XLOC_023387 (gene) - C. hemisphaerica

Overview
NameXLOC_023387
Unique NameXLOC_023387
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001964:30746..39718+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023387 ID=XLOC_023387|Name=XLOC_023387|organism=Clytia hemisphaerica|type=gene|length=8973bp|location=Sequence derived from alignment at sc0001964:30746..39718+ (Clytia hemisphaerica)
GTTTGGTATTGCATATCTTATGCAAGGATTATTACAATCAGACGaatcga aaaaatttttcactgagGATGACAAACAGAGATTGGTATCGTATTGGAAA GGAACAACTACGAATTGTTTATCACAAGACAAAGATTACGCCGAAGCTCA ACGGCTTTTGAATCGCCTGATTACCATTGAGTTTACTACAATGGACGATG ATCAAACGTTACAGGATTATATGGATGATGGAGGTTAGTACAAAAAGTTC TGATTGGATAAGTTAGCCCTCAATAATGCATTAAGCATACAAAGAAAGCT atgcgaccgtagtgcagtggtagagcatccggctacggtgcgtaAGTTTG TCGGTTCAACCTTCAGCCGGGTCACACCAAAGATTcctaaaatggtactt gatgcttcagcaattaagggctctgaccaatTCATAAGATCGAATACGCA GAAATggagataaaacttttgtttttagtTCCTTGTCACTTTTAACGAAA AATTGTCCTTATAAGTTGTTTctgaatttattctatcaagagtaattAGT AATTAATTACTTGCAAAAAttacgttatgaactttaaaaagacgttaatg aatgttatattaccctcctttacaaaaagtgctaaatTTTAATGggtaac ctttttgtttcgatttttttaaagtGTCTGCAAAAGATTGAAGTATCtaa acattttctaaattgatgtttCAGAAGTTATGACTTTATTTGTgcgaaaa atttggaaaaaaaaataggtcaaaagccactattttcaatattttgagac aaagaagcttttacaaaagatttccgaaaatctattgttagtttggttaa agatGCCCCATCtagtgcaaaaaaattttcaaaatctttttcttcgcCTA AAATAAACTACTCAAAGTCGAAATACTTGTCTTCGCagatgtcttcattt tcttcttcttcaaattttttcaatgcagttgttgaattttcagattcagg aatagtttgtctaacagaaaatgtataacatgtcatagtTTTATTGGgca catcagtcagaaaacatattttaaacacgacaattataaaaaatatactt tGGCTAGAGCCCtcaagagaaggatcaaggatgAATTCAAGCGGAACAAT ttagggagaaagagtggcgccctcccctaccttcgggtagatagttatcg aaagaggagcattcgggtcacctccgactgcggtcacaGACTTACTTTAT GCGAAAATCTCAGCCAATCAGAGTTTTTTTTATCCTCGATAGTTCTTTTG TGCAAATTACGCAAAGTCAAAGCAGGAAAATAATAACTTATTTATTTGTC TATTTTAATCGGAAATCACACAGGGGGTCAAGTGAAGCTCTATTCCACCA GCCTGTAAAGTTTTTCTTGCCAGCCCGTTTCTTCCCCTTTtgaaaatgaa cttgaaaacaCTTGATAATGTTCTGGGACAATAGaacaaaattgatttga atCATTTTCGCTCCATTtttcccagggacaaaatcgcGGGTCTTTTAGgt ttttctctcaatttttgTCCAATGAAACGAATCCATCAGACatacacttt tttcttgtgctgGTGGTatatgagcccccccccccccaccNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNtccacgcattcacgcaaatttttctCA AGTTTCACGGAAACCCAATTTTTCAgacaatcaaaaaaaatttcaggaaa aatcagggaaacatTTGAAAACCGGGAAAATTGCACataatcggtggaaa aaagtggaGATTTACATTTTCACACGTACAAAGTGGCAtacattcacgca ttcacgcaatcagtGGACTTTCTAGTCAGTACCTTCACACaaaccaaata ttttctttgttcaATCGCGATAAAAAAAAGCAGTTTTCGTCTAGCAGGCT ATGGACTTTCatgttcacgcaagtttttctcaattcacgcattcacgcaa tttttttttcaattttcacgcattgaTGCAACCGAAAAAGCCCATCCACT CATTTAGGCAAACCGCTTAAGAGCCTCAGAGATGGAGCATGTTGCGTTGC GCTGATGgggaaaaaaacttctcgtgtccttAAATACGAGCGAAAGATAA ACTTTTCTAAATTAACGATAGCTTGGATTAGTTCAAATCATATAAACACT CTGTCCTTCTAGAAAACCATgtattgtaacacgcatgcgtaatttgtcgt ttttaaaccatatgtaattaattcccgtgataatcAAAGGGGAATGAAAA CAGGGCCCGCGCCAccgggggggccggggggggccatggcccctccacat tttgcaaagcaaaataaaaaatttctcttcacctaataatctttttcttt tctgtgcgcgtgccaataaaaacgttagaACCTTTCTAAGAGGTGACAGA TGGACACTTAAATAAGTCTAATTATactattttgtttaaaaaaaacaaac ttaacagttttctttcagaaaatcagaacaaaaaggaagctgttttagcc aaataagacaggtcaaaatcgaaaattttccggcccTCCTTTGTCACTAT ATTTTTGTTGGCCCCCTCAGTTTCAAAATCGTGGCGCGGGCCCTGGAAAA CGTAGAGGTGGCACATTTTCGGTCGGGGTTATGGATGGCGacatttgtcg ttttttatgaaatttgtcgttctttttgcctatttttagtaaatgcagga ttctttagataaacagTCTCAAAGATGCGAAAAACTGTAATAACCATGGT TCAAATTAGAGAGTCCATGTTCTTTGtttgaggaaaatttttttaagaga aATATCGTGATGCCTTGACAACTCAAGAAAACCATTATTTCGGTTGCCAA GGTCTTATAAACTCTGCTTCCCTTAGCCATAGGTCTCCAGGGTCGATGTG AGGAAACTGTGCAAGATTTCGGACCTCAAAAGCAACTTACATGTCAATTT GCAAGTTTATTTTAGTTAGCCTCTTCATTATTATACATAGGTGCAAAATG GGCAGAAAACCTTTATGATGTCATCAGTACACGCGAATCTATCCAAGACA TGGCGATTGCTGAGATCATCACCAAAGGAAGCAGTCCGTACCACAAGTAT GTCATGCTGCTCTTTTGTTTGGCGCCCGATACAGATCATGTGAAGGAGCT CCACACGGACATCGTGACGTACCAATTACAAGAATTGAATGAATACTTTG AAGGGACAGAACCAGAAATTGTGGACGAACAGATTAGAGACATTACCAAC GCATTCTTGTCAAAGCTAGAAAGTGGTAAGTGTCCTTTAAATATCTAGCC CAACTGACGTTTTTACTAACGCAATCTTGTCAAAGCTAAACAGTGGTTAG TGCACTTCTAATATCTAGCCTAGCCTGGTGTAAATAATGTTGATTCAACA TCCACCTGACGTTAGATGGACATCATGAATGTTAAATGGACTGTTACGAC GTTTCGTTTTTCAAATTCTCAAAACTGCTCCAAACTGATGAGAATGTTTT TGAGGTGTCTCCCTAACGGGCTCTTTAAAACGCAtttagtatgattttta agatttggccgttcagaaaaatcttttttcgtgccccttgctcttcggcg caCCTTTAAAAGAGTTCCGCTTGGTGGTGGAGCCACTTTGGGTGTATTGC TGGAATTGTTTGTGTTTGTAGACTCTACTTCTGCAATATCTTGAAAGAAT ACGCCAATTGACAAGCAAAGTGACGTCATCTTTGAAGCAGTTTTGAATAT CataaaatattttaggtgaACTAGAGGATTTCAACGAAATCAAAGCTCAG CTGATGGAACTAAAAAAAGATATGGGAATTGAATCAATGAACGAATTCCA GGAAACCTTTGCGACAATGGTCGCTAATGCTGTGAATATTGCATTCTTTG AAATTAAGGTGATaacatttatttattcattgtATTCACCATTGTAATGT TTTCTGACATTATGTCACTTTcacaacagctgattggttgcaaaaTCATC AAGCGAGACTTAATAATTTCGATATCCAATTTTCACGTTGAATACATGGT TTATCGCatcgagtttcaagcccgaagggctagagacgagactcctggat gggaaatgaaaccacttgtttcccatccagaacgcccgcgcttagttttt acacaaacgctggtttgaaactaaaatcatcgctagatttcaaaaaatgt agtcctccaaaacaaaggaaccgctagatacaatccgtcgtcatgattac ggtgTTTTCTATACGAGTTTTGGATGGtagcttcaatttcttttgcctga gaagggttgaagtttcgcctctagcccttcgggcttgaaactcaatggtt tatCGTTCACTAATTAGCAGAAAAGCATTTTACTTTTTAccattaatttt tcattcagtatttctctctttttatgaCATTCTCGAACGttttactatct tttttaaggatgtcaatttcattgttttttctgtttgtaaaattccaaat cacgtaatcacgcaagaaaaaggtCCCTATCGCGCCATCACGAAACCCGC TTGGAGGGGGGGGGCTCCTcaaggtatataataaaacatatatgttaaaa tataataaagagttgacacaatatctttgtttcaaactcagagtttcatg gtgcacaggcaccaatcttcagtgaaatgagATAACGTAtgttaaaatat atatattcaataggtttgcATTGGTTATTGaatttattaaccctcggtga taTGTATTTTGGGAGAATTgcatcacctcgggttaataagTCTCAATAGC CGacttttacccattgaatatctgcttgATATTCAACAGTGTGTTTGGTT AGAGGTGGAGGCTGACGTGTATTAATGTCATATTTTAAGCGACAATCTTG TTCTAAATGGTCCGTGGATCGTTAAAAAGGAATATTGATATATTGATACC AAATTTCATCCGAAATGAATATAAAGGGGTGTCAGTCATCCGACACGGAA TCATGTTGGAAGAAATATAAAACATTAACAGACGGAATGTTACATGGAAA AAACCCGTGCCCGTCTGGGACAGGCTAGATACAAAACTTCCCTACAAAGA AGATCGAGGGTGGCCCATGATGCTTCTGTTTGCGTCGGACCTGGTGGGTT GGGCTTTATGTTTTTGGTTCATCTTTAAACGAaatcaaaaatcttctttt agGAGGGTTCATTTAAAGGAAGACTTTGCCCTGCCGTCAAACAAGTATGC GACAATTACGGCATTACCTCGAAAGTCAAATTTATGGGTAAATGTGTTTT TGGATTGGCTTACGCTATGGGCTTCGTGAACTGTGTGCAAACATTGATGA GGtaattactttttttcgtttaaaGGTAGGTCTACACTTGCACGTGTTGC GGTCACACTTGCTTGGAGAATATTCANCGTTTAAAGGTAGGTCTACATTT GCACGCGTTGCGGTCACACTTGCTTGGAGAATAttaatacgtcataaaaa agaaatacacGCTTGAGTTGAATAAGCGAGTActtcaatacactcttctc gagatgcataaatttattgttgtcctcgttttcaaaaagatttcgttgct atgaaattatacatttaaaccaatttaaattcccaaaaggcaaacattaa ctctaaaagaaaagtacttgaaattcaaaatgtctcctGAGATGTAAACA ACAATATTATCATTGTGAAcgtgtaattttatagcaatgaaatctgtttg aaaacgaggacaacaataaatttatgcatctcgagaagagtgtattatcA ATAACTTTATTATATTGCTTCTTGGTGAATCACACTCTGATGACTtctcg accgcagtcgagacaaTAGATTTAATTCTAGCTTGCCAACTATCAGAATG CTCCCTTAGCTGTCTCAAGAATCCGAATTTGAGCCCAGTGTCCCTGCAGA TGGTATCTAGGGATGTCAATCTATTCTTGATTGAAGAATCAACTTTGGTT ATTCGACAACAGAAGAGTTGGAATCATATCGGAAATTAAAATTCGAATAT CGCAAAGCGGAACAGCTGTTACTACGTAGAAAAAAGCCGtaacgtctagt ataggctagagTTGagcgcattttttttttttcaactgttttAAGTCAGA TATTagattgcttcatttttttggCCAAGACCACGTGACGGTTCCGTATT ATTCagaaacaaaatgaagccattctgtTGGTTAAAAATGACGATGGCTC CAAAATTGTGTCCAATAGATTGGCTTCATTTCTTAATCTCCAAAAGTTTT AAGGCGTTTCCCACTGGTTAGGGCTAAAATGCTCATTATTTATTcaataa acttcatttttggtcaaatgagCTAACCAAGCTCCCACTCATTTTTGTGG GAACCAATATTCTCGGAACACTTATTTTCGCAGTGCGAGGGTACTAATTT GGTGCATTTttcggaactaatttttgcggctCACACCCACTTTTTCCCGA AATTCTTTCGTATTCCTAAGGGGTTTTTGAAGAGGATTTTTAGTAAAAGT CGCAttttgcggaactaattttcgcggtaacacccaaaaacgcgaaaatt agttcctgtGAAAACTAGTTCCCTTAAGCATGAACATGCCTTAAggtatt gatttttttgtttaggtGGGACACGTTGGCTGCCGACCAAAAAGCTTTAA TCACCGTTGATGCTATGCGATATGGTACGGAAATCATGAGAGCAATGTTC AGTATTGGTGATTATGTGGACGAAAGTTTCGTTAATGGAAAGTGGGATTG GAAAAATAACAAGCAATTTAGATCAGCTTGTGAAAACCTTGGCATTAGTG AAGGAAAACACGCGAAAAGTCTTCATTCTAAGTTTGATTGTaagttacac gcttttttaaaagaataacttctgtaagaatatcagggtgagatttcaga gttagaacaataggcctattgtttagaacaatagaaaagtaagaataatg ctcacccaaTTATGAGACTATTTTTGCACATaatacgttgtgtttcaagc aaaatgagtcaatTTCTTGTTTTAgccctttttataaaaatatacagtTT AACAGAGGAACAAACTAAAAAAGATAAGACTGtgatgaccaaaatgttga gaacaagttaagaacattcgaaggctttaaagattttggatgctcttata aaaaatcgtgtATCAATTCTTGTGGTTACCttctaaaaaacattttatct caatttttttcaccAGTTGATGAATCAATTTTTGAAGCTGATATGGCAGA ATCACTAGCAGACATTGAAGAAGCTGGTAAATTGGAAGgaagattcaaaa aatttttcaaactcggTGACgactttctaaaaagatttacAATGGTTTTA TCCGTTGCAAACACCGCTTGTCTTGGtttcaaactttacaaagattttaa agATGATGCTCCAATGTACCAAAAAGTCATTGATGGGCTTCAGGTTAGTT TTGGACTAATTGTAATTTAAAAGTTAATTCTGGATTCTTTCCGTCAAGAG TTATTAAGAAttgaattacaaaaatgacaatttcaACTAAGAGGACGTta ataaaatgttttattaCCTTCTTTCACATAgggcttagttttaatgggta attaacctttttgtttcaattttcatgaaTTGTCCGCAAAAAATTGAact atttggaaattttcagaaaatttttctaaattgccGTATCAAAAACTATG AATGCgtttgtatgaaaaattgagcaaaaaacactatttttaaaattttg agacaaaaaagccttcacaaaaattttctgaagatctatttttatttcaa ccaaAGATACACCATATACCACAAAAAAAGTattctaaatattttctttt caccGAAAATAAGATCTTCATCATTTCTTTTTCATCTCTTTGACGAACTC AAATTTTCGGCTTTATTCTGTCCTAACAGAATATGCATTACACGTCAAAG TTTTGTTCGCTGCTTCAGGCAGatattatattttgtacatggcaAATATA AGAAATTCACTATGGCCAGAGTTAATTCGAGTTTAAAAATTTATATGACC TAACAACCTCGTCTAAATTGGATCGATGTAGatcgtttaccctgtcaagt aGTGAAGCTATTGTAGGCCATTGTAATACTGTCTATCTTATTTCTAAATC AACTTATATATCCTAAGGAATAATTTGATATCACCATGCCGATGTAAGTA CTCAAAGTTTACTAGTTTTTAAATTATGATGTTTcctattttttatgttt tgcaGTTGATGGTTGGTATTGGCGAGATGGTTTTTGTAGTTTTGGAGTTT ACAACAGATCTTGCTTTTGTTCCAATCGTCGGTCAAGTGTTGGCAGTTGT TGGTGTCATCCTCGATATCATTTTACTTATTCTTGGAGCAACTATGAAAC AGAAAACACCAGCTCAAATCTTTATCGAAGGTGAAGGTCATGATTTCTTG CAAACCGTGGAAATTGATGAAGAAGTGCTTGAGGATGATGACGACAGTGA CAATGGTTCAGTGAGGAGCAAAATCAGAAGAATCAAAAATCGAATTGCAA GAAGAAATCGAGAATTGGTTGATAAGAAAAAACGATTGGAGAATGATCAA TAAGAAGAAATGAATGACGAACAAATAGAACAATGGACAATAATGGAAAA ATGGAACATTAGAACAAAAGAGCAATAGAACAATGGAATATTAGAACAAT AGAACAAAAGAACAATAGAACAATGGAACAATAGAACAATAGGACAGTAG AGCAATGTTGCAATGAAACGATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038920TCONS_00038920Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038920-proteinTCONS_00038920-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001964supercontigsc0001964:30746..39718 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.17 2.26 1.38 1.96 0.11 0.03 0 0.07 0.14 0.06 0.02 0.03 15.44 2.96 65.53 148.28 27.54 26.95 72.14 55.58 0 0.06 2.76 3.1 0 0.03 1.22 0.05 0.84 1.27