATAGTCATTTAAGAGAATT TCTTAGTTAGGATCTATAATGATTATCATCCCCACCGACAAAGATGAAGT TGCGCATCTTAAATTTATCCGGAAGAATGTTAGAATCGGCAACCGCTAAG GACTacaatcatttttttataagaatggtgtaaatccaattcatcatgga tattcttaactttgtTGAGAAAATCAtcctactcttgtctcccgaataga cgtcacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatcatggacat tcttataaagtgtattcttattaaaaaaacgtgtatcatttAAACGAACT TCAGTCGTATTAtgtattgttttattttctcatttcagTGGATGCGACAC AGTGGAGTGAGGTGATTGGTTTATATCCAGTGATCTTAGAATGTGTCACG TGTACATCACATGACGTTCGAATCGCTCTCAAAGAAGCACTGTTGGAATT CCAAGACTTGCTGGCACCTCCTCACCCAAAAATGTGACGATATTTGAAAG CTTTCCTTACGCCTTTTGAATGGTCATTGCAGATAACAAATTGGAGTAAA AAATCTCACCAGGTTTAGCAGTAGACTGGAGCGAAGTGAAACCAAAGTAT TTGTTAGCGATAAACATGCATCCGTTTGGAACTTAAAGGATAAATGCATT ATTGACAAAACGTAAATCTAcgaatttttcagaaaagttcTATCCAATCC ACAATTTATGGTGGAGCTTCCAAGGTAGTGAAAATCGCAGGTAGAATGGG TTCATGTCTTGCGGCTTCTACTCCAGGTGATTATTATCTAATATTAGCCG CATACCGGGTATaaactgttttttataagaattgcaTAAATCGAGGTGAG CCTCGTCATCGGtgaacatttttaattttgagcCTTGAAATATTCTCTTA AGTAATAATTTTTCCCTTCATTTTTGTCTCGAACGTGCgaaaaaaaacac tcaaaagCAAAATGAAACTTACTTCTTTGGCATGAAGTTTGATTTGATTA GGGAAACATTCTAATAGGTATCGTATAATATTTCTACGGAGACAATTTTT TCGTTTCTCtcagttttttttggaattgcaCAGATTTCCTTTGTTTATTG GTAATAAATAgaaattttagttttgtttttaaaaatacgGAACCACCGTG AAATGTTTAGACCTTTTGGACAacaaaaaccattttttgccCTCTTTTCC TGATATTCTTGGCAAATTTTTAGTATTCGAAGTCCTCTTGAGAGAATTGG CGCTCGATTCCCTCAGTGTATTAATTTTGGGATGtacttaatttggcgat tggccgaAATATATTATTGGCAGGGGAGAAATTTTAAAGCTTGTATGATG GATTAGGTGTCTAAAAATAAACCCCTTCCTACTgtaaaaattggcaaaaa tatcgtccccggtggaaaatgatcctccaatttttgttcccactgaaaat aatcaaataaagcaatcctcactgcaaaatattatactatttttcccatc cccactgaattttctgacttgaaaatgagtaaattcAAATCCCCAGGCAT AAACAATGTAGTAATATCAATcctcatcgagtttcagtcccaCTGTTTGA ATGAATCCCACCGGAtcagtgagaagggggtgttaaaattaatacactta agGTATCTCACTTAATAATTAgcataattaatttttgattaattttattg ATTATTTCATGTTAAACATTTATAGCTTGattattttagtttagttttct tTTGATCTTAAATCGCAATTTCATGAAATCCTCATTCGAAACATCATTTA CATTCCCCATATTTTGAATTGTGAAATCGCACAATTTATTGCGATAAATG GATTTTAGGGGCATGGCATTTAGAATTAAtatttaaacaatttttataaa acttaactttattattttccaatgaaattattcaattttttttccttcta tttTTTGACAATATAGTAATGAACGAAATACGTCGAAAATATGAATGGTT TTTTTTGGAGAGAGTCtagaccatagatttataaagcccgaagggctaga tgttgtGCTTCGGCTGAAATATGTGTCGTGGTTAGGTAGAAAAtgctacc taggtcacgtgacgctacaatagaatttcagcgcttgaccaatcagaagc ttcgcgggttttcgaaaacaatagcaac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038980TCONS_00038980Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038980-proteinTCONS_00038980-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001981supercontigsc0001981:17310..28337 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.78 2.69 1.72 1.46 11.75 10.61 13.7 16.28 7.83 10.03 7.62 8.12 10.83 11.5 6.58 7.72 6.38 6.02 7.15 6.02 6.59 6.47 5.24 6.47 10.18 10.6 5.57 5.21 8.03 6.12