XLOC_023328 (gene) - C. hemisphaerica

Overview
NameXLOC_023328
Unique NameXLOC_023328
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001946:6919..10547-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023328 ID=XLOC_023328|Name=XLOC_023328|organism=Clytia hemisphaerica|type=gene|length=3629bp|location=Sequence derived from alignment at sc0001946:6919..10547- (Clytia hemisphaerica)
GAATGAATGTATCCTTTGTCAGAAAATCACCGATGAGTCGTTAAAAGAAC
CTTCAAAGAACAATAACAAGGCTGAAGTTCAAAATACGTATGAGAACGTT
GTCGATATTTTAAAACAATATCATCATGCTGGTGCTATGCCTGATTCTTT
TCATACTGGCGTGATAAACTTTATTATGAACAGTGATCATCCATCTATAT
TGCACAAGAACAAAGCGAAATGGCACAGCTCCTGTAAATCGAAAGTTACA
ATTAGCAAACTTCAACGAAAAAGAAAACATCAACCTGAAGAGCCGTCAAA
AGAAACTCGAAGTAAAGTTGCTAAATTTGAAAAGAACACCTGTTTTATCC
CAGGCTGTACTACGAAAACAACGGAAAATGAGCCGCTGCATGAAGTTATG
TCCAAAGAGCTTGACGCTCGTTTTCGAGAATACGCGTCCATTATGGATGA
CACAGAGTTATTGGTGAAGCTTGCAGGTGGTACGTTGATAACTTTAGAGG
CTAAATATCATAGTCCGTGCGCAGTAATGTACTTTAATCGTGTTAAGGCA
AAGGTAAGAGATGAGCAATCTACATTTCGAAAAATGAAAAACTATAGATA
TAGTGCCTTGCAGGACTTAGTCAACGAACTGGAAGAATCCCGTTATGATA
CCGAAACTAATGCGTTCCTCGTTTCAGATCTAGTCGAAAGATACAATAAA
AAACTCGCAAATATTCTACCGGAAACCCTAGGTGAGCCCCCAAAAACGCA
CATCACCCGATTAAAAGATGATTTATTGGCTGAAATTCCTGATCTGCAGT
ATCATAAGAAAGGTAAAACGGGATATTTGATCTTCAATGATAAGATTGCA
GGGCTGATCCATCAAGATTTTACATCCAATCAGGATGAAAACGATTCAAA
AACCTTAAGAGATGCCTTACGGATCCTTCGCCAAGACATTTTCAGTGTCG
AAAATCGCTTTAATGGCTCCCTTTCAGACAAGGATTCTCAAATCGATTCA
GTCCCCCTAACATTACTATCTTTCATTTGTCGCCTAATGGGAGGTGCTGG
AACAGAGGATGAGAACAAAAGCATTCCGCAAGCAACATGCACACTGACAC
AGCTTGTTTATTCCAACTCAGTGAAAAGACGTCGAAAGGACAGTGAAGGA
AACCCCCGCCAGCAACGATGCCGTGAAACACCAATAGGAATTTATGTTGG
ACTACTTCTTCACAATGCCACGGGTTCTGAAAGCTTGGTAGATGCAATGT
TCAAACTAGGCTTGTCAATTTCTTATGACAGGGTCCAAGAAATCCGAAAA
AACTTAGGGTCTCAGATTTGTGAACAATTTTTAGACTCTGGTGCGGTATG
GGGCTATACATTACCAAAAGATACACCAAAAGCCTATGGTTTCGACAATG
CAAACAAAATATCCTCATCTAACACTACTTCGGGAAGTGCCAACTTTAAT
GGAACCGTCATTTCAGTGTTCAGCTTCGGTCAATCGGACGAACCGTCTAA
AATCTTCAAAGTAAATGAAGGTGGTTCAAATGCGAAACTCGAATTGCCGA
AGTATTATACGGACATAGAGCCGGTTATAAATGAAAAACCAACTGTTCCC
TCCGTCGCTAAAAAGGATCTAACTGGTGACTCATCAGCAGTTCACAAAAA
TTCTTTGAATGCTGAAATTAAATGGATGGACAAAGTCCAAGACTCTGTCA
GAAAAAATACAACCGTTGAAAAACTCTCGAACCTATCATGGGCAGCTTAC
TTTGCCAGCAGAGAAGAACAAGTCAAGAAGGAAACAGTGACGAGTCAAAT
CTTACCAGTATTCATCGAAGAAGCCGCAACACCCTCAATGGTGAAACATT
GCCTGACCGTTATCTTGAAGTGCCATGAATATACGAATCCTGGTGAAGTC
CCATGGGTTACAGCTGACCAACCTTTGTATGCGCTTTTAAAGACAATTCA
ATGGCGTTTTCCTGAAACCCATGGTGAAGATAAACTGTTTGGCGTCATGG
GTGCGCTACATATCGAGAAAGCAGCGTGGACGTGTGTAGGGCAAGTCGAA
GACGGATCTGGGACTATCAGTCTCATGGCTGATGCCGACGTCTCAACAAT
TGGAGTTGCCGAATCCTGTCTTCATTGCTCACACATATCTCGTAGTCGCT
ACCTTAATACTGTTGGCGCTTGTGTCCACTACATGCTGTTGTGTGATGCT
TATCAAGAATACAAAGACCAGTTACCTAATGGCTCGGAACCGATCGATAT
GTTCAAATGGTGTGAAGAGCAGAAAAGCCCTATGTTTCGCTACCACTATC
TATTGCTAAAACTCAAACTTTTAGTTTTACAGTTTGTGAGGTCAGTCAGA
AGCGGTGACCAGAGTCTTTACCTCACCAGTCTAACGAAGATAACATATTA
TTTTTTTGCGTTAAATCATGTTCACTATTCAAGATGGACTCCAGTACATA
TACGTGATATGCTCCTCCTACCGGAAACCCATCCAGAAATCCATCACCAT
TTCGAGCAAGGTCGGTTTACAATCAACAAAACTGGAAGGCGTTTCTCCAA
CATCGGCCTGGATCATGGGCAAGAGCAGAACATTAAAAGGTTCAAAGAAC
ATGGTGGCCCGTTACCGTTTACGCATTCACCAGATCAGCTTCTTCTGTAT
TTGGTAGCAGGTCCTGAAGTTACTAATCAGGTCGCATTCTTCCAGAGCCT
AATGTCACCGGTAGCTTGTAGCACTGTATGTCACCACGAGCAAACAAAGG
CATACCAAAACAAGTTCATCGAACACACAAAATCTCTCTATTCTAAATAT
TTAGAAGTTGGCAATGTCTTTACAGACAAATCAAATGTATTGTTCGATTT
ATCAACTGATCAAGTAAAGCCACCTACTACGATCGACTCAATCATGTCTT
TAGAGTCTCGCGGTAAGGAACAGTACGAAACCTTTGTCAAGGACAGGCTT
GTCAAGCGGTAAGTCGATAATATATTCTTTTGCTAACTTATTCTCTACTC
CTGATCTATTAAACCTACTTTGGCTATGCCAGGCCGAGTAAGACCTTCAT
AACGTGTTTGTGAATATTCTTTCGTGTTGTTCAATATCTTAGATCTGTTC
CCATTACCGAGAAAATCCCGAAGAACAAACTGAGTCTCATGAAAGAGATA
AAGAAAGCTAAATCAAAAGCCCAAGACGTCAAAGACCTGAAGAACCTTGC
AGCCGTCTTATCGCAGCTTTACGTGGTCAGCCAAGTGCGTGGTGCAGATC
CAACGGAATTCTTCTCCCATGAAAACGTGCCAAATCCACCTTCAATTTCA
AAAGATGGTCAGTTGTATCATGGGACAAAGTCCGATCTTGCCGAAGTACT
CGGTGGCTTATCTTCAGAATGTTTAGCATCCGAGCAACCTACATCTGATG
CTGTTGTTTTAGATGGTCCAGCCATAATCCACATGGTAGCACCAAAAAAT
GGGTCTACTGTTGACGAGTACTCCAAAGTCTTTGCAGCTCATGTCAATTC
GTATTTTAATGATGTAAACAGAGTCGATGTTATCTTTGATATTTATCTAG
ATTCAAGTCTTAAAGAAGGTGTGCGAGAAACCCGTGGTACTGCCCCTTCT
CAGATCGTCAAAGGTACCACTAAAATTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038851TCONS_00038851Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038851-proteinTCONS_00038851-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001946supercontigsc0001946:6919..10547 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.3	0.31	0.45	0.41	0.14	0.22	0.27	0.32	0.18	0.26	0.39	0.34	0.2	0.31	0.22	0.88	1.01	0.57	0.9	1.04	0.47	0.53	0.42	0.69	0.17	0.14	0.68	0.61	0.49	0.64