XLOC_023112 (gene) - C. hemisphaerica

Overview


Name	XLOC_023112
Unique Name	XLOC_023112
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0001875:4055..11524+

gene from alignment at sc0001875:4055..11524+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_023112 ID=XLOC_023112|Name=XLOC_023112|organism=Clytia hemisphaerica|type=gene|length=7470bp|location=Sequence derived from alignment at sc0001875:4055..11524+ (Clytia hemisphaerica)
TTTTCGTGTGTATTTTACCGAATAGTCCCGCGCGGCTTTTTCTTTTCTAC
GCGCGGAAAtataaaccaaaaaaaatatgGCTGTATGTCTCCTCGTGTTA
CAATGTATGAAAACAAGGACTCAAATATGAATAGAAGACTCCTAAAAAAA
Tgctttaattatttttatttttcctaataaataaaatatgattgttttaa
aattattatcTGATTTTAAATGGATGTAAATTTCGAAATTATTGTTCTAA
GAAATAAAACAAGTCTCAAAGATTGGTCTGTATTTTATTACCCTTTTGTT
TCCACCGCGAAagccagaaaaacacaaaaacacaagtaaatttttttcaa
catcTCACACGTGCGTTTGTAATATCTTCTAGAAGCCTTATTGAATTTTA
TACTCTATTTACTGATTATACGTTGCTGGACACTGCTTTGGACAAAGGAC
TCGTTTAACTGGAAATACTTTGATACTGATATTACTCGTTGCTGCGCTGG
ACACTGCTTTGTACTAAGGACTCGTTTAACTGGAAATACTCTGATACTGA
TATTACTCGTTGCTGGACACTGCTTTGGACTAAGGACTCGTTTAACTGGA
AATACTCTGATACTGATATTACTCGTTGCTGGACACTGCTTTGGACTAAG
GACTCGTTTAACTGGAAATACTCTGATACTGATTATTGTACGCTGTTGCT
GGACACTGCTTTGGACTAAGGACTCGTTTAACTGGAAATACTCTGATACT
GATATTACTCGTTGCTGGACACTGCTTTGGACTAAGGACTCGTTTAACTG
GAAATACTCTGATACTGATATTACTCGTTGCTGGACACTGCTTTGGACTA
AGGACTCGTTTAACTGGAAATACTCTGATACTGATATTACTCGTTGCTGG
ACACTGCTTTGGACTAAGGACTCGTTTAACTGGAAATACTCTGATACTGA
TAATACGTTGCTGGACACTGCTTTGGACAAAGGACTCGTTTAACTGGAAA
TACTCTGATACTGATTATTGTACGCTGTTGCTGgaatactttgaattttt
ttgtgtttatttGAAATGGCTGCTTCTTCATCATCTTCAGCACTTTTGTC
ATCCAAAGCTATTGGCAGTAAACGAGGAAAGGGGGCTTGTGATGTTTGTC
ACAAGGAATACACAAACAGAAAGAAACCAAAACTTTGTGGTTGCGGACAT
GAAATCGGTGGTTCTTTTGTCGAGAAATTGAAGAATCCATCATGTCCAGC
AAGTGTAGAGATTTACAATACGCAAACTTCTTCATTTCGGTCGGTTAAAT
TGACTCCAAATGATGACAGAAGCTTTGTTTATGTGCAGCAGGACAATAAA
ATTTGCTATGCAGGTCCTTGCAAGTCATCAAATGaacaatcaaaaatttc
tcaaatgaaATTCACTTGCAAACATATTGAGAAAGATGCAATCAACCCTG
TGTATCAGGTATCATTTTCTGAAGATAAAATCAGATCTTTTACCCCAGAT
ATTTCTTTGGCGGAAGAAATGATTTCTGTCCAAAATTCAACATCACTCGG
ACCCACTGTATCTAAAGTATCTCACAAGTCATATGCTGTCAAGTCAACAG
TGACTACCACTGCAGAAATGGGTTTCAGCCATGTGATGGAAGTCACAAAT
AAACGTACCAAAGATTCACATTTGAAGTGTTTGGTAAATGAATGCAAAAG
GCCAAAAAAGAAGTCTAATCATACAAAGACAgtaagtgaaatatttcaaa
atacatgtttttatacacgtttttttttattagaacccagttaatacagt
gaggctggaacctcgatttttgaggattacgattttaccagctttttagc
gatttttgcctcgctgaCCCAAATCTCGccacctctttaccttaaaggaa
gatcgaaattaaagtttttcagcgttccgaaaaaaacgctaagcaaaaat
tttttcatcttcacatgatcgattctaaacaacaaaatacatcttttggt
ctttgggtttgtttctgacctttttccttcaaagaatattgatcactttc
attttccccTCGAGCGtgcgagaaaaaaaagattagctcgcattctcgcg
cgggtgaataaagatgaggcggcaatcttgcactgagggtgctacttagt
ttccgccctattttgtgtccacaatagaatggtccaaatacgggggtatt
ccaaatgataaacgatgtcgttTTGTAGGGTACGAGTAAGTGCTTATTTt
ctaagagatacaaatagtatattgaatattattaacttatttatttaagt
atttttgagcccaaatttaaatatctggttaaatgaaaaacaaatgatag
cagttctgtttttcctcaaacccccgggaaaNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNAACTCCATCGAACAATCtcagttcgattaaaaaaattatc
aaaccTAATTGaacacaaatttgatttttgcgACTGTGGCGGCACTAGTT
TGCTATAATTAGGACTATGAATAATTTAaagctactgaagttgagccctg
TGTGAGACACACATTcaactaccttaagtggataaattttagcgggaTTA
AATTTGGTGAATTTGGTAAATCCAAGCCAAAAACTTTAGAAACAGATCAC
TCTGTAAATTAAATCCcctccaaattaaaaaaaaaagaatattatgtgaa
aaatgactttttagtatattttacaGTAACTTTACCCATTTTTATCATCA
ATCgcccaaattaaatccacgtcAAAATTAATCCACCTAAGGTAGGTTAT
AAGGTAATACTAAATCATGTTGCAAAAAATGATCCCTTTTTGATGAAGAG
AAGTctcttaaaaacatttttctacaTTACACaaagtaaatgttttttct
cacTTAGGTTAGTGGAAAGAAGGTGTGCGTGCATCTTCATTTAGTCATTC
TTGCCAGACAAATTTGTGAAGGAATTTATGATGCCAATGTTGAAGAAACA
GACCATGACAAGAAAGAagtggaaaatgaaaataaaactgGTGCATCTGA
AACACCACACTATGACAGCACTgtcaaaaaattgatgtcaaACACAATTC
CTTACAATATTCCACCAAATGTTGTTCGTTTAAGTGACCAGATGGTTGTT
CCAGAACAAGAAAGACTTGTATTTGAATCTAAGGAGAGCGTTTGTTCCCT
TTGCCAAGGTCAACTTAGTGAATCCATGTATCCACAAGGATGTAATTCNN
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NNAGCTGCTTGTTTTTCCCGACAGGCGGGGGGGGAGCTCTATCTTGGGGG
ACCTGCATTAGTTTATGTAACTCTGGGGGCTAAATAacacttcctaaata
tttttctttactgttggtttttaatttctctaaaccttcatgttttcatg
taaagtgtgatctgatccttaaaatgcaaatatgaagacattctattgca
ttctctaaaagtgcacacacatgtaaatagagctttgtgaatgccataaa
attttccccctatactgggacctaaaattttatcaggctggggggaccta
aatttggcgggggacctagaaccccagtcggagccatgcAATGGAACAAT
CAAACTCCATCGAACAATctaagttcgattaaaaaaattatcaaaccTAA
TTGaacacaaatttgatttttgcgACTGTGGCGGCACTAGTTTGCTATAA
TTAGGACTATGAATAATTTAaagctactgaagttgagccctgTGTGAGAC
ACACATTcaactaccttaagtggataaattttagcgggaTTAAATTTGGT
GAATTTGGTAAATCCAAGCCAAAAACTTTAGAAACAGATCACTCTGTAAA
TTAAATCCcctccaaattaaaaaaaaaagaatattatgtgaaaaatgact
ttttagtatattttacaGTAACTTTACCCATTTTATCATCAATCgcccaa
attaaatccacgtcAAAATTAATCCACCTAAGGTAGGTTATAAGGTAATA
CTAAATCATGTTGCAAAAAATGATCCCTTTTTGATGAAGAGAAGTctctt
aaaaacatttttctacaTTACACANGATCCCTTTTTGATGAAGAGTAGTC
TCTTAAAAACATTTCTCTACATTACACaaagtaaatgttttttctcacTT
AGGTTAGTGGAAAGAAGGTATGCGTGCATCTTCATTTAGTCATTCTTGCC
AGACAAATTTGTGAAGGAATTTATGATGCCAAAGTTGAAGAAACAGACCA
TGACAAGAAAGAagtggaaaatgaaaataaaactgGTGCATCTGAAACAC
CACACTATGACAGCACTgtcaaaaaattgatgtcaaACACAATTCCTTAC
AATATTCCACCAAATGTTGTTCGTTTAAGTGACCAGATGGTTGTTCCAGA
ACAAGAAAGACTTGTATTTGAATCTAAGGAGAGCGTTTGTTCCCTTTGCC
AAGGTCAACTTAGTGAATCC

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00038529	TCONS_00038529	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00038529-protein	TCONS_00038529-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0001875	supercontig	sc0001875:4055..11524 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.56	0.28	0.24	0.32	0.81	0.68	0.52	0.37	0.39	0.72	0.76	0.65	0.44	0.53	0.9	0.46	0.46	0.59	1.13	1.03	1.49	1.04	0.38	0.74	0	0.02	0.42	0.14	0.28	0.13

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XLOC_023112 (gene) - C. hemisphaerica