XLOC_023265 (gene) - C. hemisphaerica

Overview
NameXLOC_023265
Unique NameXLOC_023265
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001923:10834..13642+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023265 ID=XLOC_023265|Name=XLOC_023265|organism=Clytia hemisphaerica|type=gene|length=2809bp|location=Sequence derived from alignment at sc0001923:10834..13642+ (Clytia hemisphaerica)
aaatttgttcaaaatataTACGAACTAAATAACGAGGCAAAAGTTTTATC
TTATGTGCTCGATAAAATTGAGGATCAATTAATTAAACGCAAGAAAATAT
TCAAGTACGTAGATAACGTTCCATAGAAGGGTGGGACACGACCAATGAAT
ATTTGCCCAAAGGTTTAGCAGATGATTCGGATAACGATTCCAAGCTTCAA
GAAGCAGAAGGTAGGTTCATTTCGAAAGAAACCACAAACAAGGCCTTGCC
AGCCAAGTGCCGCCCAAAAGAATCGCACCATCTCATCCAAACCAAGTTCA
AGGATTACCGATGGTGCCTCTGCCACAGTTGGTACAACAAAATTTTCCTC
AGCATGAAGTGggcataaaaattttcaagggCCCTTTTTATTTCAGTCCA
CAACATTAACAAGAGCCATCCAACCAGGTACTTAAACCCGCTTAACAAAT
GTTACATCTGTGGTGAACCAGGATATTGGAAGCAGCAGTGATCTAAAAAA
TCAGGAGATGGATAAGGCTAAGAATAATATATCATGCTTTGAAAAGAGTT
CAAGGGTTAAAGGGAGTTTGAGAAAACACGTTCAGTTTTGGAGGAAAGTT
TTAGAGGCTAGTCCTCATCAAGTATTGGCGTGTTCAAGGAATcagaatag
cttgttttttagACGATTGTTTGTCAATAGATTATTCAAGCGAGAGGGCA
gtagaaaattcaaattttgtgtCCGGTTGTTTAGAAAAAGCTGGATTTAT
AGCTAACAATGAAAAGTCACAATGGGAGCCTGTAACTGAGATTCAATGGT
TGGGTATACAggtcaatttcaaaaataaaacttactcTGTTTCTGCTTGT
TTTGAATAAAAGATCAATTAGAAAATATGAAGTACCacagttaaaaatat
tttcagatgctAGCGCCACGGGAATTGGAGCAATTTTAAATGATTATGtt
tgttataaaaattttacaacagaTAGGTGAGTGGAAAGTTCTACGTACAT
GGAGTTATTGGCTATTAAATATGCCATGGANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCGGTTGTTTAGAAAAAGCTGGATTTATAGCTAACAATGAAA
AGTCACAATGGGAGCCTGTAACTGAGATTCAATGGTTGGGTATACAggtc
aatttcaaaaataaaacttactcTGTTTCTGAAAAACCCATCAAATCTTT
ACTGATTTcacttgaaaacatttttcgacACCCAGCACGCGTCACAGCAA
GAGAGTTATCTTGTGTAGCAGGGAAAAATAGTTTCTATGAAATTCGTTTT
AAGAAATGTTATTCGTCTAAAAACTCGTTTGATTTACAAAATTAATAGAA
TCCAGAGTGTCTTGGGATAAGAGAGtaaatttgacattttatcACAACGT
CCTTAGGGAAttgttattttggaaaattaaacTTGCGTGATTTGAATAAA
AGATCAATTAGAAAATATGAAGTACCacagttaaaaatattttcagatgc
tAGCGCCACGGGAATTGGAGCAATTTTAAATGATTATGtttgttataaaa
attttacaacagaTAGGTGAGTGGAAAGTTCTACGTACATGGAGTTATTG
GCTATTAAATATGCCATGGANATAGAGAAGGGAGAGTTCAACGTACATGG
AGTTATTGGCTATTAAATATGCCATGGAGTCGTTTGACTAGTTTTTAGAC
AATAAAACTATTTTGTGTCATACAGATAACATAAGTACAGCCATAATTGT
CAGGATTGGCAAGAATTAAAGTTTGTTACAACAGTTGGCAAATGATGTAT
TTATGATTTGTAAAAGGAAAGATATCAAATTGACAGTGACTTGGATTGCT
CGAAAATACAACGAGAAAACAGATGAAGTAAGTAAAACAGAAGATAATGA
CGACTGgtttataaaacaaaaattttgcgaATGCGATACAGAAAATTGGG
GCAAAGTAACGATAGATTTATTTGCCGACAGTGTCAACATGAAGTGTGAT
CGGTTTTGTTCCAAGTATTTTTGTCCCGGAAGTTTTAAGACAAAGATGCT
TTTTCCTTTGATTGGACAGGAGAATTTTTTCATATTGTATCACCCATCTA
GTTAATTAAGCAATTAAGCATTTTCTAGCTTCTAAAGGGAGAACAAAAGG
TGTTTTGATCGTGCCTTACTGGACTTCAGCAGCCTAGGACTTCAGCAGTA
ATTTGGCCATTCCGTTTCACGTTTTTCTAATTGATAatcattttattcaa
atttcgTTACAAGGAGGAGCGTTCTAATTCTAACAATTTTACTTTAAGAG
TTTTTAACATCTACAcagattttaggaaaaacaaaCGCGTCGATTACATG
CTCAACAATCAGGGATGAGTTGAAACAAATTTTGGAATTCGTGGTTTATC
ACAAATCGTTATATTGGTTGCACAGGAGTTTAAGGTCAGCAGCTGTGTTC
GAAGCTTCTAATTTCAGTATAAAGAAAGGATTTTTGACGAAACATGGACT
TTGACGTCCGGAAAGTATCAAGAATAGATATATATCATAGAATATGGAAG
TTTATTATACGTTTCTAGAAATAAAGGGGTAATTAGCGttaattattatt
aatttataaAACTATTCTTCCTCAGTTCAAGCAAAGGCACACTTTGTCTC
ATGCTCTTAGTCGACAGGATTTGGTACGGCTCCTACTACTACTAGAATAC
ATTAAATCTGTCTCGAAATCGAGATTTCGGTTGTTGTTTCATcgtgtttt
caattttca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038761TCONS_00038761Clytia hemisphaericatranscript
TCONS_00038762TCONS_00038762Clytia hemisphaericatranscript
TCONS_00038763TCONS_00038763Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038761-proteinTCONS_00038761-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001923supercontigsc0001923:10834..13642 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.79	32.46	19.33	15.37	3.87	2.41	11.34	7.69	2.03	1.84	2.65	1.1	1.03	0.79	0.96	1.12	0.73	1.85	3	1.77	2.71	2.95	4.88	8.69	0.33	0.85	2.26	2.91	8.96	6.22