XLOC_022617 (gene) - C. hemisphaerica

Overview
NameXLOC_022617
Unique NameXLOC_022617
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001738:16012..21579+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_022617 ID=XLOC_022617|Name=XLOC_022617|organism=Clytia hemisphaerica|type=gene|length=5568bp|location=Sequence derived from alignment at sc0001738:16012..21579+ (Clytia hemisphaerica)
ATTAAAGCaatttcctatattttttcTATTCGTAGGTTTATGACTATCAT
GTTTTATTTGGAGAAACCTGAAGAAGGTGGAGAAACGGCTTTCCCTGCCG
CTGATAACATCACTTATTCAGATGCTGTAAGTTTTCTCTTTTCCTCGATT
AGCTCAAAGgttttcacactttttacacccttagcACTTTCTCCNTTTTC
CTCGATTAGCTCAAAGTTTTTCAtactttttacacccttagcACTTCTCC
CATCTTATTTCATTACAATTTTTACAGTGTGCGTCTCACGCGCGTTGTAT
TTTGCGCAAGGCTTAAAATGGgacagatttcgaaaaataaagatttgata
GATTTagagatttgaattttttcttaaaatgtcACCACTtctttctgaaa
gaaaaagaacacatcgttgatttttctattttttaaagagAAAGAAATAT
CTTAATGGTCTCTAGTGTTGGAAACTTCATCAACTTATTTTGAATTGACA
GGAATTTCGTCGACATGGTTATCCAGCAAAAGATTTATTCAACTTGAACG
AACATTGTTACGATTCAAATCTTGTTGTGAAGCCCCAGAAAAGATCAGCT
GTAGCCTGGTATAACCATCATGTTGATGCGAACACAGGCTGGTTGGGAGA
GATTGATGATTGGTCTTTACATGGTGGTTGTGAGGTGCGCAAGGGTGAGA
AATGGATTGCTAATTTATGGTTAACAGCTCCTTATGCCGGCGAAGAAATG
AAACTGAGTATGTATTCAGCAGAATATATGGAAATGATGAGGGATAGAGG
TGAAGATCTATATTAAATGAACTAAAATCAATTTAGTGTAATGTGATGAA
CAAGATAATCATATTACTTAAATCTTTATAAATAATGAGTAGAATATATT
AGTTtaaaattcgatgaaaataaAAGTTCGGATCGTATCTTAACTTTAAA
AAAGGCCTTTGGCACCGGAGGCGCAAACACTCCCCTTCTAATGCACCCGA
CAATTTTCTTCGAGGAATACACTATAATTCTTTTCATTTCTCGATGCTAA
CGGAAGTGTGGTGTCGGTCGGGTGTAGGAAATTTTATAAAAtcgggctct
tccagaaaatgtccgtacattgGGGGNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTttggttagcaga
ttttttgctaagttcggaacggttttgtgagcctgattcgcatcccctat
atcaaaacttatcagaggggatgtgggCAGCctagggtggaggatatatt
gtcccggcgtggggtagcgaaaaatcatcaaaatttgccttgtggggtaa
atttgctctgtctggggggtcaactgatgcttgtccggggggtaaaaccc
gttttctgggtCACTGGAAAtcgttatatcctccacccaccccccatatt
caatttttttctggccaTTCATGGTTTAGTAGAATTGAATATTCTAacct
ttagaaatttttaaatacaaaaaGCTTTATGAAATTAATATGACTGAAAT
TTGTGTAGGTATATTTCTGAATGATGAAGTTCGAATAATGACCTCACTCA
CTTAACTTACTCTTGAGTAAGTATACTTACTTTTGAGTTTTCAAGACAAT
TTGAAACctcattacactttttttataagaacatccaaaatttttgaagc
cttcagatattcttaacttttcgggttctaagcctaaaaatgttcttaac
atgtttttgtCTTCACCATgttttaagtattttttgtccattttcctgat
AAATCAAGTGTTTTCGAGTCCATAAAACCATAAAATGTttataatatttt
ggtcatcaaagccttatattcttattattattcttatttgttcttataaa
aaacatgtacttaaACTTTCACtcattttactcattttcttcCACTTGAT
TACTTTTTCAACAATCACAAAACCGCTATTAAATTCAAAtgcaatcaaaa
gttacagcctctTTTTGTCTCCGACTTTAATTTAAAGGCTCTGAagtctt
gttttttttaatgtttattttcgCACACAGTATATTACAACATGTGGTCG
TATTTGGTAATTAATTGATCGATATAAGCCCCCCGAATGAAATACTTGAA
ATACGTGAAGTTAAGTGAGATTTATATGACCTCGATAGCTTTGTTTGAAA
CGACATTTCTGATGGtaactttctttaaaaaggGTTCAATATCCATTCTA
GCGATTAACCATTCGATAATTTTCCGACAGATGCTTAGGATGCTTACAGG
CACTAACCAAGGATGCTCTTCTATAAGCATTCAAATACCATTAGAACTTA
GATTCTTGACAATCTTTCTTTCAATATCGATTCCATCCACTTTAATTTTG
CGTTTTGTTTCGATCTCACCATTCCGACACATTTCAGGTAACTCGTCCAA
AAGATTTTGAACATGTCGTTGATATGATTTTTCTGTTTCCTTGCCATCAA
ACTGAATATCAAATTCTATCTTCCGAATATTCTGCTCATTTTCAATATTG
TTAATCGGAGCTTCATCAATGTGGCTCAAATCAATCCAAAGTTTGTATTT
GAAAGTCTTATTTTCTCTCTAAATGACTTTtcttgttttacaaaatttcc
aGATCGGTTTTGGTTCTCTCACTTCATATTTTGTTATATCTTCCAGGCGA
TACTCCTatgttttgtttgattttatctTCCCAAGCAATCCCTCTTTTAT
GGCTTCCTCTAAAATGTAATCTTAAATCCTTATTGCAACATAGCATAATG
GCTGCTATAGCTACATGAAGGAATGAGAAAACAGACCATGttccaaaaaa
agatttcataatCGATGACTTGACACAAATTGTTCCAATCAAAGATGAGC
AAAACTCTAAAACCGAGACAAAAAGAAGTTTGATATAGCAAGTCACTGGA
TTTGGTTGAAGAGAAATGACGAGTTTTGGCAAGAGGGATAAAGAAGAAAG
ACAGTGAAGTAGGCAACCGATTGCCTTGTGCAAGTTGGACCTACATGAAT
GGTTTTGTCGTCACCAACAAATCAACCAGCCGTAACCAGTTGGATTGGGA
CTCACTTCAGTGAGGGGGGCCGGTGCGTTATGGATACCGTCGAGAGGAAG
GCCCCGAAACGGAACGCATTCTCTCCTGATGACCCATGAAGACTGGATCC
GGTATGCGGAGCAATGTGGCTGGCAATCACTTACCAAGGTAAGCTGTTAT
TCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGAACATTGTTACGATTCAAATCTTGTTG
TGAAGCCCCAGAAAAGATCAGCTGTAGCCTGGTATAACCATCATGTTGAT
GCGAACACAGGCTGGTTGGGAGAGATTGATGATTGGTCTTTGCATGGTGG
TTGTGAGGTGCGCAAAGGTGAAAAATGGATTGCTAATTTATGGTTAACAG
CTCCTTATGCCGGCGAAGAAACGAAATTGAGTATGTATTCGGCAGAATAT
ATGGAAATGATGAGAGATAGAGGTGAAGATCTGTATTAAATGAACTTGAC
TTATTTTAGTGTAGTTTGATGAACAGGATAATCATATCACTTAAATCCTT
ATAAATAATAAGTAGAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00037926TCONS_00037926Clytia hemisphaericatranscript
TCONS_00037927TCONS_00037927Clytia hemisphaericatranscript
TCONS_00037928TCONS_00037928Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00037926-proteinTCONS_00037926-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001738supercontigsc0001738:16012..21579 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.37	0.62	0.29	0	2.92	3.06	18.37	20.32	10.23	3.92	21.05	12.64	13.37	10.34	18.46	29.41	14.04	13.87	13.78	13.88	6.74	7.43	10.56	6.49	7.72	14.26	2.37	1.02	0	0.65